| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,321,049 | C→T | 5.8% | intergenic (‑120/+31) | PP_4677 ← / ← ilvC | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,321,049 | 0 | C | T | 5.8% | 1148.3 / 36.3 | 362 | intergenic (‑120/+31) | PP_4677/ilvC | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase |
| Reads supporting (aligned to +/- strand): ref base C (192/149); new base T (9/12); total (201/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 377 total aligned reads displayed.
CTTGTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCG > NC_002947/5320900‑5321198 | cTTGTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGcc > 1:912793/1‑150 (MQ=255)cTTGTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGcc < 1:7661074/150‑1 (MQ=255)cTTGTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGATCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGcc > 2:5722892/1‑150 (MQ=255) ttGTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCg > 2:8731160/1‑150 (MQ=255) ttGTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCCGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCg > 1:7060395/1‑150 (MQ=255) gTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGaa > 2:5658422/1‑150 (MQ=255) gTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGaa > 1:6575453/1‑150 (MQ=255) ttCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAg > 1:5935995/1‑150 (MQ=255) ggCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCcg > 2:793119/1‑150 (MQ=255) gCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCcgc > 1:1007982/1‑150 (MQ=255) tctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGt > 1:6144426/1‑150 (MQ=255) tctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGt < 1:5851719/150‑1 (MQ=255) ttCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCAAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGttt < 2:3455355/150‑1 (MQ=255) cGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCTTCGGCCGCGttttt < 1:4831513/150‑1 (MQ=255) cGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCTTCGGCCGCGttttt < 2:28562/150‑1 (MQ=255) cGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCTTCGGCCGCGttttt < 2:6852412/150‑1 (MQ=255) cGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGttttt < 1:7280036/150‑1 (MQ=255) cGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGttttt < 1:6738264/150‑1 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACG‑AAAAACGCGGCTTCGGCCGCGttttttc < 2:309972/150‑3 (MQ=255) ttCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCttt < 1:6809009/150‑1 (MQ=255) ttCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCttt < 2:2151232/150‑1 (MQ=255) ttCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCttt < 1:285365/150‑1 (MQ=255) tCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGGTGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATa > 1:2947570/1‑150 (MQ=255) tCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATa < 1:3291279/150‑1 (MQ=255) cATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAACCAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATaa < 2:8531717/150‑1 (MQ=255) cATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATaa < 2:7427488/150‑1 (MQ=255) cATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATaa < 2:7219921/150‑1 (MQ=255) tGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGa < 1:5658422/150‑1 (MQ=255) tGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTATATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGa < 1:1923102/150‑1 (MQ=255) aGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGAcgt > 2:7534963/1‑148 (MQ=255) aGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACtt < 2:1706150/150‑1 (MQ=255) gggTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTa < 2:8467568/150‑1 (MQ=255) gggTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTa > 2:7654566/1‑150 (MQ=255) ggTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAg < 2:5531796/150‑1 (MQ=255) ggTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAg < 1:3096718/150‑1 (MQ=255) ggTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAg < 1:1534085/150‑1 (MQ=255) cTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCtt > 1:7489532/1‑150 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGTCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 2:1835247/150‑1 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 2:6586919/150‑1 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg > 1:8581899/1‑150 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 1:4238550/150‑1 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 2:8057108/150‑1 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 1:8770364/150‑1 (MQ=255) aaCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCt > 2:4104641/1‑150 (MQ=255) cAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTg > 2:3158478/1‑150 (MQ=255) ggATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTc > 1:4397580/1‑150 (MQ=255) tGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACGTAGTTCGTGGTGTTGTcgag > 1:5356555/1‑149 (MQ=255) ggAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTcgacg > 1:2588096/1‑150 (MQ=255) gAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTcgacga > 2:4980492/1‑150 (MQ=255) aaaaTGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGAt > 1:3722446/1‑150 (MQ=255) aaaaTGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGAt > 1:7955165/1‑150 (MQ=255) aaaaTGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGAt > 1:3963974/1‑150 (MQ=255) tGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTg < 1:8332040/150‑1 (MQ=255) tCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTa < 1:7791295/150‑1 (MQ=255) cacGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCg < 2:2513982/150‑1 (MQ=255) cGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTACACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgag < 1:3507443/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 2:4446210/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 2:438405/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga > 1:5311513/1‑150 (MQ=255) ccccGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATc > 1:1140597/2‑150 (MQ=255) ccGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCa > 2:1603806/1‑150 (MQ=255) ccGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCa < 2:6457076/150‑1 (MQ=255) cgcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCAc < 2:669603/150‑1 (MQ=255) cgcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCAc > 1:2316882/1‑150 (MQ=255) cgcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCAc < 1:381174/150‑1 (MQ=255) cgcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCAc > 1:4862543/1‑150 (MQ=255) gcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACg > 1:2085655/1‑150 (MQ=255) gTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCg > 1:6525892/1‑150 (MQ=255) gTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGGTCGTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCg > 2:464459/1‑150 (MQ=255) tGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCagcgagcg > 2:423819/1‑150 (MQ=255) cGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgctg < 2:6257318/150‑1 (MQ=255) gTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatg > 2:4513977/1‑150 (MQ=255) cTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatgat < 1:6005492/150‑1 (MQ=255) cTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtctc > 2:5941477/1‑150 (MQ=255) ccAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCg > 2:5020484/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt > 2:7775113/1‑150 (MQ=255) aaGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAg < 1:453659/150‑1 (MQ=255) aaGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAg < 1:5407202/150‑1 (MQ=255) tGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAgcggc > 1:5231746/1‑150 (MQ=255) tGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAgcggc < 2:7060395/150‑1 (MQ=255) aTGCCATAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCgtt < 1:4655453/150‑1 (MQ=255) aTGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCgtt < 2:4862591/150‑1 (MQ=255) aTGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCgtt < 2:2286546/150‑1 (MQ=255) gCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCgttgt < 2:5899458/150‑1 (MQ=255) ccAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCgttgtt > 2:1428372/1‑150 (MQ=255) ccAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCgttgtt > 1:810745/1‑150 (MQ=255) aGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgc > 1:2742387/1‑150 (MQ=255) aGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgc > 2:4309869/1‑150 (MQ=255) aaCGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgcgg > 1:4993574/1‑150 (MQ=255) tgaaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 2:6223255/3‑150 (MQ=255) gAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGGTAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 1:6265653/1‑150 (MQ=255) gAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 2:1984593/1‑150 (MQ=255) gaaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCt > 2:1157901/2‑150 (MQ=255) gaaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGGTCTTGGTCTTGTCGACGATTTTGGTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTGGTTGCGGCGCt > 2:6572467/2‑150 (MQ=255) aaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg > 2:3845886/1‑150 (MQ=255) aaaCGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg < 2:823506/150‑1 (MQ=255) cgGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTc < 1:3158478/150‑1 (MQ=255) ggCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTAGCGGCGCTTGGCGGTCa > 2:5147526/1‑150 (MQ=255) gCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCAt > 1:739678/1‑150 (MQ=255) cGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCg > 1:8177918/1‑150 (MQ=255) | CTTGTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCG > NC_002947/5320900‑5321198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |