| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,976,949 | C→G | 5.2% | intergenic (‑390/+27) | PP_4379 ← / ← flgL | 3‑oxoacyl‑ACP synthase/flagellar hook‑associated protein FlgL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,976,949 | 0 | C | G | 5.2% | 1220.6 / 38.4 | 360 | intergenic (‑390/+27) | PP_4379/flgL | 3‑oxoacyl‑ACP synthase/flagellar hook‑associated protein FlgL |
| Reads supporting (aligned to +/- strand): ref base C (161/180); new base G (15/4); total (176/184) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.55e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 373 total aligned reads displayed.
GGGCACTGGACCCCGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAGTATCGCCAATGG > NC_002947/4976801‑4977097 | gggcACTGGACCCCGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCgca > 2:5765920/1‑150 (MQ=255) cACTGGACCCCGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCgcagca > 1:4458418/1‑150 (MQ=255) aCTGGACCCCGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGcagcag < 2:3969365/150‑1 (MQ=255) cTGGACCCCGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCagcagc < 1:7395840/150‑1 (MQ=255) tGGACCCCGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGcc > 2:6015451/1‑150 (MQ=255) gACCCCGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGccct < 1:8643537/150‑2 (MQ=255) aCCCCGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATGGGGCTGCTGCGCAGcccta < 2:2943813/150‑3 (MQ=255) cccGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCCGGAGAGAGGACGACCTGTGGGGGCCTGGTGTCGCGATAGGGCTGCGCAGCAGCCCCAgg > 1:7839378/1‑150 (MQ=255) cccGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAgg > 2:8019181/1‑150 (MQ=255) ccGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGa < 2:1968742/150‑1 (MQ=255) cGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGAt > 2:3428782/1‑150 (MQ=255) aaTGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATca < 1:2284316/150‑1 (MQ=255) aaTGATCAGCGTCGCAGCAGATATCGATGGGGCCGCCTCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATca < 2:2755496/150‑1 (MQ=255) tGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGGTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATcagg < 1:3526353/150‑1 (MQ=255) aTCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATcaggca > 2:814205/1‑150 (MQ=255) tCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATcaggcag > 1:3191581/1‑150 (MQ=255) ttCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGa > 1:6072980/1‑150 (MQ=255) agcagATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGa < 2:8229467/150‑1 (MQ=255) agcagATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGa > 2:5329799/1‑150 (MQ=255) gcagATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGAt > 1:3942478/1‑150 (MQ=255) atatCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTg < 2:5600220/150‑1 (MQ=255) atCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTc < 1:3410975/150‑1 (MQ=255) atCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTc < 2:4297924/150‑1 (MQ=255) atCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTc < 2:697124/150‑1 (MQ=255) cGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGa > 2:5148172/1‑150 (MQ=255) gaaagggCCGCGATGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGaa > 2:7469931/5‑150 (MQ=255) gaaagggCCGCGATGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGaa > 1:6817769/5‑150 (MQ=255) aagggCCGCGATGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACa > 1:8024334/3‑150 (MQ=255) ggggCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAg < 1:5588703/150‑1 (MQ=255) gggCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAgg > 2:2311420/1‑150 (MQ=255) ggCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGc > 2:8528258/1‑150 (MQ=255) gCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCt > 2:3857033/1‑150 (MQ=255) cGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTa > 2:2419838/1‑150 (MQ=255) aTCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCt > 2:6730346/1‑150 (MQ=255) cgcgGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTga < 1:8355970/150‑1 (MQ=255) cccTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAAt < 2:3096062/150‑1 (MQ=255) cccTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAAt > 1:6001960/1‑150 (MQ=255) cccTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCACCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAAt < 2:2352091/150‑1 (MQ=255) cTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgc < 2:4564645/150‑1 (MQ=255) cTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgc > 2:8353216/1‑150 (MQ=255) tttCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgcg > 1:2597313/1‑150 (MQ=255) tttCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgcg > 1:6661094/1‑150 (MQ=255) tttCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgcg > 1:926577/1‑150 (MQ=255) tttCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgcg > 1:1895033/1‑150 (MQ=255) ttCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgcgc < 2:5257471/150‑1 (MQ=255) ttCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgcgc < 2:2594437/150‑1 (MQ=255) ttCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgcgc < 1:3438853/150‑1 (MQ=255) ttCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTGGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgcgc > 1:5400428/1‑150 (MQ=255) cgcgACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATgcgcgc > 2:5717654/1‑150 (MQ=255) gcgACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCa > 1:3126091/1‑150 (MQ=255) gcgACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCa > 1:621276/1‑150 (MQ=255) gACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCaaa < 1:6316559/150‑1 (MQ=255) gCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGc > 2:1444856/1‑150 (MQ=255) aaGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTa < 2:1063375/106‑1 (MQ=255) aaGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTa > 1:1063375/1‑106 (MQ=255) gCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGtt < 1:2477885/150‑1 (MQ=255) gCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGtt > 1:1417124/1‑150 (MQ=255) ccACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGc > 1:8083855/1‑150 (MQ=255) cGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCAt < 1:822480/150‑1 (MQ=255) tCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATAAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCctgc < 1:2204588/150‑1 (MQ=255) cAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCATAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCctgctg < 2:4100866/150‑1 (MQ=255) aGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCtgctgc > 1:765548/1‑150 (MQ=255) aGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCtgctgc < 1:7486767/150‑1 (MQ=255) aGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCtgctgc < 2:7130058/150‑1 (MQ=255) ggAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCa < 1:7124851/150‑1 (MQ=255) ggAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCa < 1:4537665/150‑1 (MQ=255) gagagaGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAg < 1:1230029/150‑1 (MQ=255) gagagaGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAg < 1:2874630/150‑1 (MQ=255) agagagGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAgg > 1:5912684/1‑150 (MQ=255) agagGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGt > 1:2943655/1‑150 (MQ=255) ggACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAg > 1:522236/1‑150 (MQ=255) gacgacCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGc > 2:4644789/1‑150 (MQ=255) gacgacCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGc > 2:5034451/1‑150 (MQ=255) acgacCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCt < 2:7417195/150‑1 (MQ=255) cgacCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTg < 2:6563485/150‑1 (MQ=255) gacCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGa > 2:377841/1‑150 (MQ=255) gacCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGa > 1:2778635/1‑150 (MQ=255) gacCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGa > 2:7696734/1‑150 (MQ=255) cTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAAtg > 1:4105996/1‑150 (MQ=255) cTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAAtg > 2:1609878/1‑150 (MQ=255) gtgGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAAtggt > 2:5518897/1‑150 (MQ=255) gtgGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAAtggt < 1:4329296/150‑1 (MQ=255) tggtggCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGGAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCGGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAAtggtg < 2:4415272/150‑1 (MQ=255) tgGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAAtggtg < 2:6856627/150‑1 (MQ=255) ggggCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGc < 1:5762528/150‑1 (MQ=255) gCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAACTGCGCGCAACCGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGa < 2:7839378/150‑1 (MQ=255) ttGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGc < 2:6244570/150‑1 (MQ=255) tCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGt < 2:2873026/150‑1 (MQ=255) cgcgATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTc < 1:4015269/150‑1 (MQ=255) gcgATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCa < 2:3039410/150‑1 (MQ=255) gcgATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCa > 1:3666037/1‑150 (MQ=255) cgATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAg < 1:6997770/150‑1 (MQ=255) ctggggCTGCTGCGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAGTa > 1:200984/4‑150 (MQ=255) aTAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAGTa < 1:4937091/150‑1 (MQ=255) tggggCTGCTGCGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAGTAt > 1:6397189/3‑150 (MQ=255) ggCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGTAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAGTATCGc > 2:4253029/1‑150 (MQ=255) ggCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAGTATCGc > 2:3219607/1‑150 (MQ=255) tGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAGTATCGCCaa > 2:8746593/1‑150 (MQ=255) cgcAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAGTATCGCCAATg < 1:7460236/150‑1 (MQ=255) cgcAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAGTATCGCCAATg < 2:3353339/150‑1 (MQ=255) | GGGCACTGGACCCCGAATGATCAGCTTCGCAGCAGATATCGATGGGGCCGCATCGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACGAATACGCCACCTCCAGGAGAGAGGACGACCTGTGGGGGCCTTGTGTCGCGATAGGGCTGCGCAGCAGCCCCAGGATCAGGCAGGCAGATTAGATCTTGTCGAACAGGCTTAGCTGAGAAATGCGCGCAAACGCCAGTTGCGAAGCTTCAAGCATGGCCTGCTGCAGGGTCAGCTGAATGGTGGCCGAGGCCATGTCAGTATCGCCAATGG > NC_002947/4976801‑4977097 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |