| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,154,437 | C→A | 5.4% | intergenic (‑426/+22) | PP_mr51 ← / ← PP_4535 | C4 ncRNA/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,154,437 | 0 | C | A | 5.4% | 1187.8 / 39.8 | 352 | intergenic (‑426/+22) | PP_mr51/PP_4535 | C4 ncRNA/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (196/135); new base A (16/3); total (212/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.12e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01 | |||||||||||
Only 100 of 370 total aligned reads displayed.
CTATGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCT > NC_002947/5154288‑5154586 | cTATGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATc < 2:5199719/150‑1 (MQ=255) tATGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATcc > 1:6247533/1‑150 (MQ=255) tATGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATcc > 1:2251455/1‑150 (MQ=255) tGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATcccc > 2:4328058/1‑150 (MQ=255) gcgcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATccccccc > 1:2968200/1‑150 (MQ=255) cgcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCt < 1:2725799/150‑1 (MQ=255) gcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTg > 2:8483380/1‑150 (MQ=255) gcgTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTg > 1:51013/1‑150 (MQ=255) gTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGt > 2:5714388/1‑150 (MQ=255) tCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGtt < 2:8784131/150‑1 (MQ=255) tCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGtt < 2:4513608/150‑1 (MQ=255) tCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGtt > 1:4015799/1‑150 (MQ=255) ttGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTgg < 1:7127772/150‑1 (MQ=255) gAGTCGCTGTGCATTCTGAATGACCACGAGCAATCGGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGac > 1:4406962/1‑149 (MQ=255) gAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGaa < 1:849557/150‑1 (MQ=255) gAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAAACAGGAGGCTATCCCCCCCTGGTTGGaa < 2:3985591/150‑1 (MQ=255) tCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACtt > 2:7583303/1‑150 (MQ=255) tCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACtt > 2:7802536/1‑150 (MQ=255) cGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACttg < 2:2570660/150‑2 (MQ=255) cGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTc < 1:7993087/150‑1 (MQ=255) cGCCGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTc < 1:8372181/150‑1 (MQ=255) cTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAg < 2:2029930/150‑1 (MQ=255) tgCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGGGGGGATAGCCTCCTGGTTGGAACttggatga < 2:7988788/150‑7 (MQ=38) aTTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTc > 1:7594650/1‑150 (MQ=255) ttCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCg < 1:7310018/150‑1 (MQ=255) ttCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGGCCACGCCGCCCGCCAGATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCg < 2:3194586/150‑1 (MQ=255) cTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGc < 1:1024861/150‑1 (MQ=255) gAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCaa > 2:3627549/1‑150 (MQ=255) aTGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATc < 1:7817525/150‑1 (MQ=255) aCCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGa < 1:2095359/150‑1 (MQ=255) ccACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGAc > 2:2235298/1‑150 (MQ=255) cACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGACCTTCAGTTACTCGGCAATCAGAcc > 2:7066336/1‑150 (MQ=255) cACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGAcc > 2:2729179/1‑150 (MQ=255) cACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGATGGAACTTCAGTTACTCGGCAATCAGAcc > 2:5853835/1‑150 (MQ=255) aaTCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGtt > 2:5456098/1‑150 (MQ=255) aaTCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGtt > 1:1397211/1‑150 (MQ=255) aGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTcc > 1:5789863/1‑150 (MQ=255) aGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTcc > 2:7681026/1‑150 (MQ=255) ataataCATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAg > 2:4669313/1‑150 (MQ=255) cATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGa > 1:4764613/1‑150 (MQ=255) aTGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACgca < 1:4729953/150‑3 (MQ=255) gtgtCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGt > 1:4204638/1‑150 (MQ=255) tCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTAT‑CCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTc < 1:5618477/150‑1 (MQ=255) cgccgcCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGaa < 1:739505/150‑1 (MQ=255) cgccgcCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGaa < 2:4925677/150‑1 (MQ=255) gcccgccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACa < 2:8674699/150‑1 (MQ=255) ccgccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATa < 1:3366944/150‑1 (MQ=255) ccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGtt > 1:3710001/1‑150 (MQ=255) ccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGtt > 1:5920890/1‑150 (MQ=255) ccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGtt < 2:1387830/150‑1 (MQ=255) tatCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGcc < 1:3580/150‑1 (MQ=255) tatCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGcc < 1:4328058/150‑1 (MQ=255) tCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCACGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAAATTCAGTTACTCAGCAATCAGACCTCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATTGTTGCCCt < 2:6077069/150‑1 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGc > 1:7261015/1‑150 (MQ=255) ttCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACgg > 1:4945530/1‑150 (MQ=255) cAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCa < 2:7275865/150‑1 (MQ=255) aCTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAgg < 1:8607439/150‑1 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGcc > 1:3773372/1‑150 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGcc > 2:8396607/1‑150 (MQ=255) tgtCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCcg > 1:1595664/1‑150 (MQ=255) tgtCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCcg > 1:6784493/1‑150 (MQ=255) gtCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCcgc < 2:1193033/150‑1 (MQ=255) gtCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCcgc < 1:951033/150‑1 (MQ=255) aaGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGa > 1:18079/1‑150 (MQ=255) aaGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGa > 2:5987785/1‑150 (MQ=255) ccAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCg < 1:6679771/150‑1 (MQ=255) aaTCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCa < 2:1139538/150‑1 (MQ=255) aaTCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCa > 2:3660859/1‑150 (MQ=255) tCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGa < 2:6247533/150‑1 (MQ=255) cTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCACCGGCAGGCCATCCGCGTGATCGCAGACa > 1:1918775/1‑150 (MQ=255) aTCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATg > 2:3342267/1‑150 (MQ=255) cAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAtt > 2:1689468/1‑150 (MQ=255) cAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAtt > 2:5276860/1‑150 (MQ=255) aaGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAttt > 2:6458481/1‑150 (MQ=255) aaGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGAttt < 1:2590746/150‑1 (MQ=255) ttCCAACCAGGGGGGGATAGCCTCCTGGTTGTAAATTCAGTTACTCGGCAATCAGACCGCGCGTTATCCACCGAGCGAGGACGAAGTCCTCGAAGACATAGTAGCAATGCAACGGCAGGCCAACCGCGTGATCGCAGACAATGATTTGCg > 1:2477363/1‑150 (MQ=255) ttCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCg > 1:2154697/1‑150 (MQ=255) ttCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCg > 1:5212859/1‑150 (MQ=255) tCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCgg < 1:6447134/150‑1 (MQ=255) tCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCgg > 2:6885667/1‑150 (MQ=255) ccAACCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCAc > 1:5304529/1‑69 (MQ=18) ccAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGc < 2:5067291/150‑1 (MQ=255) ccAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGc < 1:6748408/150‑1 (MQ=255) ccAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGc < 1:5455437/150‑1 (MQ=255) cAACCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCt > 2:7327865/1‑150 (MQ=255) cAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCt > 1:7007967/1‑150 (MQ=255) cAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCt > 1:8759046/1‑150 (MQ=255) aaCCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACaa < 2:5363045/137‑1 (MQ=39) aaCCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 2:1766616/1‑150 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 2:476203/1‑150 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 1:8132769/1‑150 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 2:8139852/1‑150 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt < 2:2189915/150‑1 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCtt > 1:122374/1‑150 (MQ=255) ccAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGa > 2:1594881/1‑150 (MQ=255) ggaggCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGc > 1:8299773/1‑150 (MQ=255) gaggCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGcc < 1:2843105/150‑1 (MQ=255) gaggCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGcc > 1:3228691/1‑150 (MQ=255) tATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGttt > 2:5488706/1‑150 (MQ=255) tCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTcc < 2:7465937/150‑1 (MQ=255) | CTATGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTTCTCCACCGAGCGCGGACGAAGTCCTCGAAGACATAGTTGCCCTGCAACGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTTTCCT > NC_002947/5154288‑5154586 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |