| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,467,259 | A→T | 6.3% | D401V (GAT→GTT) ‡ | PP_4798 → | membrane‑bound lytic murein transglycosylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,467,259 | 0 | A | T | 6.3% | 1119.2 / 42.7 | 335 | D401V (GAT→GTT) ‡ | PP_4798 | membrane‑bound lytic murein transglycosylase |
| Reads supporting (aligned to +/- strand): ref base A (123/191); new base T (14/7); total (137/198) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.00e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
Only 100 of 342 total aligned reads displayed.
CCTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCT > NC_002947/5467110‑5467408 | ccTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGa < 2:8754788/150‑1 (MQ=255)ccTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGa < 2:3617709/150‑1 (MQ=255) cTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCGGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGAt < 2:8199131/150‑1 (MQ=255) gCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGc < 2:6951041/150‑1 (MQ=255) gAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCATCGGCATTac < 1:3806358/150‑2 (MQ=255) aGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTacc < 2:4840008/150‑3 (MQ=255) aGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATc > 2:2986536/1‑150 (MQ=255) aGCCTGCTCGGGGATCGCTTCAGCGGCAGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCATCGGCATTacc < 2:141087/150‑3 (MQ=255) ccTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCgg < 1:3736389/150‑1 (MQ=255) ccTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCgg > 2:60078/1‑150 (MQ=255) ccTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCgg > 2:2722131/1‑150 (MQ=255) ccTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCgg > 2:4494262/1‑150 (MQ=255) gCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGc < 2:5269075/150‑1 (MQ=255) gCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGc < 2:565319/150‑1 (MQ=255) tCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATAGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCa < 1:989602/150‑1 (MQ=255) ggATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGACCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATAc < 1:7380823/150‑1 (MQ=255) gATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATAcc > 1:6536966/1‑150 (MQ=255) aTCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATAccc > 1:396346/1‑150 (MQ=255) aTCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATAccc > 1:1150460/1‑150 (MQ=255) aTCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATAccc < 2:2230265/150‑1 (MQ=255) tCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCg > 2:3498631/1‑150 (MQ=255) cTTCAGCGGCTGGGGCTTCAGTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCaa < 2:6667243/150‑1 (MQ=255) ttCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAg < 1:1443614/150‑1 (MQ=255) ttCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAg < 1:5432116/150‑1 (MQ=255) ggCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATc < 1:1276550/150‑1 (MQ=255) gCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATcc < 2:4396676/150‑1 (MQ=255) cTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCg < 2:772963/150‑1 (MQ=255) gggCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCaa > 1:7793060/1‑150 (MQ=255) ggCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAAt > 1:2545719/1‑150 (MQ=255) ggCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAAt < 1:2888925/150‑1 (MQ=255) ttCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGcc > 2:367662/1‑150 (MQ=255) cATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCTTTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCa < 2:640090/150‑1 (MQ=255) cATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCa < 2:114403/150‑1 (MQ=255) aTTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAg > 1:4883513/1‑150 (MQ=255) aTTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAg > 1:4150089/1‑150 (MQ=255) ttGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGc < 1:1597715/150‑1 (MQ=255) cGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGAGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAgg > 1:5121128/1‑150 (MQ=255) cGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACCTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAgg > 1:4802219/1‑150 (MQ=255) ggCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCCGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAggg > 2:2499123/1‑150 (MQ=255) aGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTg < 2:3890305/150‑1 (MQ=255) gCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTgg > 1:5302337/1‑150 (MQ=255) gCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTgg < 2:7349967/150‑1 (MQ=255) cTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTggg < 1:8603976/150‑1 (MQ=255) ggACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGa < 1:4434298/150‑1 (MQ=255) gACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGAt < 1:802540/150‑1 (MQ=255) cTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGc > 2:6566752/1‑150 (MQ=255) gCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTa > 1:6912171/1‑150 (MQ=255) ccGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTAc > 1:8041289/1‑150 (MQ=255) ccGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTAc < 1:2241039/150‑1 (MQ=255) gCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTAccc < 1:2056647/150‑1 (MQ=255) gCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTAccc > 1:6885702/1‑150 (MQ=255) cAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGAc < 1:3545874/150‑1 (MQ=255) ccGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTgg > 1:7934202/1‑122 (MQ=255) ccGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCca > 1:7198254/1‑150 (MQ=255) cGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCcac > 2:8297998/1‑150 (MQ=255) gCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAACACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCcaca > 2:1486545/1‑150 (MQ=255) cACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACaa < 2:5037198/150‑1 (MQ=255) cACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACaa < 1:5839771/150‑1 (MQ=255) aGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAgctgc < 1:8494248/150‑1 (MQ=255) aGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAgctgc < 2:4567796/150‑1 (MQ=255) aGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAgctgc < 1:2750823/150‑1 (MQ=255) cgcATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCtt < 1:4481369/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 2:6852364/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 2:1098690/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 1:4935172/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 2:5769335/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 1:8299775/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 2:1247277/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 2:7963815/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 2:556040/150‑1 (MQ=255) aGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGcc < 1:1382533/150‑1 (MQ=255) gTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCt < 2:2730582/150‑1 (MQ=255) cAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTgcgc < 1:6644011/150‑1 (MQ=255) aGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGcc > 2:8026574/1‑150 (MQ=255) aGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGcc > 2:1736911/1‑150 (MQ=255) aaCTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCcag > 2:6298985/1‑150 (MQ=255) aaCTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCcag < 1:4709183/150‑1 (MQ=255) cTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTaa < 2:5361910/150‑1 (MQ=255) cTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTaa < 1:1299062/150‑1 (MQ=255) tGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAg < 1:3373329/150‑1 (MQ=255) aCAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCAt > 1:7597781/1‑150 (MQ=255) cAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCAtt < 2:8098717/150‑1 (MQ=255) tgCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTgcgc < 2:3271637/150‑1 (MQ=255) tgCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTgcgc < 2:2647357/150‑1 (MQ=255) cccgatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGcgcg > 2:1923315/6‑150 (MQ=255) cccgatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGcgcg > 1:595869/6‑150 (MQ=255) cccgatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGcgcg > 1:7048371/6‑150 (MQ=255) cccgatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGcgcg > 2:4152495/6‑150 (MQ=255) ccgatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCgg > 1:7409046/5‑150 (MQ=255) ccgatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCgg > 2:3995297/5‑150 (MQ=255) gggTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGc > 1:1844347/1‑150 (MQ=255) gTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGccc < 1:623635/150‑1 (MQ=255) tAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCGCAGCGGcccc < 1:3590598/150‑1 (MQ=255) tGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGt < 1:3218350/150‑1 (MQ=255) tGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGt > 2:4449666/1‑150 (MQ=255) gCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTa > 1:1866932/1‑150 (MQ=255) ccGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTaa < 1:8340267/150‑1 (MQ=255) ccGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTaa < 1:6506616/150‑1 (MQ=255) ccGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTaa < 2:8527131/150‑1 (MQ=255) aTGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAAtct < 1:2986536/150‑1 (MQ=255) | CCTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCT > NC_002947/5467110‑5467408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |