| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,730,036 | A→T | 6.9% | intergenic (+26/+42) | PP_5661 → / ← PP_4183 | putative lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,730,036 | 0 | A | T | 6.9% | 1048.3 / 43.7 | 336 | intergenic (+26/+42) | PP_5661/PP_4183 | putative lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (147/163); new base T (11/13); total (158/178) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 346 total aligned reads displayed.
GAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTACA > NC_002947/4729888‑4730184 | ccgccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCg > 2:4943705/1‑150 (MQ=255) cgccgAGGAAAACGTCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCgg < 2:8743331/150‑1 (MQ=255) cgccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCgg < 2:7963131/150‑1 (MQ=255) cgccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCgg < 2:5148098/150‑1 (MQ=255) gccgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCggg > 1:5973189/1‑150 (MQ=255) cgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGtt > 1:2717352/1‑150 (MQ=255) cgAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACATCGTCGGGtt < 2:2753291/150‑1 (MQ=255) gAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGttt < 1:6327606/150‑1 (MQ=255) gAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGtttttt < 1:6511311/150‑1 (MQ=255) gAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGtttttt > 2:3290641/1‑150 (MQ=255) aaaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGATGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAATAACCCGACGATGTCGGGttttttt < 2:7652075/150‑1 (MQ=255) aaaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGttttttt < 1:3977828/150‑1 (MQ=255) aaaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTtg > 1:3672284/1‑150 (MQ=255) aaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTtgt > 1:984333/1‑150 (MQ=255) aaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTtgt > 2:2923982/1‑150 (MQ=255) aaCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACATCGTCGGGTTTTTTtgt < 2:6144405/150‑1 (MQ=255) aCGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACATCGTCGGGTTTTTTtgtt < 2:5244218/150‑2 (MQ=255) tGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTCATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACt > 2:2309437/1‑150 (MQ=255) ccAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACatt > 1:714764/1‑150 (MQ=255) cAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACCCCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTc < 1:4432682/150‑1 (MQ=255) cAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTc > 2:5366284/1‑150 (MQ=255) cAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTc > 2:580494/1‑150 (MQ=255) cAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTc > 1:1451061/1‑150 (MQ=255) aaaGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCg > 1:5597071/1‑150 (MQ=255) aaGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGa < 2:8225966/150‑1 (MQ=255) gCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGt > 1:6217913/1‑150 (MQ=255) ccGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGtt > 1:2046140/1‑150 (MQ=255) aaGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCa < 2:1582192/150‑1 (MQ=255) ccGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGtt > 1:6521214/1‑150 (MQ=255) cGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTg < 1:6939391/150‑1 (MQ=255) cGAGCAGAAGGCTGCCGAAGAAGCCACTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTg < 2:3421637/150‑1 (MQ=255) gCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGttttttt < 1:2483179/113‑1 (MQ=255) gCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGaa < 1:4356223/150‑1 (MQ=255) aGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAACAAAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGaaa < 1:3769912/150‑1 (MQ=255) aaGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAaacaa < 1:1222703/150‑1 (MQ=255) aGGCTGCAGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAaacaac > 1:7484141/1‑150 (MQ=255) ggCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAAcc > 1:6608642/1‑150 (MQ=255) cgCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCGACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑ACAAACACCCGACGAGGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAAcc < 2:5858451/149‑1 (MQ=255) cTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGa < 2:2239465/150‑1 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGACCTTTCGATTAATCGTTTCAGTTGGAAACAACCGAg > 1:6789088/1‑150 (MQ=255) tGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑‑AAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGc > 1:2208804/1‑150 (MQ=255) ccGAAGAAGCCGCTCCGGCTACTCCCGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCt > 2:6510881/1‑150 (MQ=255) aagaagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTGTCGATTCATCGTGTCAGTTGGAAACAACCGCGCttgc > 2:760329/1‑148 (MQ=255) agaagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTcc < 1:7701222/150‑1 (MQ=255) gaagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCt < 1:7045887/150‑1 (MQ=255) aagCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCtt < 2:429920/150‑1 (MQ=255) agCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTg < 2:6034970/150‑1 (MQ=255) agCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTg < 1:4770228/150‑1 (MQ=255) gCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTgg > 2:3105835/1‑150 (MQ=255) ccGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGc < 2:8136943/150‑1 (MQ=255) cGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAATC‑AAAAAATCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGcc > 2:6883153/1‑150 (MQ=255) cGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGcc < 1:1631102/150‑1 (MQ=255) cGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGcc < 1:5045938/150‑1 (MQ=255) cGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGcc > 2:1433417/1‑150 (MQ=255) cGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGcc < 1:236571/150‑1 (MQ=255) cTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCgg > 2:6382447/1‑150 (MQ=255) ggCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTcc < 2:2574412/150‑1 (MQ=255) gCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCg < 2:4578671/150‑1 (MQ=255) cTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGa > 1:1161879/1‑150 (MQ=255) aCTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGCTGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACa < 1:4980013/150‑1 (MQ=255) tCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGt > 2:5650380/1‑150 (MQ=255) ggCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTGTTTGTGCCTGCGAACGTTCGATTAATCGGTTCAGTTGGAAACAACCGAGCGTGCCGGGGCCGGCGCCGCCCGTaca > 2:30124/1‑150 (MQ=255) ctactaCACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtc < 1:7360155/150‑1 (MQ=255) tactacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcg > 2:5484864/1‑150 (MQ=255) tactacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcg > 1:3501471/1‑150 (MQ=255) tactacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcg < 2:1795293/150‑1 (MQ=255) actacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCGGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcgg > 2:5045697/1‑150 (MQ=255) ctacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggt < 2:8285265/150‑1 (MQ=255) ctacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggt > 2:4168152/1‑150 (MQ=255) tacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtc > 2:194343/1‑150 (MQ=255) tacACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtc > 1:5238670/1‑150 (MQ=255) acacCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTtcggtcg > 1:8185714/1‑150 (MQ=255) acCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTcggtcggt < 1:7612558/150‑1 (MQ=255) acCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGATTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTcggtcggt < 2:6547242/150‑1 (MQ=255) cGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGgtgt > 1:4695491/1‑150 (MQ=255) cAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGaa > 2:878777/1‑150 (MQ=255) cAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGaa < 2:1228953/150‑1 (MQ=255) cTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCAt < 1:3290641/150‑1 (MQ=255) ccAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATcac > 2:7260534/1‑150 (MQ=255) cAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATcaca > 1:417099/1‑150 (MQ=255) cAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATcaca < 1:884905/150‑1 (MQ=255) aaGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATcacaa > 1:5771558/1‑149 (MQ=255) aGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTGTCGGTCGGTGTGAACACCATCACATc > 2:117962/1‑150 (MQ=255) gCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTGGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCg < 2:4706294/150‑1 (MQ=255) cAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGa < 1:8039874/150‑1 (MQ=255) cAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTATTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGa < 2:2717352/150‑1 (MQ=255) aGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAg > 1:6091518/1‑150 (MQ=255) gTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGt < 1:2883762/150‑1 (MQ=255) ttGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACAt > 1:3134020/1‑150 (MQ=255) cTAAAAC‑AAAAAAACCCGACGTTGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGa < 1:8307101/150‑1 (MQ=255) tAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGaa < 2:4364786/150‑1 (MQ=255) aaaaC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAAt < 1:3074662/150‑1 (MQ=255) aaaC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATg < 1:7855739/150‑1 (MQ=255) caC‑AAAAAAACCCGACATCGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATgg > 2:393327/2‑150 (MQ=255) aaC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGTAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATgg > 2:3629616/1‑150 (MQ=255) c‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGaa > 1:767580/1‑150 (MQ=255) c‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGaa < 1:17878/150‑1 (MQ=255) aaaaaaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAAc > 1:8519467/1‑150 (MQ=255) aaaaaaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAAc > 1:2954088/1‑150 (MQ=255) aaaaaCCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAActc > 2:1503769/1‑150 (MQ=255) | GAAGCCGCCGAGGAAAACGCCGAAGCTGCCAAAGATCAGGCCGAAGCCGAGCAGAAGGCTGCCGAAGAAGCCGCTCCGGCTACTCCGGCTCCTACTACACCGGCAGAACCTGCCAAGCAGTAATTGGCTAAAAC‑AAAAAAACCCGACGATGTCGGGTTTTTTTGTGCCTGCGAACTTTCGATTAATCGTTTCAGTTGGAAACAACCGAGCTTTCCTTGGCCGGCTCCGACAGTACACTTTCGGTCGGTGTGAACACCATCACATCGAGTACATCCGAATGGAACTCTCGACGGTACA > NC_002947/4729888‑4730184 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |