| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,490,164 | G→A | 18.4% | intergenic (+73/‑74) | purH → / → purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,490,164 | 0 | G | A | 18.4% | 449.2 / 89.8 | 214 | intergenic (+73/‑74) | purH/purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Reads supporting (aligned to +/- strand): ref base G (78/91); new base A (19/18); total (104/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.10e-02 | |||||||||||
Only 100 of 229 total aligned reads displayed.
TGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCG > NC_002947/5490016‑5490313 | gCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCAccgcc < 1:4610895/150‑1 (MQ=255) gCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCAccgcc < 2:1617129/150‑1 (MQ=255) tGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACcgccgc < 2:3438251/150‑1 (MQ=255) aaGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGC‑ATACGCTGGGGGATTAAACGCCGCag > 2:4979147/1‑149 (MQ=255) aGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATCCGAGGGGGGGGTACCCGCCGCCtt > 2:7834743/1‑150 (MQ=255) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTcgcg < 1:1085852/150‑1 (MQ=255) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAAGTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATGCGGCGGTGAATCCACCATCGTATTcgcg < 2:4059509/150‑1 (MQ=25) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:8305831/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:3740925/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:7754520/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCgg < 2:3030040/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:2898800/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:6589221/150‑1 (MQ=255) cGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:5373779/150‑1 (MQ=14) cGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCggg < 2:275678/150‑1 (MQ=37) gctgctGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGGTGCCCGCCA‑AAAAGGTGGTGGGTTGACCGCCCCATTCGCGGG‑c > 1:7300578/1‑150 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGc < 1:804776/150‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGc < 1:804520/150‑1 (MQ=255) ctgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGc < 1:422128/150‑1 (MQ=255) gcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGccc < 2:5095102/150‑1 (MQ=25) gCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATTGTGGATTCACCGCCGCATTCGCGGG‑CCAGCCCCCGCCcacc > 2:8017805/1‑149 (MQ=255) accgcgTTGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGCCAAGCCGAGATC‑CTGTGGGAGCGGGCTGGCCCGCTA‑ATACGATGGTGGATTCACCGCCGCATTCGGGGG‑CAAGCCCGCTCCCACAGTGTTc < 2:7129464/148‑1 (MQ=255) gATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCGTTCCCGCGC‑ATACGATGGTGGTTTTACCCCCGCCTTAGCGGG‑GCAGCCCCCGCCCCCCGTGTTGGgcgc > 2:6948225/1‑150 (MQ=255) tGGTCTTCCCGGGCAGGCGCCACTCCCCCCACTAATCCCGGGTAGCCCGCGGAACGTCTCTACC‑GTGTGGGAGCGGGCTGGCCCGCTA‑CTACGTTGGTGGATACCCCGCCGCTTGCGGGGG‑AACGCCCGCTCCCACAGTGTTCGGCGCaa < 2:1838181/150‑1 (MQ=255) gggccTTCACGGCCCTGCCCCACGCCCGCCACTCCCTCCGCGGACCCCGCGGAAAGGCGACATC‑GGGGGGGCGGGGGCTTCCCCGCTA‑ATCCGAGGGGGGATCCCCCGCCCAATCCGCGGG‑CACCCCCGCTCCCACAGTGTTCGGCGCaa < 2:352845/146‑1 (MQ=255) tCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGTCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CGAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACg > 1:7078128/1‑150 (MQ=255) tGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGAt < 2:1435255/150‑1 (MQ=255) cTTCCGCCACTAATTCCGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCTTTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGa < 2:5619020/150‑1 (MQ=255) cTTCCGCCACTAATTACGCGTATCCCGAGCCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCTA‑ATACGTTGGTGGATTCACCGCCGAATGCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGa < 2:4636013/150‑1 (MQ=38) ttCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGTTGCCCGCGA‑ATAAGATGGTGGATTGACCCCCGCATTAGCGGG‑CAAGCCCGCGCCCACACTGTTAGGCGCAAGCCACGGGATAACAAGAATCGAg > 2:3592397/1‑150 (MQ=255) ttCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCCCGACAAACCTTGG‑GGATTCCCCGCCGCAGTCGCGGG‑GCAGCCCGCGCCCACCCTGTTGGGCGCCAGCCCCCGGGTCCCATGAATCGAg > 2:7031442/1‑150 (MQ=255) cGCCACTAATGCCGCGTATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtt < 2:8551369/150‑1 (MQ=255) cGCCACAAATCCCGCGGACCCGGAGGCAAGTCGAGAGC‑GGGGGGGCGGGGGCTGGCCCGCGA‑ATAGGTTGGTGGAGTCACCGCCGAATTGGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGtt < 2:7596796/150‑1 (MQ=255) aaTTACGCGGATCCGGAGGCACGGCGAGATC‑CGGGGGGTGCGGGCTTGCCCGCGA‑ATACGTTGGGGGATTCACCGCCGCATTCGGGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACAt < 2:8357454/150‑1 (MQ=255) ttACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTTCCCCCGA‑AAAAGATGGTGGCTTCACCGCCGCATTGCCGGG‑CCAGCCCGCGCCCACCGGGTTCGGCCCAAGCCACCGGAACACATGAAACCAGGTTTTTGCATGa > 2:5765944/1‑150 (MQ=255) ccggggAGCCCGCGGCATGTCGAGATC‑GTGGGGGCGGGGGCTGGCCCGCTA‑ATACGTTGGTGGATACACCGCCGCTTTCGGGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGaaa < 1:5030052/146‑1 (MQ=255) ggATCCCGAGGCAAGTCGAGATC‑CTGTGGGTGGGGGCTTGCCCGCTA‑ATACGATGGTGTATCCACCGCCGCATTCGGGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGttt < 2:2870570/150‑1 (MQ=255) ttCCCGCGGCTAGTCGATATC‑GTGTGGGAGCGGGGTGGCCCGCTA‑ATACTTTGGTGTATTCACCGCCGCTTTCGGGGG‑CTAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTg < 2:5583774/149‑1 (MQ=255) tCCCGAGGCATTTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCTA‑ATACGTGGGTGTATTCACCGCCGCATTGGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGa < 2:1666062/150‑1 (MQ=38) gaTC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTgg < 2:7877582/150‑1 (MQ=255) agcgtgtgGGCGGGGGCTGGCCCGCCA‑ATCCTTGGGGGGTTTCCCCGCCGCATTCGGGGC‑CACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGc < 1:4939118/146‑1 (MQ=255) gtgtgGGCGGGGGGTGGCCCGCCA‑ATCCTTTGGTGGTTCCCCCGCCGAATTCGGGGG‑CACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGt < 1:6835746/149‑1 (MQ=255) gtgGGTGCGGGCTTGCCCGCTA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:4865979/150‑1 (MQ=255) gtgGGAGCGGGCTTGCCCGCTA‑ATACGTTGGTGTATACACCGCCGATTTCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 1:2782133/150‑1 (MQ=255) gtgGGAGCGGGCTTGCCCGCGA‑ATACGTGGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:8223009/150‑1 (MQ=255) gggggCGCGGGCTCGCCCGCTA‑ATCGGTGGGTGTTTCCCCCGCCG‑ATTGGGGGGCCACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 1:2576722/148‑1 (MQ=255) tcgCGGGCAAGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc > 2:2247092/3‑150 (MQ=255) gggCGGGCTGGCCCGCGA‑ATCCGTTGGTGGATTCACCGCCGCATTCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCAc < 1:5784774/148‑1 (MQ=255) cgCGGGCTTGCCCGCGA‑ATACGAGGGTGGATCCACCGCCGAATTCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACg < 2:3933045/149‑1 (MQ=255) cGGCCTTCCCCCCGA‑CTACGTGGGGGGATCCACCGCCGCATCCGCGGC‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGcc < 1:3441826/150‑1 (MQ=255) gCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 2:1380120/1‑150 (MQ=255) ttGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc > 2:3118574/1‑150 (MQ=255) gCCCGCTA‑ATCCGCGGGTGTATTCACCGCCGCAGTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcct < 2:315575/150‑1 (MQ=255) ccGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:3041382/1‑150 (MQ=37) ccGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:3360556/1‑150 (MQ=37) ccGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACAGGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:279771/1‑150 (MQ=25) ccGCGA‑ATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGAGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:3323686/1‑150 (MQ=25) ccGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:7356208/1‑150 (MQ=255) ccGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:6408283/1‑150 (MQ=255) ccGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:6160541/1‑150 (MQ=255) ccGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:1442852/1‑150 (MQ=255) ccGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 1:562841/1‑150 (MQ=255) cgcgA‑ATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 2:6292460/1‑150 (MQ=37) cgcgA‑ATGCGGCGGTGAATCCACCATCATATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 2:2885116/1‑150 (MQ=37) cgcgA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCGGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 2:2702946/1‑150 (MQ=255) cgcgA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:1184608/1‑150 (MQ=255) cgcgA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 2:2704288/1‑150 (MQ=255) gcgA‑ATGCGGCGGTGAATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:844193/1‑150 (MQ=37) gcgA‑ATGCGGCGGTGAACCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:4682599/1‑150 (MQ=37) gcgA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:1327356/1‑150 (MQ=255) gcgA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:2172683/1‑150 (MQ=255) gcgA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:8409872/1‑150 (MQ=255) cgA‑ATACTCTGGTGGATTCCCCGCCGCATGCGGGGC‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaaa < 2:1688991/150‑1 (MQ=255) cgA‑ATACGTTGGTGGATTCACCGCCGCATTCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaaa < 2:3217386/150‑1 (MQ=255) gA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAg > 1:2279449/1‑150 (MQ=255) gA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAg > 1:5218687/1‑150 (MQ=255) gA‑ATACGATGGTGGATTCACCGCCACATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAg > 2:7408706/1‑150 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCcaca > 2:652912/1‑48 (MQ=255) ggtgggtggtTTCCCCGCCGCCGGCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGACAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGcc < 2:6714287/146‑1 (MQ=255) cgttggtgtATTCCCCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAG‑TTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc < 2:1255444/147‑1 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc < 2:8661653/150‑1 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 2:4418509/1‑150 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 2:3307125/1‑150 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGACCTGGAAAGTCGccc > 1:866434/1‑150 (MQ=255) gATGGTGGATACACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc < 1:6584005/150‑1 (MQ=255) ttggtggATTCACCGCCGCATTCGCGGG‑CACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCa < 2:2528041/149‑1 (MQ=255) ggtgaATCCACCATCGTATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAgg > 1:7895332/1‑150 (MQ=39) gtggATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGa > 1:8144835/1‑150 (MQ=255) gtggATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGa > 1:3918940/1‑150 (MQ=255) tggATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGAc > 1:7656876/1‑150 (MQ=255) tggATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGAc > 1:2968940/1‑150 (MQ=255) ggATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGAcc > 2:8420306/1‑150 (MQ=255) ttCACCGCCGCTTTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAc < 2:233360/150‑1 (MQ=255) ttCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAc > 1:6287382/1‑150 (MQ=255) aCCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAcgcg > 2:5656161/1‑150 (MQ=255) aCCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCAcgcg > 2:5888233/1‑150 (MQ=255) cgccgcATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTc > 1:8171674/1‑150 (MQ=255) cgccgcATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTc > 1:8467487/1‑150 (MQ=255) cgccgcATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCACTGGCCTGGAAAGTCGCCCAGGACCCACGCGTc > 2:6242413/1‑150 (MQ=255) gccgccTGCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCg < 2:8581925/150‑1 (MQ=255) | TGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGCTTGCCCGCGA‑ATACGATGGTGGATTCACCGCCGCATTCGCGGG‑CAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCG > NC_002947/5490016‑5490313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |