BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,201,793	T→G	5.7%	A164A (GCA→GCC) ‡	PP_4577 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,201,793	0	T	G	5.7%	1311.0 / 46.3	383	A164A (GCA→GCC) ‡	PP_4577	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (150/211); new base G (4/18); total (154/229)
Fisher's exact test for biased strand distribution p-value = 4.17e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01

Only 100 of 390 total aligned reads displayed.

CGGGCCAGACGCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTCACATAGGCCAC  >  NC_002947/5201644‑5201942

cGGGCCAGACGCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGt                                                                                                                                                       <  1:6839423/150‑1 (MQ=255)

   gCCAGACGCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGcc                                                                                                                                                    >  2:4684238/1‑150 (MQ=255)

    ccAGACGCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCt                                                                                                                                                   <  1:4901685/150‑1 (MQ=255)

     cAGACGCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTg                                                                                                                                                  <  1:5958960/150‑1 (MQ=255)

     cAGACGCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTg                                                                                                                                                  <  1:8732959/150‑1 (MQ=255)

     cAGACGCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTg                                                                                                                                                  >  1:2299883/1‑150 (MQ=255)

        aCGCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCACCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGggc                                                                                                                                               <  1:3831100/150‑1 (MQ=255)

          gCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGggcgg                                                                                                                                             <  1:4835277/150‑1 (MQ=255)

          gCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGggcgg                                                                                                                                             >  1:7711012/1‑150 (MQ=255)

          gCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGGCACTGggcga                                                                                                                                             <  2:7715109/150‑2 (MQ=255)

           cACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGggcggc                                                                                                                                            >  1:939554/1‑150 (MQ=255)

           cACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGGCACTGggcgat                                                                                                                                            <  1:4797129/150‑3 (MQ=255)

            aCCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCa                                                                                                                                           >  2:6738630/1‑150 (MQ=255)

            aCCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCACCGCCCAGGCACTGggcgatg                                                                                                                                           <  2:234712/150‑4 (MQ=255)

               gCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACgg                                                                                                                                        <  1:3343872/150‑1 (MQ=255)

                    cTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTc                                                                                                                                   <  1:3393087/150‑1 (MQ=255)

                     tCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTcg                                                                                                                                  >  1:293381/1‑150 (MQ=255)

                     atcaccacCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTcg                                                                                                                                  >  2:3428582/3‑150 (MQ=255)

                             ccGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGc                                                                                                                          >  2:6522340/1‑150 (MQ=255)

                              cgcgCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCATGGTTGTCGGCGGTGGcc                                                                                                                         <  1:7911412/150‑1 (MQ=255)

                              cgcgCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGcc                                                                                                                         <  2:1929413/150‑1 (MQ=255)

                              cgcgCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGcc                                                                                                                         >  1:827217/1‑150 (MQ=255)

                                 gcCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATc                                                                                                                      >  1:4334915/1‑150 (MQ=255)

                                 gcCGGGGCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATc                                                                                                                      <  1:7761218/150‑1 (MQ=255)

                                  ccGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCGGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCa                                                                                                                     <  2:3881520/150‑1 (MQ=255)

                                  ccGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCa                                                                                                                     <  1:6233806/150‑1 (MQ=255)

                                     ggTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCa                                                                                                                  <  1:252803/150‑1 (MQ=255)

                                      gTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCAt                                                                                                                 >  2:4124089/1‑150 (MQ=255)

                                      gTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCAt                                                                                                                 >  2:574190/1‑150 (MQ=255)

                                         gTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCaa                                                                                                              >  2:7525241/1‑150 (MQ=255)

                                             gtcgcggcgcCAGCCGGGCGCCCCCACAGCCCATGGCCGCAGGCAGTGTATGCGCGGTCTGCGAACCCCTCCAACCACAGCGGCACCCCGCATTCATCGCCCACTGCCTGGGCGGCACGGGTGTCGGCGGTGGCCATCAGCATCAACGGc                                                                                                          >  2:7754426/7‑150 (MQ=255)

                                              gCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCa                                                                                                         >  1:8638546/1‑150 (MQ=255)

                                                aCCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAgg                                                                                                       <  2:811470/150‑1 (MQ=255)

                                                aCCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAgg                                                                                                       <  1:8067462/150‑1 (MQ=255)

                                                aCCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAgg                                                                                                       <  1:3632048/150‑1 (MQ=255)

                                                  cgcgCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGtt                                                                                                     >  2:5677889/1‑150 (MQ=255)

                                                       ccGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGt                                                                                                <  2:2482332/150‑1 (MQ=255)

                                                         ggCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCa                                                                                              <  2:520414/150‑1 (MQ=255)

                                                         ggCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCa                                                                                              <  2:323386/150‑1 (MQ=255)

                                                           cAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATa                                                                                            <  1:2745222/150‑1 (MQ=255)

                                                           cAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATa                                                                                            <  1:4692424/150‑1 (MQ=255)

                                                              gcgcCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGc                                                                                         >  2:6480952/1‑150 (MQ=255)

                                                              gcgcCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGc                                                                                         >  1:2096273/1‑150 (MQ=255)

                                                                 ccgcGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCcgc                                                                                      <  1:6487260/150‑1 (MQ=255)

                                                                 ccgcGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCcgc                                                                                      >  2:5065896/1‑150 (MQ=255)

                                                                   gcgACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGa                                                                                    <  1:5747628/150‑1 (MQ=255)

                                                                     gACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACg                                                                                  >  2:3010994/1‑150 (MQ=255)

                                                                     gACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACg                                                                                  <  1:7145599/150‑1 (MQ=255)

                                                                     gACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACg                                                                                  >  2:6109035/1‑150 (MQ=255)

                                                                       cagcagATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGc                                                                                <  2:3684657/150‑1 (MQ=255)

                                                                        agcagATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGcc                                                                               >  1:2012218/1‑150 (MQ=255)

                                                                          cagATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTc                                                                             <  1:4175206/150‑1 (MQ=255)

                                                                           agATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTcc                                                                            >  2:4187915/1‑150 (MQ=255)

                                                                             aTGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAg                                                                          <  2:7427411/150‑1 (MQ=255)

                                                                             aTGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCCGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAg                                                                          <  1:7525341/150‑1 (MQ=255)

                                                                              tGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGc                                                                         >  1:1380819/1‑150 (MQ=255)

                                                                               ggCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGTCGCGGCCtatgaca                                                                        <  2:2098577/150‑7 (MQ=255)

                                                                               ggCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCa                                                                        <  2:1651278/150‑1 (MQ=255)

                                                                                gCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCAc                                                                       <  2:6137556/150‑1 (MQ=255)

                                                                                 ccGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACg                                                                      <  2:4407034/150‑1 (MQ=255)

                                                                                   gCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGt                                                                    >  1:4413171/1‑150 (MQ=255)

                                                                                   gCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGt                                                                    >  1:5114323/1‑150 (MQ=255)

                                                                                     tGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTAc                                                                  >  2:1169532/1‑150 (MQ=255)

                                                                                        cAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCa                                                               >  1:4424793/1‑150 (MQ=255)

                                                                                               tGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAg                                                        >  1:8181924/1‑150 (MQ=255)

                                                                                                  gcgGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGTGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCgg                                                     <  1:5319537/150‑1 (MQ=255)

                                                                                                     gTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTc                                                  >  1:4514375/1‑150 (MQ=255)

                                                                                                      tCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCg                                                 <  2:1283182/150‑1 (MQ=255)

                                                                                                          cGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCca                                             >  1:6666960/1‑150 (MQ=255)

                                                                                                           gAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCcat                                            >  2:4985089/1‑150 (MQ=255)

                                                                                                            aaCGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCcatc                                           <  2:736693/150‑1 (MQ=255)

                                                                                                              cGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCcatcat                                         <  2:2145598/150‑1 (MQ=255)

                                                                                                               gCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATg                                        >  1:4965925/1‑150 (MQ=255)

                                                                                                                 cTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTc                                      >  1:2180307/1‑150 (MQ=255)

                                                                                                                 cTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTc                                      >  2:5291888/1‑150 (MQ=255)

                                                                                                                   cGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGt                                    <  1:1470106/150‑1 (MQ=255)

                                                                                                                    gAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGtt                                   <  2:8443512/150‑1 (MQ=255)

                                                                                                                    gAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGtt                                   <  2:8524901/150‑1 (MQ=255)

                                                                                                                      aCCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGt                                 <  2:7167704/150‑1 (MQ=255)

                                                                                                                         acaGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACa                              >  1:3192144/1‑150 (MQ=255)

                                                                                                                         acaGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACa                              >  1:6062985/1‑150 (MQ=255)

                                                                                                                         acaGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACa                              >  1:1639453/1‑150 (MQ=255)

                                                                                                                         acaGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACa                              <  2:446976/150‑1 (MQ=255)

                                                                                                                         acaGCGGCACGCCGAGTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTCCa                              >  2:8616088/1‑150 (MQ=255)

                                                                                                                                cACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCAcc                       >  1:8476147/1‑150 (MQ=255)

                                                                                                                                   gCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATg                    >  2:8783708/1‑150 (MQ=255)

                                                                                                                                   gCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATg                    >  2:5864491/1‑150 (MQ=255)

                                                                                                                                    ccGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATgg                   >  2:286089/1‑150 (MQ=255)

                                                                                                                                     cGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATggg                  <  2:5508601/150‑1 (MQ=255)

                                                                                                                                      gATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATgggg                 <  2:6328574/150‑1 (MQ=255)

                                                                                                                                         ttCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCtt              <  1:5262668/150‑1 (MQ=255)

                                                                                                                                          tCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTc             <  1:108439/150‑1 (MQ=255)

                                                                                                                                           cATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTca            >  1:838094/1‑150 (MQ=255)

                                                                                                                                            aTCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTcac           <  2:124228/150‑1 (MQ=255)

                                                                                                                                              cGCCCAGGCACTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTCACAt         >  1:1029364/1‑150 (MQ=255)

                                                                                                                                               gCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTCACATa        <  2:6804311/150‑1 (MQ=255)

                                                                                                                                               gCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTCACATa        <  1:2632178/150‑1 (MQ=255)

                                                                                                                                                aaccgTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCAGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTCACATAg       >  2:2699879/5‑150 (MQ=255)

                                                                                                                                                 ccAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTCACATAgg      <  2:6982355/150‑1 (MQ=255)

                                                                                                                                                     tGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTCACATAGGCCAc  <  2:3993222/150‑1 (MQ=255)

CGGGCCAGACGCACCGCCTGCTCCACCACCCGCGCCGGGTCGTGATGCACCGCGCCCGGCAGGCGCCGCGACAGCAGATGGCCGCTGGCAGTGTATGCGCGGTCTGCGAACGCCTCGAACCACAGCGGCACGCCGATTTCATCGCCCAGTGCCTGGGCGGCACGGTTGTCGGCGGTGGCCATCAGCATCAACGGCAGGTTGCTGTCATAGGCCGCGACGGCCTCCAGCACGGTACGCAGCTTGAGCGGGTCGGCCATCATGTCGTTGTACAGCGCACCATGGGGCTTCACATAGGCCAC  >  NC_002947/5201644‑5201942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`