| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,965,940 | T→G | 10.2% | intergenic (‑128/+136) | fliE ← / ← atoC | flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,965,940 | 0 | T | G | 10.2% | 825.0 / 6.6 | 313 | intergenic (‑128/+136) | fliE/atoC | flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC |
| Reads supporting (aligned to +/- strand): ref base T (87/172); new base G (38/2); total (139/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.11e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 320 total aligned reads displayed.
GAATTCAACACCTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGG > NC_002947/4965792‑4966088 | gAATTCAACACCTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCACCAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCtt < 1:6965709/150‑1 (MQ=255) aTTCAACACCTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCGTGc > 2:265612/1‑150 (MQ=255) aTTCAACACCTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCATGc > 2:4674346/1‑150 (MQ=255) ttCAACACCTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCg > 1:199207/1‑150 (MQ=255) ttCAACACCTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCg > 1:3437540/1‑150 (MQ=255) aaCACCTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCATCTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCGTGCGTcg > 2:5892302/1‑150 (MQ=255) aaCACCTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTcg > 2:3710381/1‑150 (MQ=255) aaCACCTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCCTGCgaag > 1:4514838/1‑147 (MQ=255) cTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTcgc > 1:7458961/1‑146 (MQ=255) ttGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGGCGTGCGGCGCGATAg > 1:953641/1‑150 (MQ=255) ttGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAg > 2:7766151/1‑150 (MQ=255) cTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGcc < 1:2095998/150‑1 (MQ=255) tCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGc < 2:8805308/135‑1 (MQ=255) aTGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCa > 2:5812068/1‑150 (MQ=255) aCCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCagag < 1:8611670/150‑1 (MQ=255) cTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCATGCGTCGCCATATGGCCGCAGAGCgg > 1:6675914/1‑150 (MQ=255) ttCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGc > 2:3148432/1‑150 (MQ=255) tctcCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCgg > 2:6888677/1‑150 (MQ=255) tctcCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCGTGCGTCGCGATAGGGGCGCCGAGCGGcccccg > 1:1884234/1‑148 (MQ=255) tctcCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCGTGCGGCGCGAGAGGGCCGCCGAGCGGCCCCgg > 1:569906/1‑150 (MQ=255) ctcCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATGGGGCCGCTCTGCGGccctatc < 2:3437540/150‑5 (MQ=255) ctcCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTCTGCGGccctatc < 1:3610643/150‑5 (MQ=255) tcCTGCGGCCGCATTTTTTTGACAGTCAGGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTCTGCGGccctatcg < 1:300269/150‑6 (MQ=255) tGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCATGCGGCGCGATAGGGCCGCACAGCGGCCCCCGCGAta > 2:4013636/1‑149 (MQ=255) gCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCt < 1:1105731/150‑1 (MQ=255) gCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGGCGTGCGGCGCGATTGGGCCCCAGAGCGGCCCCCCCGATCGTTg > 1:1072639/1‑150 (MQ=255) ccGCATTTTTTTGACCGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTgc < 2:1624000/150‑1 (MQ=255) ccGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCCGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTgc > 2:1066388/1‑150 (MQ=255) cGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGCGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGCTCTTTgcg > 2:6704566/1‑150 (MQ=255) gCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTgcgg < 1:507520/150‑1 (MQ=255) gCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTgcgg > 1:7162191/1‑150 (MQ=255) aTTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTgcggcg < 2:8696520/150‑1 (MQ=255) aTTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTgcggcg > 1:8027610/1‑150 (MQ=255) ttttttGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCGTTTCGGCGGa > 2:4559280/1‑150 (MQ=255) tttttGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTGGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTTCGGCGGAg > 2:3513168/1‑150 (MQ=255) ttGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTg < 1:911478/150‑1 (MQ=255) aCAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCGTGCGTCGCGCTAGGGCCGCCGCGCGGCCCCGGCGCGCGTTGCGGCGGCGCGGAAg > 1:4590000/1‑150 (MQ=255) aTGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTgg < 2:3601455/150‑1 (MQ=255) tGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTggg < 1:336900/150‑1 (MQ=255) cggcgAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGAt < 1:1699834/122‑1 (MQ=255) cggcgAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGc < 1:4177273/150‑1 (MQ=255) cggcgAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGc < 1:2853191/150‑1 (MQ=255) gcgAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCCTGGGGCGCCGGAGGGCCCCGAAGCGGCCCCCGCGATGGGTTGGGCGGGGGAGAAGACCTGGGGGCg > 1:266297/1‑150 (MQ=255) tacctaAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGccc < 1:4102374/150‑1 (MQ=255) acctaAAGCAACAAAGGGGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGcccc < 1:2398817/150‑1 (MQ=255) ctaAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGGCGTGGGGCGCGGTAGGGCCGCCCAGCCGCCCCCCCCCGCTTTTGGGCGGGGCGGGAGACCAGGGGGGGCGGCGCGccccca > 1:3175090/1‑148 (MQ=255) ctaAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGGCGTGCGGCGCGCTAGGGGCGCCCGGCGGCCCCCGCGGTCGTTGGGGCGGAGGTGGAGAACAGGGGGCGCCTCGCGcccccg > 1:8364538/1‑148 (MQ=255) aaaGCAACACAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTc < 1:5280230/150‑1 (MQ=255) aaaGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTc < 2:797757/150‑1 (MQ=255) aaaGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTc < 2:7868489/150‑1 (MQ=255) aaGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTcg < 2:616799/150‑1 (MQ=255) aaGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCATGCGTCGCGATAGGGGCGCAGAGCGGCCCCCGCGAACGTTGCGGCGGGGCTGAAGACCAGGGGCCGCGTCGcccccccaacg > 1:1341467/1‑145 (MQ=255) gCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCGTGCGGCGCGATAGGGGCGCAGCGCGGCCCCCGCGGGCTTTGCGGCGGGGCGGTAGACCAGGGGCCGCGTCGCGCCCCaatagcc > 2:3942423/1‑144 (MQ=255) caacaaAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGa < 1:6842016/150‑1 (MQ=255) caacaaAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGa < 2:418899/150‑1 (MQ=255) caacaaAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCCGCGATCTTTGCGGCGGGGCTGAAGAACTGGGGCCCCGGCGCGCCCCAGGcgcgc > 2:2537544/1‑149 (MQ=38) aaaGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCt > 1:4957974/1‑61 (MQ=255) aaaGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCt < 2:4957974/61‑1 (MQ=255) caGGTGCCAGCCTTCGCAACTCATGTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTGGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACaa < 2:7000261/149‑1 (MQ=255) aaGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACaa < 2:2311583/150‑1 (MQ=255) aaGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAGAGCGGCCCCCGCGATCTTTGCGGCGGGGCTGAAGACCAGGGGCCGCTTCGCGCCCCCATcgcgccccca > 2:8106427/1‑144 (MQ=38) aGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAg < 2:1224969/150‑1 (MQ=255) aGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCGTGCGGCGCGCTAGGGCCCCAGAGCGGCCCCCGCGCGCTGTGCGGCGGGGCTGGAGACCCGGGGCCGCGGCGCGCCCCCATCCCGACACAAg > 1:6029176/1‑150 (MQ=255) ggTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTCTGCGGccc > 2:2103383/1‑87 (MQ=38) tGCCAGCCTTCGCAACTCCTTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGcc < 2:1511623/150‑1 (MQ=255) cAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGtt < 2:5525484/150‑1 (MQ=255) cAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCGTGCGTCGCGATAGGGCCGCACAGCGGCCCCGGCGAACGTTGCGGCGGAGCGGGAGACCAGGGGCCGCGTCGCGCCCCAATCGCGACACAAGGCCggt > 2:6613477/1‑148 (MQ=255) aGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGCTAGGGCCGCAGAGCGGCCCCCGCGATCTTTGCGGCGGAGCGGGAGACCAGGGGCCGCGTCGCGCCCCAGTCGCGACACAAGGCCGTTc > 2:473202/1‑150 (MQ=39) aGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTc < 2:199207/150‑1 (MQ=255) gCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTcc < 2:3315857/150‑1 (MQ=255) cTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCca < 2:2268445/150‑1 (MQ=255) cTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCCGCCCCCGCGATCTTTTCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCca > 1:5862490/1‑150 (MQ=255) tCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCcaca < 1:1147640/150‑1 (MQ=255) gCAACTCATGTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACaga < 2:8339297/150‑1 (MQ=255) aaCTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCATTCGTCGCGATAGGGCCGCAGAGCGGCCCCCGCGAACTTTTCGGCGGAGCTGAAGAACAGGGGCCGCTTCGCGCCCCATTAGCGACACAAGGCCGTTACCACAGAgg > 2:3283074/1‑150 (MQ=255) cTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTc < 2:3017971/150‑1 (MQ=255) aTTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCcgc < 2:7162191/150‑1 (MQ=255) aTTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCcgc < 2:2839047/150‑1 (MQ=255) ttCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCgcgc < 1:4300984/150‑1 (MQ=255) gacAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCa < 2:7553674/148‑1 (MQ=255) cccAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCa < 2:426186/150‑1 (MQ=255) cccAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCa < 1:3710381/150‑1 (MQ=255) ccAGAGATCACACAATTCCTGCGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAGAGCCGCCCCCGCGAGCGTTGCGGCGGCGCTGGAGACCGGGGGCCGCGTCGCGCCCCCGTCGCGCCACAACGCCGGTCCCACAGAGGGCCGCGcccg > 2:1884195/1‑148 (MQ=255) agagATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGtt < 2:1171657/150‑1 (MQ=255) gaTCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCa < 1:3284930/150‑1 (MQ=255) tCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATTGGGCCGCAGTGCGGCCCCGGCGTTCTTTGCGGCGGTGCTGAAGACCTGGGGCCGCGTCGCGCCCCCGTCGCGACACAAGGCCGTTCCCACCGTGGGCCGCGCCCGTTGCAga > 2:562032/1‑150 (MQ=37) tCACACAATTCCTGCGGGAGCGGCCGTGCGGCGCGCTAGGGCCGCCGAGCGGCCCCCGCGCGCGTTGCGGCGGCGCGGAAGACCCGGGGCCGCGTCGCGCCCCCCGCGCCACCCCACGCCCGTCCCACACAGGTCCGCGCCCGGTGccgc > 2:5161297/1‑147 (MQ=255) cacacaATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAgat < 2:1738115/150‑1 (MQ=255) acaATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCGGCGCGCCCCAGTCGCCACACAAGGCCGTTCCCACACAGGTCCGCCCCAGTTTCAcatgat > 2:7086146/1‑150 (MQ=37) ccTGCGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGCGCTGAAGACCAGGGGCCGCGTCGCGCCCCAATCGCGACACCAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCa > 2:8618059/1‑150 (MQ=38) cGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCa < 1:100368/150‑1 (MQ=255) gAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGcc > 2:5408811/1‑150 (MQ=255) gAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGcc > 1:550927/1‑150 (MQ=255) gAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAACGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGcc > 1:6982434/1‑150 (MQ=255) ggCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAAc < 1:4674346/150‑1 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACa > 1:5051355/1‑150 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACa < 1:788878/150‑1 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACa < 1:6483505/150‑1 (MQ=255) ccTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCCGCCGACCAg > 1:6260266/1‑150 (MQ=255) cTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAgg > 2:4378233/1‑150 (MQ=255) | GAATTCAACACCTTGGCTCATGACCCTTCTCTCTCCTGCGGCCGCATTTTTTTGACAGTCATGCGGCGAATGACCTACCTAAAGCAACAAAGGTGCCAGCCTTCGCAACTCATTTCCCAGAGATCACACAATTCCTGCGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAGAGCGGCCCCGGCGATCTTTGCGGCGGAGCTGAAGACCTGGGGCCGCTTCGCGCCCCATTCGCGACACAAGGCCGTTCCCACAGAGGTCCGCGCCAGTTGCAGATGATTTGCCAGTCAGCCGAACAGG > NC_002947/4965792‑4966088 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |