| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,710,331 | A→C | 9.4% | intergenic (‑74/+103) | kdpF ← / ← PP_4162 | potassium‑transporting ATPase subunit F/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,710,331 | 0 | A | C | 9.4% | 605.8 / 3.2 | 225 | intergenic (‑74/+103) | kdpF/PP_4162 | potassium‑transporting ATPase subunit F/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (121/59); new base C (3/25); total (125/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.28e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 230 total aligned reads displayed.
GCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCTCCAGTCCAGCA > NC_002947/4710183‑4710480 | gcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGAt > 2:2484824/1‑150 (MQ=255) cgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATc < 1:4483487/150‑1 (MQ=255) agcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCTGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCggg < 2:5232182/150‑1 (MQ=255) agcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCggg < 1:8564568/150‑1 (MQ=255) agcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCggg < 2:8538404/150‑1 (MQ=255) agcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCggg < 2:3656572/150‑1 (MQ=255) gcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCgggg < 2:5528754/150‑1 (MQ=255) gcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCgggg < 2:6959940/150‑1 (MQ=255) gcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCgggg < 1:1813228/150‑1 (MQ=255) gcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCgggg < 2:8450389/150‑1 (MQ=255) cagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCggggg < 1:5132208/150‑1 (MQ=255) cagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCggggg < 1:8081465/150‑1 (MQ=255) gcgcCACCAGCAGATAAACCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggt < 1:1863407/150‑1 (MQ=255) gcgcCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggt < 1:5758644/150‑1 (MQ=255) gcgcCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggt < 1:7613267/150‑1 (MQ=255) gcgcCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggt < 1:3609085/150‑1 (MQ=255) cgcCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtg < 1:4091450/150‑1 (MQ=255) gcCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtgg < 2:3365811/150‑1 (MQ=255) ccaccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtggg > 1:4194196/1‑150 (MQ=255) ccaccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtggg < 2:2160074/150‑1 (MQ=255) ccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGgggggtgggggt < 1:2653707/150‑1 (MQ=255) cgcagATAAACCGCCAAGGCCACTGCCAGCCGCAGTGACCGCCCGTCGAGCATTTTCATGTGTGGACCTCCCCGTTTTACGGCTTGGGCCGCTTTGGGGAATTTGTCCGAGGGAGAGGCGTAACGGGGCGAGATCGGGgggtgggggtgg < 1:6284365/149‑1 (MQ=255) agcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACCGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAACGGGGCGAGATCGGGgggtgggggtgg < 2:1141224/150‑1 (MQ=255) agcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCAGGGGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGgggtgggggtgg > 2:2445681/1‑150 (MQ=255) gcagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGggtgggggtggg > 2:2038050/1‑150 (MQ=255) cagATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGGGGgggtgggt > 1:82364/1‑150 (MQ=255) agATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGta > 1:544270/1‑150 (MQ=255) taTAAAACGCCACTGCCACTGCCTGCTGCTGTGACCGCCCGTGGTGATTTTTCTTGTGTGGTTCTCCCGGTGTTAGGGCTTGGGCGGCTTTGGGGAATTTGTCGGCGGGAGCGGCGTAAGGGGGCGTGTTGGGGGGGTGGGGGTGGGtat < 2:2826125/149‑1 (MQ=255) gATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGtat > 2:6801742/1‑150 (MQ=255) gATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGtat > 2:7076276/1‑150 (MQ=255) aTAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGtata > 1:6158500/1‑150 (MQ=255) aaaaCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCAGGTGCAGGGGGGGATCTCCCCGGGTTACGGCGGGGGCCGCTTGGGGGCACTTGTCCGAGGGAGAGGCGGAAAGGGGCGAGCTCGGGGGGTGGGGGTGGGGCTaaa > 2:4357208/1‑150 (MQ=255) aaCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGa > 2:3419405/1‑150 (MQ=255) aaCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGGGGGTCTAAAGa > 2:7357867/1‑150 (MQ=255) aCGCCATTGCCACTGCCAGCAGCTGTGACAGCCCGTCGAGATTGTTCTTGTGTGGATCTCCCCGTGTTACGGCTGGGGCCGCTTTGGGGAAATTGTCCGAGGGAGTGGCTTAAAGGGGCGAGATGGGGGGGTGGGGGTGGGTATAAAGaa < 1:7119587/150‑1 (MQ=255) aCGCCAATGCCAATGCCAGCTGCTGTTTCAGCCCGTCTTGCTTGTTCTTGTGTGGTTCTCCCGTTTTTAGGGGTGGGGCCGTTTTGGTGTTTTTGTCGGTGGTTGAGGCTTAATGGGGCTTGTTGGGGGGGTGGGGGTGGGTATAAAGaa < 2:5621550/150‑1 (MQ=255) gCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATg > 1:1766868/1‑150 (MQ=255) gCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATg > 1:3489542/1‑150 (MQ=255) aaTGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTCTAAAGAATGCGt > 2:6327555/1‑150 (MQ=255) aaTGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGt > 1:142503/1‑150 (MQ=255) aTGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTa > 2:7379483/1‑150 (MQ=255) aTGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGGGGGGGGGGGTCTAAAGAATGCGTa > 2:8499968/1‑150 (MQ=255) tGCCTGCAGTTGTGACTGCCGGTGGTGCTTGTTCTTGTGTGGCTCTCGGGTTGTTTGGGCTGGGGCGGCTTTGGGGTATTTGTCGGTGGTCGCGGCTTTCTGGGGCGTGTTGGGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCa < 2:2064236/150‑1 (MQ=255) tGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGATTGGGCAGATTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCa > 2:875218/1‑150 (MQ=255) ccAGCAGCAGTGACAGCCCGTCGAGCATGTTCAGGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGc > 1:1292498/1‑150 (MQ=255) agcagcagTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGCGAGCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCgg > 2:3685189/1‑149 (MQ=255) gctgccgTGACCGCCCGTGGTGATTGTTCTTGTGTGTTTCTCCCGTTTTTTCGGGTTGGGCCGGTTTGGTTATTTTGTCGGTGGTTGTTGCTTAAGGGGGCGTGTTGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGtt < 2:6644344/144‑1 (MQ=255) gcagcagTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGtt > 1:6486100/1‑150 (MQ=255) agctgTGACTGCGCTTCGTGCTTGTTGTTGTGTGTTTCTCGGGTTGTTCGGGCTTGGGCGGATTTGGGTAATTTGTCCGCGGGTGCGGCGTAAGGGGGCGTGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTtgt < 1:835239/150‑1 (MQ=255) tctgTGACCGCCCGTAGTGCTTTTTCTTGTTTTGATCTCCGCTTGTTAGGGCTTGGGCGGCTTTGGGGATTTTGTGCGAGGGTGTGGCTTATTGGGGCTTGTTGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTtgtg < 2:7819745/147‑1 (MQ=255) gcagTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTtgtg > 1:6231629/1‑150 (MQ=255) agTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGt > 1:5179288/1‑150 (MQ=255) gTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTGGTGGTc > 1:4999419/1‑150 (MQ=255) gTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGAGCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTc > 2:7291189/1‑150 (MQ=255) aCAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGAGTTGTGGTCTGc > 1:5987752/1‑150 (MQ=255) gCCCGTCGTGGTTGTTCTTGTGTGGCGCTCCGGGGGTTCGGGGTTGGGCGGCTTTGTTGTCTTTGGCCGTGGGTGTGGCGTACGGGGGCGCGCGGGGGGGGTGGGGGGGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTg < 2:5991157/150‑1 (MQ=255) aGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAACTTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGcc > 2:4581340/1‑150 (MQ=255) cATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCctc > 1:5682805/1‑150 (MQ=255) tgtgtgTCTCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAACTTGCCCGCGGGTGCGGCGAACAGCGGCGCGCGGGGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCggg < 1:5256066/150‑1 (MQ=255) tttgGTTCTCCCCGTGGTACGGCTTGGGCGGCGTTGGTGAACGTGGCCGAGGGCGCGGCGTAACGGGGCGAGCCGGGGGGGGGGGGGCGCGAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCt < 2:5788227/148‑1 (MQ=255) tgGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGACATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTg > 2:5905862/1‑150 (MQ=255) gATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGcc > 1:4915005/1‑150 (MQ=255) ttcgcccgGTGTGCCGGCTGGGGCGGGTTGGGGCAATGTGTCCGGGGGCGAGGCGTACGGGGGGGCGAGCGGGGGGGGGGGGGGGCTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGccc < 1:5969261/146‑1 (MQ=255) acctcCCGGTGTTCGGGGTGGGGCCGCTGTGGGGACCTGGGCCGCGGGCGCGGCGGACCGGGGCGCGCGCGGGGGGGGGGGGGGGGCATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGccc < 2:4079786/148‑1 (MQ=255) tcCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCcgcg > 2:4383824/1‑150 (MQ=255) ccccGTGTTACGGCTTGGGCCGCTTTGGGGAACTTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCcgcgc > 2:3028963/1‑149 (MQ=255) cccGTGTTACGGCTTGGGGCGCTTGTGTGAATTGGTCGGAGGGTGAGGCGTACTGGGGGGTGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCAAGCCCGCGaa < 2:7146555/150‑1 (MQ=255) cccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaa > 1:864196/1‑150 (MQ=255) cccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaa > 2:4837904/1‑150 (MQ=255) cccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaa > 1:6079300/1‑150 (MQ=255) cccGCGTTCCGGCGTGGGCCGGTGGGGGGAATTGGGCCGCGGGCGCGGCGTCCGGGGGCGCGCGCGGGGGGGGGGGGGGGGAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCAAGCCCGCGaa < 1:7765227/150‑1 (MQ=255) ccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaaa > 2:1536464/1‑150 (MQ=255) gtgtTCCGGCTTGGGCCGCTTGGGGCAAATTGTCCGCGGCTGTGGCGTAACGGGGCGAGAGGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGaagag < 1:2484824/150‑4 (MQ=25) gtgtTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAgg > 1:3067308/1‑150 (MQ=255) gtTTCGGCTGGGGCGGCTTTGGGTAATTGGGCCGCGGGTGAGGGGTAAGGGGGGGTTCTCGGGGGGGGGGGGCGGGAATAAAGACTGCGTCAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGc < 2:7552453/150‑1 (MQ=255) gtTCCGGCGTGGCGCGGTTTGGGTACAGTGTCGGTGGTCGAGGCGTACCGGGGGGCGCGGGGGGGGTGGGGGGGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGc < 2:7214586/150‑1 (MQ=255) ttACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGcc > 1:7634667/1‑150 (MQ=255) aCGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGt > 1:4716312/1‑150 (MQ=255) cGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGtt > 1:8034575/1‑150 (MQ=255) gggCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTAAAGGc > 2:7353280/1‑150 (MQ=255) ccGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTa > 2:4709310/1‑150 (MQ=255) ggggAACGTGGCCGCGGGCGCGGCGCACCGGGGCGCGCGGGGGGGGGGGGGGGGCCAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATtgttgt < 2:1336299/150‑1 (MQ=255) ggAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTgg > 2:6110647/1‑150 (MQ=255) gaattggTCCGCGGGCGGGGCGTCCCGGGGGGCGATGGGGGGGGGGGGGTGGCTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTggc < 1:2265796/144‑1 (MQ=255) aTTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGAGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTggcggc > 2:6271257/1‑150 (MQ=255) ccGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGctgctg > 2:8335263/1‑150 (MQ=255) cGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCGTATTGTTGTGGCGGCggctgc > 1:15192/1‑150 (MQ=255) gAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTgcg > 1:8756822/1‑150 (MQ=255) gAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTgcg > 1:2397894/1‑150 (MQ=255) gagGCTTACAGGGGCGAGATGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGt < 2:2681026/150‑1 (MQ=255) gcgtcccggggCGCGCGCGGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTAc < 2:8674623/143‑1 (MQ=255) ccgtaccggggCGCGCGCGGGGGGGGGGGGCGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTAc < 2:8674709/143‑1 (MQ=255) gtaccggggCGCGCTGGGGGGGGGGGGCTGGGAATAAAGAATGCGCAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACgg < 2:1378884/145‑1 (MQ=255) gTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCCGCTGCGCCGCGTTACgg > 1:5323659/1‑150 (MQ=255) gTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTAGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACgg > 1:1580356/1‑150 (MQ=255) cggggCGCGCTGGGGGGGGGGGGGGGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCtcc < 2:790194/149‑1 (MQ=255) cGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCtccagtcc > 1:7146677/1‑150 (MQ=255) gagaTCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCGTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGGTACGGCtccagtcca > 2:3632914/1‑150 (MQ=255) agaTCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCtccagtccag > 2:7043060/1‑150 (MQ=255) aTCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCTCCAGTCcagca > 1:6754657/1‑150 (MQ=255) | GCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGTCCGAGGGAGAGGCGTAAAGGGGCGAGATCGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCTCCAGTCCAGCA > NC_002947/4710183‑4710480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |