| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,467,260 | T→C | 6.3% | D401D (GAT→GAC) ‡ | PP_4798 → | membrane‑bound lytic murein transglycosylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,467,260 | 0 | T | C | 6.3% | 1051.6 / 37.2 | 331 | D401D (GAT→GAC) ‡ | PP_4798 | membrane‑bound lytic murein transglycosylase |
| Reads supporting (aligned to +/- strand): ref base T (122/188); new base C (14/7); total (136/195) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.03e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 338 total aligned reads displayed.
CTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTC > NC_002947/5467111‑5467409 | cTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGACAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGAt < 2:8199191/150‑1 (MQ=255) tGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATg < 2:3352787/150‑1 (MQ=255) tGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATg < 2:2708566/150‑1 (MQ=255) tGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATg > 1:6072958/1‑150 (MQ=255) tGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATg > 1:565319/1‑150 (MQ=255) gAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCATCGGCATTac < 2:6473489/150‑2 (MQ=255) gCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGATAATGCCATCGGCATTaccc < 2:5819786/150‑4 (MQ=255) ccTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCgg > 2:867938/1‑150 (MQ=255) ccTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCgg < 1:3736462/150‑1 (MQ=255) tGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCgggg < 2:5601704/150‑1 (MQ=255) tGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCgggg > 2:4466210/1‑150 (MQ=255) gCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGATAATGCCATCGGCATTacccg < 2:8107358/147‑5 (MQ=255) gCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGATAATGCCATCGGCATTacccg > 1:8107358/1‑143 (MQ=255) cTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGcc < 2:2282535/150‑1 (MQ=255) tCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCa > 2:575347/1‑150 (MQ=255) ggggATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAAt > 1:8511107/1‑150 (MQ=255) gggATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATa < 2:515887/150‑1 (MQ=255) gggATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATa < 2:4099926/150‑1 (MQ=255) aTCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATAccc > 1:1150460/1‑150 (MQ=255) cGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGc > 2:8312506/1‑150 (MQ=255) gCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCa < 1:4592329/150‑1 (MQ=255) cTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCaa < 1:4083698/150‑1 (MQ=255) ttCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAg < 1:3602091/150‑1 (MQ=255) ttCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAg < 1:1443614/150‑1 (MQ=255) ttCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAg < 1:8038730/150‑1 (MQ=255) ggCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATc < 1:1276550/150‑1 (MQ=255) ggCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATc < 2:1150460/150‑1 (MQ=255) ggCTGGGGCTTCAGTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATc < 1:3830998/150‑1 (MQ=255) gCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATcc > 2:1645621/1‑150 (MQ=255) gCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATcc > 1:4748663/1‑150 (MQ=255) gCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATcc > 2:7998045/1‑150 (MQ=255) ggCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAAt > 1:2545719/1‑150 (MQ=255) ggCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAAt < 1:2888925/150‑1 (MQ=255) ttCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGcc > 2:7734755/1‑150 (MQ=255) tCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGccc < 1:4901115/150‑1 (MQ=255) tCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGccc > 2:3590358/1‑150 (MQ=255) cagtGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCa < 1:6452545/147‑1 (MQ=255) cATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCa < 1:7952099/150‑1 (MQ=255) aTTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAg > 1:1589176/1‑150 (MQ=255) ttGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGc > 2:4355088/1‑150 (MQ=255) tGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCa < 1:6944167/150‑1 (MQ=255) gCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCaa > 1:7426171/1‑150 (MQ=255) gCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTgg < 2:7351598/150‑1 (MQ=255) tGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGa > 2:5472132/1‑150 (MQ=255) gCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATg < 2:6865420/150‑1 (MQ=255) gCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATg < 2:1111236/150‑1 (MQ=255) cGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGc > 2:6337044/1‑150 (MQ=255) aaaGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCcg > 2:1001414/1‑150 (MQ=255) agGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCcggcgg > 1:8302377/1‑150 (MQ=255) ggACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGa < 2:211635/150‑1 (MQ=255) gACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGAt < 2:1881718/150‑1 (MQ=255) gCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTa > 1:4849446/1‑150 (MQ=255) ccGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTAc < 1:2241039/150‑1 (MQ=255) ccGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTAc < 1:433343/150‑1 (MQ=255) gCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTAccc < 1:2056647/150‑1 (MQ=255) gCTCAGCCGCACCGAGCGCATGGAGTAGCAGACCTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAACACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCCAccc < 1:3296219/150‑1 (MQ=255) tCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGa > 2:8600471/1‑150 (MQ=255) tCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGa > 1:6656239/1‑150 (MQ=255) tCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGa > 1:5064373/1‑150 (MQ=255) cAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGAc < 2:3218004/150‑1 (MQ=255) cAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGAc < 1:5415001/150‑1 (MQ=255) gCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGAccc < 2:6632685/150‑1 (MQ=255) cGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCcac > 2:8056629/1‑150 (MQ=255) cACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACaa < 2:4565417/150‑1 (MQ=255) cACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACaa < 1:5142821/150‑1 (MQ=255) aCCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAg > 2:6017738/1‑150 (MQ=255) aGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAgctgc < 1:2750967/150‑1 (MQ=255) aGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAgctgc < 1:5879302/150‑1 (MQ=255) cgcATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCtt < 1:7654351/150‑1 (MQ=255) cgcATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCtt < 1:7398373/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 2:1247277/150‑1 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga > 1:8617/1‑150 (MQ=255) tGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTgaga < 1:4466210/150‑1 (MQ=255) gAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGc > 1:650755/1‑150 (MQ=255) aGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTCCCCGACCCACAAGCTGCTTGAGAGcc > 2:4914019/1‑150 (MQ=255) aGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGcc < 1:1382533/150‑1 (MQ=255) tGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTgc < 1:6601685/150‑1 (MQ=255) gCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTgcg > 2:2726433/1‑150 (MQ=255) aaCTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCcag < 1:6906218/150‑1 (MQ=255) aaCTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCcag > 2:1424103/1‑150 (MQ=255) cTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTaa < 1:1299062/150‑1 (MQ=255) cTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTaa < 1:7130675/150‑1 (MQ=255) cTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTaa < 2:7077893/150‑1 (MQ=255) tGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAg > 2:5360559/1‑150 (MQ=255) tGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAg < 1:3373329/150‑1 (MQ=255) tGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAg > 1:7326562/1‑150 (MQ=255) tGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAg < 1:7815332/150‑1 (MQ=255) tGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAg > 2:3789959/1‑150 (MQ=255) cgcgGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCgg > 2:3671199/1‑150 (MQ=255) gcgGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCggg < 2:3974897/150‑1 (MQ=255) gcgGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCggg < 1:3576477/150‑1 (MQ=255) tgCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTgcgc < 2:2544251/150‑1 (MQ=255) cccgatAATGCCATCGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGcgcg > 2:4428438/6‑150 (MQ=255) cccgatAATGCCATCGGCATTACCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGcgcg > 2:682208/6‑150 (MQ=255) gggTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGc > 1:1844347/1‑150 (MQ=255) gggTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGc < 2:4600396/150‑1 (MQ=255) gCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTa > 1:1866932/1‑150 (MQ=255) ccGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTaa < 1:8340330/150‑1 (MQ=255) gATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAAtc > 2:2782033/1‑150 (MQ=255) aTGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAAtct < 1:2986536/150‑1 (MQ=255) | CTGGCGGTGAGCCTGCTCGGGGATCGCTTCAGCGGCTGGGGCTTCATTGCCGGCAGCTGGCCGAAAGAGGACCTGCCGCTCAGCCGCACCGAGCGCATGGAGTTGCAGAACTTGCTGAACAGCCGCGGGCATGATGCGGGTAATGCCGATGGCATTATCGGGGCCAATACCCGCAAGGCAATCCGCAATGCCCAGCAAGGGCTGGGATGGCCGGCGGATGGCTACCCGACCCACAAGCTGCTTGAGAGCCTGCGCCAGCAGTAAGCATTCCGGGGCCGCTGCGCGGCCCCGGTAATCTC > NC_002947/5467111‑5467409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |