Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,855,152 | C→T | 7.8% | intergenic (+75/‑112) | hemN → / → fnrA | oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,855,152 | 0 | C | T | 7.8% | 1077.2 / 55.3 | 358 | intergenic (+75/‑112) | hemN/fnrA | oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator |
Reads supporting (aligned to +/- strand): ref base C (167/162); new base T (13/15); total (180/178) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.98e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 |
Only 100 of 364 total aligned reads displayed.
GCGCTCGGTATGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACAACCAGGC > NC_002947/4855005‑4855301 | cgcTCGGTATGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCAc < 1:7542830/150‑1 (MQ=255) ggTATGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGcc > 2:735088/1‑150 (MQ=255) gTATGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCg < 1:5041155/150‑1 (MQ=255) tATGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGTGGCCTGCCgg < 2:7569897/150‑1 (MQ=255) tATGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGTGGCCTGCCgg < 1:4789132/150‑1 (MQ=255) aTGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCggg < 1:881575/150‑1 (MQ=255) tGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGTGGCCTGCCggga < 1:3779151/150‑2 (MQ=255) tGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTc < 2:2464276/150‑1 (MQ=255) ggTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCg < 2:6758117/150‑1 (MQ=255) ggTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCg > 1:5257675/1‑150 (MQ=255) gtTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCa < 1:1885447/150‑1 (MQ=255) ttCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAg > 1:2326687/1‑150 (MQ=255) aCGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAgcgcg > 2:6659643/1‑150 (MQ=255) cgcgTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAgcgcgc < 1:4448968/150‑1 (MQ=255) gcgTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCa > 2:7425780/1‑150 (MQ=255) tGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACGAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACcatcat > 1:6327127/1‑150 (MQ=255) tGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACcatcat > 1:6643977/1‑150 (MQ=255) tGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACcatcat > 1:4195222/1‑150 (MQ=255) ggCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCatcatc > 1:6511559/1‑150 (MQ=255) ggCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCatcatc < 2:6066570/150‑1 (MQ=255) cGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATcgc < 1:1706838/150‑1 (MQ=255) cacaACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGcaca > 2:1761487/1‑150 (MQ=255) cGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGcc < 2:3734541/150‑1 (MQ=255) ccAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCTCGCACACTGGCCTa > 2:1593805/1‑150 (MQ=255) cAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTac > 1:7098347/1‑150 (MQ=255) gTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACAccc < 2:3880883/150‑1 (MQ=255) tttCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCt < 1:7696891/150‑1 (MQ=255) tctcGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCtgt < 1:1792720/150‑1 (MQ=255) tcGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTgtgt > 2:5457390/1‑150 (MQ=255) tcGCGAGTGATCTGAAAAACAAGGAGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCtgt > 2:2328698/1‑148 (MQ=255) cgcgAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTc < 2:6010990/150‑1 (MQ=255) gcgAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCg > 2:8673789/1‑150 (MQ=255) cgAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCGTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGt < 2:5593949/150‑1 (MQ=255) aGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGa < 2:1120296/150‑1 (MQ=255) aGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGa < 2:1301298/150‑1 (MQ=255) aGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGa < 1:1085142/150‑1 (MQ=255) aGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGa < 2:5128760/150‑1 (MQ=255) tGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGt < 2:3257652/150‑1 (MQ=255) aTCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTa < 1:522256/150‑1 (MQ=255) aTCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTa > 1:8207527/1‑150 (MQ=255) cTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTAcc < 1:2480070/150‑1 (MQ=255) cTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTAcc < 2:58563/150‑1 (MQ=255) cTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTAcc < 2:348411/150‑1 (MQ=255) gAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCt > 1:4544087/1‑150 (MQ=255) aaaaaCAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTGTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGGGAGTTACCCtt > 2:8075480/1‑150 (MQ=255) aaaCAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTAc < 2:4993330/150‑1 (MQ=255) aaCAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACg > 1:5455649/1‑150 (MQ=255) aCAAGGCGTTCAACCGCATGGACAAGCGTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGa < 2:3345187/150‑1 (MQ=255) gCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAt > 1:5746511/1‑150 (MQ=255) gCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAt < 2:5742188/150‑1 (MQ=255) cGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtg > 1:835852/1‑150 (MQ=255) gTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgt < 1:2657438/150‑1 (MQ=255) tCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgtgt < 1:4603939/150‑1 (MQ=255) tCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgtgt < 1:5628329/150‑1 (MQ=255) cAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAtgtgtg < 2:4745751/150‑1 (MQ=255) ccGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCtt < 2:5092231/150‑1 (MQ=255) gCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTc > 1:3159279/1‑150 (MQ=255) gACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCcaca > 1:87466/1‑150 (MQ=255) aCAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACaa < 2:8195311/150‑1 (MQ=255) gCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGAt > 2:1862375/1‑150 (MQ=255) gCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGAt > 2:7768924/1‑150 (MQ=255) tCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGa < 2:7811397/150‑1 (MQ=255) ccTTGTCATGAACACTATGAGCACACAATGACTCCCTGAATGACACCTGCCGGGGTTTCGCCAGCGCTCACCATCATCGCGCACACTGGCCTACAAACTGTGTCGTGAGTTACCCTTACGACTTATGTGTTCTTTCCCACAAGGATCTAt < 1:6073846/150‑1 (MQ=255) ccTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGAt < 1:8649805/150‑1 (MQ=255) ttGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTc > 1:2591915/1‑150 (MQ=255) ttGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTc > 1:7351868/1‑150 (MQ=255) cAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAAt < 1:1295103/150‑1 (MQ=255) aGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATg > 1:3879087/1‑150 (MQ=255) gCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTc > 1:3409162/1‑150 (MQ=255) cacaCTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTcc < 1:5381897/150‑1 (MQ=255) acacTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCg > 1:8483050/1‑150 (MQ=255) cacTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGa < 2:5813015/150‑1 (MQ=255) tATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGcc > 2:7731647/1‑150 (MQ=255) tATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGcc > 1:6747838/1‑150 (MQ=255) tATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGcc > 2:6217532/1‑150 (MQ=255) tATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGcc > 1:1205231/1‑150 (MQ=255) aTGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCa < 2:2877524/150‑1 (MQ=255) acacaAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCaaa > 1:6475877/1‑150 (MQ=255) acaAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACt > 1:1430791/1‑150 (MQ=255) acaAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACt > 2:6996436/1‑150 (MQ=255) aaGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTgc > 1:4482769/1‑150 (MQ=255) ggACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCAATTCAAATGTCCGAGCCAGTCAAACTgcgc < 1:3002714/150‑1 (MQ=255) gACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGcc < 2:4274838/150‑1 (MQ=255) gACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGcc < 1:5905613/150‑1 (MQ=255) aCTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGccc < 1:5996251/150‑1 (MQ=255) cTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCca < 1:934828/150‑1 (MQ=255) tCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcac < 2:4530404/150‑1 (MQ=255) tCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcac > 1:1007589/1‑150 (MQ=255) tCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcac > 1:624556/1‑150 (MQ=255) tCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcac > 1:5174546/1‑150 (MQ=255) tCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTAGGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcac > 2:6237073/1‑150 (MQ=255) ccccGGCAGGTGGCCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACaa < 2:6894102/109‑1 (MQ=255) ccccGGCAGGTGGCCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACaa > 1:6894102/2‑110 (MQ=255) cccGGCAGGTGGCCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcaca > 2:2738690/1‑150 (MQ=255) ccGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcacac > 1:7460771/1‑150 (MQ=255) cGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcacaca > 1:2097570/1‑150 (MQ=255) cGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcacaca > 1:777423/1‑150 (MQ=255) cGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCcacaca > 1:6139211/1‑150 (MQ=255) cAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACAAcc < 2:652780/150‑1 (MQ=255) gCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACAACCAgg < 2:2081250/150‑1 (MQ=255) | GCGCTCGGTATGCATGGTGTTCGACGCGTATCTGGCGATGCACAACCGCCAGCGTTTCTCGCGAGTGATCTGAAAAACAAGGCGTTCAACCGCATGGACAAGCTTCCTTGTCAGGCACACTATGAGCACACAAGGACTCCCGGCAGGCCACCTGCCGGGGTTTCGCCAGCGCGCACCATCATCGCGCACACTGGCCTACACCCTGTGTCGTGAGTTACCCTTACGACTTATGTGTGCTTTCCCACAAGGATCGATTCAAATGTCCGAGCCAGTCAAACTGCGCCCACACAACCAGGC > NC_002947/4855005‑4855301 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |