| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,490,151 | T→C | 18.9% | intergenic (+60/‑87) | purH → / → purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,490,151 | 0 | T | C | 18.9% | 381.4 / 82.9 | 197 | intergenic (+60/‑87) | purH/purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Reads supporting (aligned to +/- strand): ref base T (67/79); new base C (14/21); total (84/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.07e-03 | |||||||||||
Only 100 of 212 total aligned reads displayed.
GTTCGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAG > NC_002947/5490003‑5490300 | gtTCGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGAtg < 1:669271/150‑1 (MQ=255) ttCGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCCCGAATAAGAtgg > 2:6952252/1‑150 (MQ=255) tCGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGAtggt < 1:5756452/150‑1 (MQ=255) tCGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGAtggt < 1:5756772/150‑1 (MQ=255) cGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGAtggtg < 1:1523534/150‑1 (MQ=255) gATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGTTGCCCGCGAATACGAtggtgg > 2:5393875/1‑150 (MQ=255) tGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCAc > 2:6584005/1‑150 (MQ=255) gATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCAcc < 2:6303503/150‑1 (MQ=255) tGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCTCTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCAcca < 2:2062662/150‑2 (MQ=17) tGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCAccgc < 1:7828503/150‑1 (MQ=255) tGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCAccgc < 2:6243870/150‑1 (MQ=255) gCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCAccgcc < 2:1617129/150‑1 (MQ=255) gCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCAccgcc < 2:326679/150‑1 (MQ=255) tCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTcg < 1:4756537/150‑1 (MQ=255) cATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTcgc < 1:1413379/150‑1 (MQ=255) cATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTcgc < 1:5320083/150‑1 (MQ=255) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTcgcg < 1:1085852/150‑1 (MQ=255) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAAGTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTcgcg < 2:4059509/150‑1 (MQ=25) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGGTC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:2747012/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCgg < 2:2329503/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:3740925/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:8520336/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:7683758/150‑1 (MQ=255) tgctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑Caa < 1:7312405/150‑1 (MQ=25) gctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCCTGCGCCACTTCCGCCACTAATTCCGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAg < 1:4568593/150‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGGTGCCCGCGCAAACGCTGGTGGGTTCGCCGCCGCCTTCGCGGG‑CCAGc > 2:1268905/1‑150 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGc < 1:7189579/150‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGc < 1:804776/150‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGc < 1:804520/150‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGc < 1:422128/150‑1 (MQ=255) tgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGcc < 2:7934485/150‑1 (MQ=255) gCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTTCCCGCGAAAAAGATGGTGGCTTGAACGCCCCCATGGCGGG‑GAAGCCCCCGCCcaca > 2:3417639/1‑150 (MQ=255) gCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAAAACGATGGTGGATTCACCGCCGCATTAGCGGG‑CAAGCCCGCACCcacc > 2:5856302/1‑149 (MQ=255) gATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGTTGCCCGCGCAAACGATGGTGGGTTGACCGCCGCCTTCGCGGG‑CCAGCCCGCTCCCACCGGGTTCGgcgc > 2:6948082/1‑150 (MQ=255) gATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCGTGCCCGCGTCAAAGATGGTGGGTTGAACGGCGCAATCGCGGG‑CAAGCCCGCGCCCCCCGGGTTGGgcgc > 2:3573741/1‑150 (MQ=255) aTGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGTTGGCCGCGGATAAGATGTTGGTTTAACCCCCCCAGTAGCCGG‑CCAGCCCCCGCCCACCGGGGTAGGCGCa > 2:2576722/1‑150 (MQ=255) tGGTCTTCCCGGGCAGGCGCCACTCCCCCCACTAATCCCGGGTAGCCCGCGGAACGTCTCTACC‑GTGTGGGAGCGGGCTGGCCCGCTACTACGTTGGTGGATACCCCGCCGCTTGCGGGGG‑AACGCCCGCTCCCACAGTGTTCGGCGCaa < 2:1838181/150‑1 (MQ=255) tCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGTCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CGAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACg > 1:7078128/1‑150 (MQ=255) tGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGAt < 2:1435255/150‑1 (MQ=255) cATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCGTTCCCGCGAAAAACATGGTGGATTCACCCCCGCATTAGCCGG‑CAAGCCCCCAACCACACTGTTACGCGCAAGCCACGGGATCAc > 2:3495736/1‑150 (MQ=255) aTGCGCCACTTCCGCCACTAATTACGCGGATCCCGCGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTGGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACt < 2:7852589/150‑1 (MQ=255) gcCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTTCCCGCGAAAACGCTGGTGGATTCACCGCCGCAATAGCCGG‑CAAGCCCGCACCCACAGTGTTCGGCGCAAGCCACGGGATCACTTgta > 2:8035834/1‑148 (MQ=255) cACTCCCGCCACTATTTACGGGGATCCGGAGGCAAGTCGAGTCC‑CTGTGGGCGGGGGCTTGCCCGCTAATAGGATGGTGTTTTCACCGCCGCTTTCGGGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATc < 2:4642735/150‑1 (MQ=255) cTTCCGCCACTAATTCCGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCTTTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGa < 2:5619020/150‑1 (MQ=255) ttCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCGTGCCCCCGAATACGGTGGTGGATTAACCGCCGCAATAGCGGG‑CAAGCCCGCGCCCACAGTGGTCGGCGCAAGCCAACGGATAACATGAAACgcg > 2:3592407/1‑148 (MQ=255) cGCCACTAATGCCGCGTATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtt < 2:8551369/150‑1 (MQ=255) ccACTATTGCCGCGGATCCCGCGGCAAGTCGTGAGC‑CTGTGGGCGCGGGCTTGCCCGCGAATACGTTGGTGTATACCCCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt < 1:8075429/150‑1 (MQ=37) ccACTATTGACGCGGATCCGGCGGCACGTGGCGATC‑CGGGGGGCGGGGGCTTGCCCGCGAATACGTTGGGGGATTCACCGCCGCATTCGGGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtttt < 2:2704080/150‑1 (MQ=255) ccACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGTTTCCCGCCGAAACCATTGGGGGTTAAACGCCCCCATAGCGGG‑CAAGCCCGCTCCCACAGGGTTAGGCGCAACCCACCGGGTCAAGTGTAACGAGGtttt > 2:2787024/1‑150 (MQ=255) aaTTACGCGGATCCGGAGGCACGGCGAGATC‑CGGGGGGTGCGGGCTTGCCCGCGAATACGTTGGGGGATTCACCGCCGCATTCGGGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACAt < 2:8357454/150‑1 (MQ=255) ttACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTTCCCCCGAAAAAGATGGTGGCTTCACCGCCGCATTGCCGGG‑CCAGCCCGCGCCCACCGGGTTCGGCCCAAGCCACCGGAACACATGAAACCAGGTTTTTGCATGa > 2:5765944/1‑150 (MQ=255) ccggggAGCCCGCGGCATGTCGAGATC‑GTGGGGGCGGGGGCTGGCCCGCTAATACGTTGGTGGATACACCGCCGCTTTCGGGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGaaa < 1:5030052/146‑1 (MQ=255) gcgGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAAAACGATGGTGGATTCACCCCCCCAATCGCGGG‑CCAGCCCCCTCCCACACTGTTCGGCGCAAGCCCCGGGCTAACTTTAAACGAGGGTTTTTCATGAAAGt > 2:7154583/1‑150 (MQ=255) ggATCCCGAGGCAAGTCGAGATC‑CTGTGGGTGGGGGCTTGCCCGCTAATACGATGGTGTATCCACCGCCGCATTCGGGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGttt < 2:2870570/150‑1 (MQ=255) ggATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGTTGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGttt < 2:5104382/150‑1 (MQ=255) ttCCCGCGGCTAGTCGATATC‑GTGTGGGAGCGGGGTGGCCCGCTAATACTTTGGTGTATTCACCGCCGCTTTCGGGGG‑CTAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTg < 2:5583774/149‑1 (MQ=255) tCCCGAGGCATTTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCTAATACGTGGGTGTATTCACCGCCGCATTGGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGa < 2:1666062/150‑1 (MQ=38) gtgtgGGCGGGGGGTGGCCCGCCAATCCTTTGGTGGTTCCCCCGCCGAATTCGGGGG‑CACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGt < 1:6835746/149‑1 (MQ=255) gtggtcgCGGGCTTGCCCGCGACTACGAGGGTGTATTCCCCGCCGATTACGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 1:2782358/144‑1 (MQ=255) gtgGGTGCGGGCTTGCCCGCTAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:4865979/150‑1 (MQ=255) gtgGGAGCGGGCTTGCCCGCTATTACGATGGTGGATTCCCCGCCGCTTTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:7486615/150‑1 (MQ=255) gtgGGAGCGGGCTTGCCCGCTAATACGTTGGTGTATACACCGCCGATTTCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 1:2782133/150‑1 (MQ=255) gtgGGAGCGGGCTTGCCCGCGAATACGTGGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:8223009/150‑1 (MQ=255) gggggCGCGGGCTCGCCCGCTAATCGGTGGGTGTTTCCCCCGCCG‑ATTGGGGGGCCACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 1:2576722/148‑1 (MQ=255) tcgCGGGCAAGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc > 2:2244089/3‑150 (MQ=255) gggCGGGCTGGCCCGCGAATCCGTTGGTGGATTCACCGCCGCATTCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 1:5784774/148‑1 (MQ=255) cgCGGGCTTGCCCGCGAATACGAGGGTGGATCCACCGCCGAATTCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACg < 2:3933045/149‑1 (MQ=255) ggggCTTGCCCGCGATTACGTTGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGcc < 2:5033445/149‑1 (MQ=255) cGGCCTTCCCCCCGACTACGTGGGGGGATCCACCGCCGCATCCGCGGC‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGcc < 1:3441826/150‑1 (MQ=255) ttGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc > 2:3118574/1‑150 (MQ=255) ttGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc > 1:167628/1‑150 (MQ=255) gCCCGCTAATCCGCGGGTTCATCCCCCCCCGCTTTGGGGGG‑CACCCCCGCTCCCACAGTGTTCGGCACAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcct < 1:8293649/150‑1 (MQ=255) gCCCGCTAATCCGCGGGTGTATTCACCGCCGCAGTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcct < 2:315575/150‑1 (MQ=255) gCCCGCGAATCCGCTGGTGGATCCCCCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcct < 2:1203231/150‑1 (MQ=255) cccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctg > 1:8318618/1‑150 (MQ=37) ccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:3041382/1‑150 (MQ=37) ccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:3360556/1‑150 (MQ=37) ccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACAGGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:279771/1‑150 (MQ=25) ccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGAGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:3323686/1‑150 (MQ=25) ccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:8634906/1‑150 (MQ=255) ccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:1225699/1‑150 (MQ=255) ccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:562841/1‑150 (MQ=255) ccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:6160541/1‑150 (MQ=255) ccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:6408283/1‑150 (MQ=255) cgcgAATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 2:7014717/1‑150 (MQ=37) cgcgAATGCGGCGGTGAATCCACCATCATATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 2:2885116/1‑150 (MQ=37) gcgAATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:4659428/1‑150 (MQ=37) gcgAATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:844193/1‑150 (MQ=37) gcgAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:8409872/1‑150 (MQ=255) cgAATACTCTGGTGGATTCCCCGCCGCATGCGGGGC‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaaa < 2:1688991/150‑1 (MQ=255) cgAATACGTTGGTGGATTCACCGCCGCATTCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaaa < 2:3217386/150‑1 (MQ=255) gAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAg > 1:5126534/1‑150 (MQ=255) gAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAg > 2:8455356/1‑150 (MQ=255) aTACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTc < 2:7115349/150‑1 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCcaca < 1:652912/48‑1 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCcaca > 2:652912/1‑48 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 2:4418509/1‑150 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 2:3005122/1‑150 (MQ=255) ttggtggATTCACCGCCGCATTCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCa < 2:2528041/149‑1 (MQ=255) tggtggATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAg > 1:3527304/1‑150 (MQ=255) | GTTCGATGCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAG > NC_002947/5490003‑5490300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |