| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,891,160 | T→A | 5.6% | intergenic (+45/+78) | PP_4295 → / ← PP_4296 | TetR family transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,891,160 | 0 | T | A | 5.6% | 738.0 / 17.6 | 229 | intergenic (+45/+78) | PP_4295/PP_4296 | TetR family transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (88/124); new base A (2/10); total (92/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 235 total aligned reads displayed.
TCTGCGGTGACCGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGAT > NC_002947/4891011‑4891309 | tCTGCGGTGACCGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGAt < 1:4146866/150‑1 (MQ=255) gCGGTGACCGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATcac < 1:2037145/150‑1 (MQ=255) gCGGTGACCGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATcac < 2:788461/150‑1 (MQ=255) ggTGACCGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCATCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATcacca < 1:6802420/150‑1 (MQ=255) ggTGACCGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATcacca < 1:4604514/150‑1 (MQ=255) gACCGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACAt > 1:3402677/1‑150 (MQ=255) ccGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGc < 2:531198/150‑1 (MQ=255) cGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGcc > 2:7294056/1‑150 (MQ=255) ggTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATTCCt > 2:403250/1‑150 (MQ=255) gcgatacgtcggatatcgacgagcagtgtgcgatcagtgcgatcgaggaggtggggctgcgggcagatgccggggtagcggcctaaatctctattgcctgttctggcCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCt > 1:3483600‑M1/108‑150 (MQ=255) gTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCCCATGCCTg > 2:8139936/1‑150 (MQ=255) gTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTg > 2:3665308/1‑150 (MQ=255) aaGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGaa < 2:2168768/150‑1 (MQ=255) aaGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGaa < 1:6733137/150‑1 (MQ=255) aaGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGaa < 1:2457045/150‑1 (MQ=255) aaGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGaa < 2:1391916/150‑1 (MQ=255) gCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCGCCCACAGGATCACCACCGGCCGGAAggg > 1:6614126/1‑149 (MQ=255) ccAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑tt < 2:2743276/150‑1 (MQ=255) cAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑Ttg < 1:3795444/150‑1 (MQ=255) cAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑Ttg < 1:5197343/150‑1 (MQ=255) cAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑Ttg < 1:995455/150‑1 (MQ=255) aaGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑Ttgt < 2:5784340/150‑1 (MQ=255) ggatatcgacgagcagtgtgcgatcagtgcgatcgaggaggtggggctgcgggcagatgccggggtagcggcctaaatctctattgcctgttctggcCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑Ttgtg > 1:4369200‑M1/98‑150 (MQ=255) aGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑Ttgtg < 1:1419242/150‑1 (MQ=255) aGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑Ttgtg > 2:7364561/1‑150 (MQ=255) cTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGa < 1:8536151/150‑1 (MQ=255) gCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTc < 2:6596311/150‑1 (MQ=255) gACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCt < 1:7294773/150‑1 (MQ=255) cAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCtgt < 2:286183/150‑1 (MQ=255) cAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCtgt < 1:8121672/150‑1 (MQ=255) agcagtgtgcgatcagtgcgatcgaggaggtggggctgcgggcagatgccggggtagcggcctaaatctctattgcctgttctggcCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCtgtg > 1:2923538‑M1/87‑150 (MQ=255) agcagtgtgcgatcagtgcgatcgaggaggtggggctgcgggcagatgccggggtagcggcctaaatctctattgcctgttctggcCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCtgtg > 1:1887736‑M1/87‑150 (MQ=255) gTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTgg < 2:3988520/150‑1 (MQ=255) gTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTgg < 2:3177948/150‑1 (MQ=255) gTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTgg < 1:8378910/150‑1 (MQ=255) gTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTgg < 1:1135637/150‑1 (MQ=255) gATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGa < 2:7151618/150‑1 (MQ=255) agtgtgcgatcagtgcgatcgaggaggtggggctgcgggcagatgccggggtagcggcctaaatctctattgcctgttctggcCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGa > 1:6397972‑M1/84‑150 (MQ=255) agtgtgcgatcagtgcgatcgaggaggtggggctgcgggcagatgccggggtagcggcctaaatctctattgcctgttctggcCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGa > 1:511482‑M1/84‑150 (MQ=255) gtgtgcgatcagtgcgatcgaggaggtggggctgcgggcagatgccggggtagcggcctaaatctctattgcctgttctggcCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAg > 1:4452995‑M1/83‑150 (MQ=255) aTTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAg < 2:3312445/150‑1 (MQ=255) ttATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGCCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACAACCTTCAGGC‑ATGTGGTGATCCTGTGGGAGc < 2:8435781/150‑1 (MQ=18) tATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCg < 1:398221/150‑1 (MQ=255) aTGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGATAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCgg < 1:5531594/150‑1 (MQ=255) aTGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTTAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCgg < 2:8325463/150‑1 (MQ=255) aTGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACAACCTTCAGGC‑ATGTGGTGATCCTGTGGGAGCgg < 2:5636582/150‑1 (MQ=18) aTGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACAACCTTCAGGC‑ATGTGGTGATCCTGTGGGAGCgg < 2:4708940/150‑1 (MQ=18) aTGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACAACCTTCAGGC‑ATGTGGTGATCCTGTGGGAGCgg < 1:243774/150‑1 (MQ=18) aTGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCATCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCgg < 1:3090683/150‑1 (MQ=255) aTGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCgg < 1:3564794/150‑1 (MQ=255) aTGACGCGGCGGCCGAGACCATCAGTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGGACTCCACA‑ACCTACAGGCATGTGGTGATCCTGTGGGAGCgg < 2:7111641/150‑1 (MQ=18) gACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGGAAGCCCGCGCCCACAGGCTCACCACCTGCCAGAAGG‑TTGTGGGGTCCCGGTGGGAGCGGGc > 1:4630820/1‑150 (MQ=255) aCGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCt > 1:7023946/1‑150 (MQ=255) cggcggCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGc < 1:20012/150‑1 (MQ=255) cggcggCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGc < 2:2106143/150‑1 (MQ=255) ctttcGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑Ttgtg > 2:790596/5‑123 (MQ=255) gaCCATCATTGGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGGCCCTGTGGGAGCGGGCTTGCCCGCGAATgg < 2:867900/150‑1 (MQ=255) gaCCATCATTCGTATGGTCTTGAATGGTTGTGAGCGTTCGGCAGCCTGAACCATCTCGAAGGGCCTTTCGCGGGCAAGCCCGCGCCCCCAGGATCCCCACCTGCCGTAAGG‑TTGTGGTGTCCGTGGGGGAGCGGGCTTGCCCGCGAATgg < 2:3667774/150‑1 (MQ=25) ccATCATTCGTCTTGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTTAAGG‑TTGTGGAGTCCCTGTGGGTGCGGGCTTGCCCGCGAATGGGc < 2:1733153/150‑1 (MQ=255) catcatTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCAATCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCCACAGGGcc > 1:5708481/1‑150 (MQ=255) atcatTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCa > 2:5056757/1‑150 (MQ=255) atTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGaa > 2:3568958/1‑150 (MQ=255) tcgttgggTGTTGACCGGTTGTGCGCGTGCGGCCGCCTGAACCATCTCGAAGGGCCTTTCGCGGGCACGCCCGCTCCCCCAGGAGCACCACTTGCCTGAGGG‑TTGTGGAGTCCCGGTGGGCGCGGGCTGGCCCGCGAATGGGCCAGAACa < 2:1134087/144‑1 (MQ=255) cTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACCGGATCACCACAGGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATaga < 2:1495304/150‑1 (MQ=255) ttGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑tt < 2:6778169/94‑1 (MQ=255) ttGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGGGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATagag > 1:1283729/1‑150 (MQ=255) ttGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATAACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATagag > 1:7759994/1‑150 (MQ=255) aGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGACGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTa < 2:8054981/150‑1 (MQ=255) ggTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAg < 2:5384562/150‑1 (MQ=255) gTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAgg < 2:6398186/150‑1 (MQ=255) ttGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGc < 1:2152157/150‑1 (MQ=255) ccTGCGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATAACCCCATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTAcc > 1:629157/1‑150 (MQ=255) ccTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATTCCTGAAGG‑TTGTGGAGTCCCTGGGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTAcc > 1:5022809/1‑150 (MQ=255) gCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGc > 1:1034147/1‑96 (MQ=255) gCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAAAAGAGATTTAGGCCGCTACCCCGGCa > 2:8637047/1‑150 (MQ=255) ccATCTCGCCGGGCCATGCGGGGCCACGCCCCCTCCCACCGGACCCCCACATGCCTGTTGG‑TTGTGGCGCCCGTGTGGGCGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCa < 1:3142037/150‑1 (MQ=255) cATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTTGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGGCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAg > 1:641471/1‑150 (MQ=255) aTCTCGAAGGGCCATGCGCGGGCAAGCCCGCTCCCACAGGATCACCACAGGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGc < 2:6617398/150‑1 (MQ=255) gAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCAc > 2:632295/1‑150 (MQ=255) gAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCAc > 1:5840205/1‑150 (MQ=255) ggCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCAcctcc > 2:5926656/1‑150 (MQ=255) TTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGAt > 2:1381831‑M1/1‑150 (MQ=255) tgGCGGGCAAGCCCGCTCCCCCTGCATCACCACATGCCTGATGG‑TTGTGGAGTCCCTGTGGGAGCGGGGTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATc > 1:6089885‑M1/3‑150 (MQ=255) GCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTg < 1:1812207‑M1/150‑1 (MQ=255) GCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCg < 2:1898736‑M1/150‑1 (MQ=255) CCGCTCCCACCGGATCACCACTTGCCTGATGT‑TTGTGGTGTCCGTGTGGGAGGGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGca > 1:4642345‑M1/1‑150 (MQ=255) CCGCTCCCACCGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGca > 2:4139477‑M1/1‑150 (MQ=255) CCGCTCCCACCGGATCACCACAGGCCTGAAGG‑TTGTGGAGTCCCTGTGGGCGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGca > 1:571244‑M1/1‑150 (MQ=255) CGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGAGTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGcac < 2:2861549‑M1/150‑1 (MQ=255) CCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGc > 1:7267952‑M1/1‑150 (MQ=255) CACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCt < 1:7925835‑M1/150‑1 (MQ=255) CACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCt < 2:6591704‑M1/150‑1 (MQ=255) CACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCt < 1:5916394‑M1/150‑1 (MQ=255) CACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCt < 1:6349244‑M1/150‑1 (MQ=255) ACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtc < 1:8570472‑M1/150‑1 (MQ=255) ACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtc < 2:2484661‑M1/150‑1 (MQ=255) AGGATCACCACACGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtcgt < 2:4825703‑M1/150‑1 (MQ=255) aTCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGa > 2:7561985/1‑150 (MQ=255) aTCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGa > 2:5325009/1‑150 (MQ=255) tCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGat > 1:1842740/1‑150 (MQ=255) | TCTGCGGTGACCGGTAAGGCCAAGCTGGCCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGG‑TTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGAT > NC_002947/4891011‑4891309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |