| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,321,051 | A→C | 5.7% | intergenic (‑122/+29) | PP_4677 ← / ← ilvC | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,321,051 | 0 | A | C | 5.7% | 1261.3 / 44.7 | 369 | intergenic (‑122/+29) | PP_4677/ilvC | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/ketol‑acid reductoisomerase |
| Reads supporting (aligned to +/- strand): ref base A (195/152); new base C (9/12); total (204/165) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01 | |||||||||||
Only 100 of 376 total aligned reads displayed.
GTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAT > NC_002947/5320903‑5321200 | gTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGaa > 1:6575412/1‑150 (MQ=255) ggCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCcg > 1:2744201/1‑150 (MQ=255) gCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCcgc > 1:1007982/1‑150 (MQ=255) tctTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGt > 1:6144385/1‑150 (MQ=255) cGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCTTCGGCCGCGttttt < 2:6852412/150‑1 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTc < 2:5614505/150‑1 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTc < 2:3587011/150‑1 (MQ=255) gggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACG‑AAAAACGCGGCTTCGGCCGCGttttttc < 2:309972/150‑3 (MQ=255) ggACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCa > 2:5706295/1‑150 (MQ=255) ggACGTTCGCTCATGGAGGGTACCGTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCTTCGGCCGCGttttttc < 2:7217053/150‑3 (MQ=255) ggACGTACGCTCACCGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCTTCGGCCGCGttttttc < 2:7711262/150‑3 (MQ=255) gACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCAt > 2:1827518/1‑150 (MQ=255) ttCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCttt < 2:2151232/150‑1 (MQ=255) tCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTc < 2:3311164/150‑1 (MQ=255) gCTCATTGAGGGTACCTATCAACAGGAATGAAAATGTTAGAAACGGTCACGATAAACAGGTTCTGAAATCGAGAAACTGCTCTTCTTTATACCAGAAGCTGGAAGCCAGAACTAAAAAACCCTGACGAAGCCGCGATTTTCATCATTAGa > 2:803892/1‑150 (MQ=255) tCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATa > 1:2947795/1‑150 (MQ=255) tCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATa > 1:3176940/1‑150 (MQ=255) tCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATa > 1:7523509/1‑150 (MQ=255) tGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTATATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGa < 1:1923102/150‑1 (MQ=255) gAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACt > 2:4931167/1‑150 (MQ=255) aGGGTTCCTTGGAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACTGCGAGCCACTGGTCTGCTTTATACCTGAAGCTGGATGCGAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACtt < 2:8694207/150‑1 (MQ=255) aGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACtt < 2:1706150/150‑1 (MQ=255) ggTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAg < 1:1534085/150‑1 (MQ=255) ccTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCt < 1:6811387/150‑1 (MQ=255) cTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCtt > 2:705638/1‑150 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 1:7070405/150‑1 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 1:4238550/150‑1 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 2:592182/150‑1 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 2:4623071/150‑1 (MQ=255) ttGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTg < 2:4074653/150‑1 (MQ=255) gCAACAGGTTGGAAAATTTTCGACTCGGGCCCGCGAAACAGGTTCTGACTGCGAGCCACTGGTCTTCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGt < 1:5310107/150‑1 (MQ=255) gCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGt < 1:3727571/150‑1 (MQ=255) aCAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCtt < 1:4852816/150‑1 (MQ=255) cAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTg > 2:3158478/1‑150 (MQ=255) gATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTcg > 2:761244/1‑150 (MQ=255) aTGGAAAATTTTCGACCCGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTcga < 1:7486004/150‑1 (MQ=255) aTGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCATAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTcga < 1:6233870/150‑1 (MQ=255) aaaaTGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGAt > 2:84620/1‑150 (MQ=255) aaaaTGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGAt > 1:7955165/1‑150 (MQ=255) tGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTg < 1:467157/150‑1 (MQ=255) ttCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGtt > 2:1386718/1‑150 (MQ=255) tCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTa < 2:7896668/150‑1 (MQ=255) tCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTa < 1:7791141/150‑1 (MQ=255) acacGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGcc < 1:664737/150‑1 (MQ=255) cGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTACACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgag < 1:3507443/150‑1 (MQ=255) gggCCCGCTAAACATTTTCTGACAGCTAGACACTTTTGTGATTTATACCAGAAGCTGGATGCAATAACGAAAAAACGCGGCCGAAGCCGAGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 1:5381190/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 1:5718042/150‑1 (MQ=255) gggCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCgaga < 2:4446057/150‑1 (MQ=255) ccccGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATc > 1:1140597/2‑150 (MQ=255) ccGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCa > 2:1603806/1‑150 (MQ=255) ccGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCa > 1:5340847/1‑150 (MQ=255) ccGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCa < 2:6457076/150‑1 (MQ=255) cgcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCAc > 1:2316882/1‑150 (MQ=255) gcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACg > 1:2085655/1‑150 (MQ=255) gcgAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACg < 1:2588461/150‑1 (MQ=255) cAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTGGTCGACGATTTTGTTAGCCGAGATCCACGGcatca > 1:4610805/1‑150 (MQ=255) gTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCg > 1:6484927/1‑150 (MQ=255) ttCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGa < 1:3121465/150‑1 (MQ=255) gacTGCCAGCGAGCCACGGGTCTGCTTTATACCAGAAGCTGGAGGCCAGAACGAAAAACCGCGGCCGATGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGa < 1:5505584/148‑1 (MQ=255) tGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCagcgagcg > 2:423819/1‑150 (MQ=255) tGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAgcg > 2:6487959/1‑150 (MQ=255) aGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgc > 1:5862435/1‑150 (MQ=255) cGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAgctg < 2:6257318/150‑1 (MQ=255) cACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGc > 2:8206821/1‑150 (MQ=255) ggTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgat < 1:8537293/150‑1 (MQ=255) gTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatg > 2:4513977/1‑150 (MQ=255) tCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGA‑TTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatgat > 2:6576043/1‑150 (MQ=255) cggCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCgatgat < 1:3881755/148‑1 (MQ=255) tGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtc > 1:6801752/1‑150 (MQ=255) tGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtc < 1:8161896/150‑1 (MQ=255) gCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtct > 1:900216/1‑150 (MQ=255) cTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtctc > 2:4374785/1‑150 (MQ=255) cTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtctc > 2:849711/1‑150 (MQ=255) cTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGAtctc > 2:5941477/1‑150 (MQ=255) tttATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACGTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCg > 2:7505402/1‑150 (MQ=255) ccAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCg > 2:5020484/1‑150 (MQ=255) cAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGt > 1:5226021/1‑150 (MQ=255) gAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGa < 1:4462142/150‑1 (MQ=255) cTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAgcgg < 1:3380222/150‑1 (MQ=255) tGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAgcggc > 2:486033/1‑150 (MQ=255) tGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAgcggc < 1:4104641/150‑1 (MQ=255) tGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAgcggc > 1:2907581/1‑150 (MQ=255) aTGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCgtt < 2:2286546/150‑1 (MQ=255) ccAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCgttgtt > 1:810745/1‑150 (MQ=255) aGAACGACCAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTGAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTgc < 2:7320470/150‑1 (MQ=255) tgaaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 2:6223255/3‑150 (MQ=255) gAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 2:4295228/1‑150 (MQ=255) gAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTGAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGgcgc > 1:8697641/1‑150 (MQ=255) gaaaaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCt > 2:1157808/2‑150 (MQ=255) aaaaaCGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCGTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCtt > 1:7387281/1‑150 (MQ=255) aaaCGCGGCTTCGGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg > 1:5943980/1‑150 (MQ=255) aaaCGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg < 1:4980492/150‑1 (MQ=255) aaaCGCGGCCGAAGCCGCGATTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTgg < 2:1967504/150‑1 (MQ=255) aaCGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGc > 2:2508020/1‑150 (MQ=255) cgGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTc < 1:4658628/150‑1 (MQ=255) ggCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTAGCGGCGCTTGGCGGTCa > 2:5147526/1‑150 (MQ=255) gCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCAt > 2:5486644/1‑150 (MQ=255) ccGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATc < 1:8318655/150‑1 (MQ=255) cGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGGTGTTGCGGCGCTTGGCGGTCATCg > 2:6658496/1‑150 (MQ=255) aaGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGTGGTCATCGAt < 2:2744201/150‑1 (MQ=255) | GTTCGGCTCTTCGGGACGTTCGCTCATGGAGGGTACCTTGCAACAGGATGGAAAATGTTCGACACGGGCCCGCGAAACAGGTTCTGACAGCGAGCCACTGGTCTGCTTTATACCAGAAGCTGGATGCCAGAACGAAAAAACGCGGCCGAAGCCGCGTTTTTCATCTTTCGATAAGACTTAGTTCTTGGTCTTGTCGACGATTTTGTTAGCCGAGATCCACGGCATCATCGAGCGCAGCTGCTCGCCGATGATCTCGATGCCGTGAGCGGCGTTGTTGCGGCGCTTGGCGGTCATCGAT > NC_002947/5320903‑5321200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |