| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,710,332 | T→G | 11.0% | intergenic (‑75/+102) | kdpF ← / ← PP_4162 | potassium‑transporting ATPase subunit F/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,710,332 | 0 | T | G | 11.0% | 625.2 / 13.1 | 223 | intergenic (‑75/+102) | kdpF/PP_4162 | potassium‑transporting ATPase subunit F/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (121/69); new base G (2/29); total (124/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.66e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 233 total aligned reads displayed.
GCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCTCCAGTCCAGCAG > NC_002947/4710183‑4710481 | gcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGACATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGAt > 2:6974629/1‑150 (MQ=255)gcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGAt < 1:7681183/150‑1 (MQ=255)gcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGAt > 1:6093868/1‑150 (MQ=255)gcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGAt > 1:6029777/1‑150 (MQ=255)gcgcAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGAt > 1:5828417/1‑150 (MQ=255) agcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑ggg < 2:8538404/150‑1 (MQ=255) agcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑ggg < 2:3577022/150‑1 (MQ=255) agcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑ggg < 2:3656572/150‑1 (MQ=255) agcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑ggg < 2:5891082/150‑1 (MQ=255) gcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑gggg < 2:5528754/150‑1 (MQ=255) gcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑gggg < 1:1813228/150‑1 (MQ=255) gcagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑gggg < 2:8450397/150‑1 (MQ=255) cagcGCCACCCGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑ggggg < 1:3646675/150‑1 (MQ=255) cagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑ggggg < 2:3409663/150‑1 (MQ=255) cagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑ggggg < 1:6234726/150‑1 (MQ=255) cagcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑ggggg < 1:5132208/150‑1 (MQ=255) agcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑gggggg < 1:4557676/150‑1 (MQ=255) agcGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCGGTGGGGAAATTGT‑CCGAGGGAGAGGCGTGAAGGGGCGAGATC‑gggggg > 2:691632/1‑150 (MQ=255) gcgcCACCAGCAGATAAACCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggt < 1:1863407/150‑1 (MQ=255) gcgcCACCAGCAGATAAAACGCCAATACCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggt < 1:7613875/150‑1 (MQ=255) cgcCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggtg < 1:4091450/150‑1 (MQ=255) gcCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggtgg < 2:3365811/150‑1 (MQ=255) ccaccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggtggg < 2:2160074/150‑1 (MQ=255) ccaccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggtggg > 1:4194196/1‑150 (MQ=255) ccaccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggtggg > 1:8597041/1‑150 (MQ=255) caccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGATCTTGTTCCTGTTTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTTT‑CCGAGGGAGAGTCGTAAAGGGGCGAGATC‑Ggggggtgggg < 1:8455914/150‑1 (MQ=255) caccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggtgggg < 2:788145/150‑1 (MQ=255) caccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggtgggg < 2:8117048/150‑1 (MQ=255) accaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggtggggg < 1:7132320/150‑1 (MQ=255) ccaGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑Ggggggtgggggt < 1:2653707/150‑1 (MQ=255) agATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGta > 1:544270/1‑150 (MQ=255) gATAACACGCAAATGCCACTGCCAGCCGCTTTGACAGCCGGTCGCTCTTGTTCTTGTGTGGTTCTCCCGGTGTTAGGGCTGGGGCCGGTTTGGGGAATTTGT‑CGGCGGGCGCGGGGTTCAGGGGGGTGTGG‑GGGGGGTGGGGGTGGGtat < 2:2826121/150‑1 (MQ=255) gATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGtat > 2:7076276/1‑150 (MQ=255) aTAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGtata > 1:6158500/1‑150 (MQ=255) aaaaCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATATCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATaag > 2:1713355/1‑149 (MQ=255) aaaaCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCAGGTGCAGGGGGGGATCTCCCCGGGTTACGGCGGGGGCCGCTTGGGGGCACTTGT‑CCGAGGGAGAGGCGGAAAGGGGCGAGCTC‑GGGGGGTGGGGGTGGGGCTaaa > 2:4357208/1‑150 (MQ=255) aaaGGCCTATTCCTCTGCCTGCCGCTGTGTCAGCCCGTCTTGCTTGTTCTTGTGTGGATCTCGGCGTGTTTCGGCTTGGGCGGCTTTGGGGAATTTGT‑CGGTGGGAGTGGGTTAATGGGGCGTGTTC‑GGGGGGTGGGGGTGGGTATAAAg < 2:714931/150‑1 (MQ=255) aaCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGa > 1:7233460/1‑150 (MQ=255) aaCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGa > 2:1239349/1‑150 (MQ=255) aaCGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGa > 2:1120260/1‑150 (MQ=255) aCGCCAATGCCAATGCCAGCTGCTGTTTCAGCCCGTCTTGCTTGTTCTTGTGTGGTTCTCCCGTTTTTAGGGGTGGGGCCGTTTTGGTGTTTTTGT‑CGGTGGTTGAGGCTTAATGGGGCTTGTTG‑GGGGGGTGGGGGTGGGTATAAAGaa < 2:5621550/150‑1 (MQ=255) cGCCATTGCCACTGCCAGCTGCTGTGACCGCCGTTCGTGCTTTTTCTTGTGTGGATCGCCCGTTGTTCGGGGTTGGGCGGGTTTGGGTAATTTGT‑CGGTGGGTGAGGCGTAATGGGGCGTGATG‑GGGGGGTGGGGGTGGGTATAAAGAAt < 2:6282278/150‑1 (MQ=255) gCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATg > 1:1766868/1‑150 (MQ=255) gCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATg > 1:3489542/1‑150 (MQ=255) ccAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGc > 2:8415588/1‑150 (MQ=255) aaTGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGt > 1:142503/1‑150 (MQ=255) aTGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTa > 2:7379483/1‑150 (MQ=255) aTGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGGGGGGGGGGGTCTAAAGAATGCGTa > 2:8499968/1‑150 (MQ=255) aCTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGGGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAAt > 2:4546890/1‑150 (MQ=255) tGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGATTGGGCAGATTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCa > 2:875218/1‑150 (MQ=255) ccAGCAGCAGTGACAGCCCGTCGAGCATGTTCAGGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGc > 1:1292498/1‑150 (MQ=255) agcagcagTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGCGAGC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCgg > 2:3685189/1‑149 (MQ=255) gcttgagTGACTGCCGGTTGTGTTTGTTTTTGTTTGTATGTCCGGGTGTTAGGGCTTGGGCGTGTTTGGGTATTTTGT‑CGGTGGTTGTGGGGTTCTGGGGGGTGTTG‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGtt < 2:2058706/145‑1 (MQ=255) gcatTGACTGCCCGTCGTTATTTTTCTTGTGTGGATCTGCGGGTGTTTGGGCTTGGGCGGCTTTGGGTATTTTGT‑CGGTGGGTGTGGGGTATTGGGGCGCGGGG‑GGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTtgtg < 2:2458778/150‑1 (MQ=255) agTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGt > 1:5179288/1‑150 (MQ=255) gTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGAGC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTc > 2:7291189/1‑150 (MQ=255) ccGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTa > 1:7787410/1‑150 (MQ=255) tcttgtgtgGATCGCCCGTTGTTCGGGCTGGGGCCG‑GGTGGGGGAATTGTCCCGCGGGAGTGGCGCAACGGGGCGAGAGG‑GGGGGGGGGGGGGGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTcgc < 2:6727621/147‑1 (MQ=255) tCATGGGTGGACCTCCCCGTGTTACGGCGTGGGCCGCTTTGGGGAATTTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGAGC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTcgc < 1:6895587/150‑1 (MQ=255) gggggggATCACCCCTTGTTCGGGCTTGGGCCGCTTTGGGGAATTTGG‑CCGTGGGAGCGGCGTAACGAGGCGAGAGC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCggg < 2:5162876/145‑1 (MQ=255) tttgGTTCTCCCCGTGGTACGGCTTGGGCGGCGTTGGTGAACGTGG‑CCGAGGGCGCGGCGTAACGGGGCGAGCCG‑GGGGGGGGGGGGCGCGAATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCt < 2:5788227/148‑1 (MQ=255) tgGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCACTTCGCGGGCTTg > 1:5751159/1‑150 (MQ=255) gtaTCGCCCCTTTTTAGGGCTTGGGCCGCTTTGGGTAATTTGT‑CCGCGGGTGAGGCTTAATGGGGCGTTTTG‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGc < 2:3008793/148‑1 (MQ=255) gATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGcc > 1:4915005/1‑150 (MQ=255) gATCGCCCCGTGTGAGGGCTGGGGCGGCTTGGGGGAATGGGC‑CCGCGGGAGCGGCGTCACGGGGCGCGCGC‑GGGGGGTGGGGGCGCCTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGcc < 1:6290439/150‑1 (MQ=255) ttcgcccgGTGTGCCGGCTGGGGCGGGTTGGGGCAATGTGT‑CCGGGGGCGAGGCGTACGGGGGGGCGAGC‑GGGGGGGGGGGGGGGCTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGccc < 1:5969261/146‑1 (MQ=255) aTCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGccc > 2:7645695/1‑150 (MQ=255) tcCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCcgcg > 2:4383824/1‑150 (MQ=255) gccctGTGGTCCGGGTTGGGCCGCTGTGGGTAAATTGT‑CCGCGGGAGCGGGTTTATGGGGCGCGATG‑GGGGGGGGGGGGGGGCCATAAAGAATGCGTAAATATCAGCGGTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCAAGCCcgcg < 2:752186/149‑1 (MQ=255) ccccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGa > 2:5936646/1‑150 (MQ=255) cccGTGTTCCGGCTTGGGGCGCTTGGGGGAATTTGT‑CCGCGGGCGCGGGGTACCGGGGCGAGCGG‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaa < 2:6047278/150‑1 (MQ=255) cccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaa > 2:4837904/1‑150 (MQ=255) cccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaa > 2:6511455/1‑150 (MQ=255) ccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaaa > 1:5413529/1‑150 (MQ=255) ccGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGaaa > 2:1535237/1‑150 (MQ=255) cGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGGTTGCCCGCGaaga > 1:8274569/1‑148 (MQ=255) gtgtTCCGGCTTGGGCCGCTTGGGGCAAATTGT‑CCGCGGCTGTGGCGTAACGGGGCGAGAGG‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCCTTTCGCGGGCAAGCCCGCGaagag < 1:2484824/150‑4 (MQ=25) gtgtTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAgg > 1:3067308/1‑150 (MQ=255) gtTCCGGCTTGGGCCGCTTGCGGGAATTTGT‑CCGTGGGAGCGGCGTACCGGGGCGTGAGG‑GGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGc < 2:6168779/150‑1 (MQ=255) tACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCg > 1:6690296/1‑150 (MQ=255) aCGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGt > 1:4716312/1‑150 (MQ=255) gggCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAATGGCCGTTACAGGc > 2:7353792/1‑150 (MQ=255) gggCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGc > 2:1374153/1‑150 (MQ=255) ccGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTa > 2:4709310/1‑150 (MQ=255) gaattggT‑CCGCGGGCGGGGCGTCCCGGGGGGCGATG‑GGGGGGGGGGGGTGGCTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTggc < 1:2265796/144‑1 (MQ=255) gAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTGATTGTTGTggc > 2:2333612/1‑150 (MQ=255) aTTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTggcggc > 2:7339869/1‑150 (MQ=255) cGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCGTATTGTTGTGGCGGCggctgc > 1:15192/1‑150 (MQ=255) gAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTgcg > 1:8731616/1‑150 (MQ=255) gAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTgcg > 2:3957798/1‑150 (MQ=255) gAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTgcg > 1:2397894/1‑150 (MQ=255) agagGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCcgcg > 1:8229268/1‑150 (MQ=255) gagGCTTACAGGGGCGAGATG‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGt < 2:2681026/150‑1 (MQ=255) gcgtcccggggCGCGCGC‑GGGGGGGGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTAc < 2:8674623/143‑1 (MQ=255) ccgtaccggggCGCGCGC‑GGGGGGGGGGGGCGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTAc < 2:8674709/143‑1 (MQ=255) gtcccggggCGCGCTC‑GGGGGGGGGGGGGGGCCATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACgg < 1:5023303/145‑1 (MQ=255) gTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACgg > 1:8066334/1‑150 (MQ=255) gTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCCAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCCGCTGCGCCGCGTTACgg > 1:5323370/1‑150 (MQ=255) gTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTAGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACgg > 1:1580356/1‑150 (MQ=255) tAAAGGGGCGAGATCGGGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTAGGGGTCTGCCTGTAACGGCCACTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTAATAGTAGTGGCGGCTGCAGCGCCGCGTTACgg > 2:710282/1‑150 (MQ=255) | GCGCAGCAGCGCCACCAGCAGATAAAACGCCAATGCCACTGCCAGCAGCAGTGACAGCCCGTCGAGCATGTTCATGTGTGGATCTCCCCGTGTTACGGCTTGGGCCGCTTTGGGGAAATTGT‑CCGAGGGAGAGGCGTAAAGGGGCGAGATC‑GGGGGGTGGGGGTGGGTATAAAGAATGCGTAAAAATCAGCGTTGTGGTCTGCCTGTAACGGCCTCTTCGCGGGCTTGCCCGCGAAAGGGCCGTTACAGGCTTATTGTTGTGGCGGCTGCTGCGCCGCGTTACGGCTCCAGTCCAGCAG > NC_002947/4710183‑4710481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |