| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,512,601 | G→C | 5.1% | A289P (GCG→CCG) | cycA → | D‑alanine/beta‑alanine/D‑serine/glycine permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,512,601 | 0 | G | C | 5.1% | 1266.1 / 39.3 | 372 | A289P (GCG→CCG) | cycA | D‑alanine/beta‑alanine/D‑serine/glycine permease |
| Reads supporting (aligned to +/- strand): ref base G (139/213); new base C (9/10); total (148/224) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 397 total aligned reads displayed.
CCCTGCCGCGGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGCCGTTCGGT > NC_002947/5512452‑5512749 | ccTGCCGCGGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCcggc > 2:8562027/1‑150 (MQ=255) tGCCGCGGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCcggcgg < 2:7202562/150‑1 (MQ=255) ccGCGGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCcggcggcg < 1:8092057/150‑1 (MQ=255) gggCGATCAACTCGATCCCGATCAGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCaa < 2:5259490/150‑1 (MQ=255) gATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGcat < 1:4799454/150‑1 (MQ=255) gATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGCCGCCGGCAAGcct < 2:2280793/150‑3 (MQ=255) aTCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGcatc < 2:5188132/150‑1 (MQ=255) aTCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGcatc < 2:2693643/150‑1 (MQ=255) tCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCATGCTTGCCGCCGCCGGCAAGcctgc < 2:654259/150‑5 (MQ=255) tCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGcatca < 2:1418627/150‑1 (MQ=255) tCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGcatca > 1:8315054/1‑150 (MQ=255) tCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGcatca > 1:2086717/1‑150 (MQ=255) aaCTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCatcatc > 1:509927/1‑150 (MQ=255) cTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCaa > 1:5416065/1‑150 (MQ=255) tCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAAc > 1:7284239/1‑150 (MQ=255) tCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAAc > 1:3238372/1‑150 (MQ=255) tCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAAc > 1:7089044/1‑150 (MQ=255) cgatcccgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACt > 2:3071946/1‑150 (MQ=255) gatcccgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACtt > 2:7482480/1‑150 (MQ=255) ccgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGTGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtg > 2:8281654/1‑150 (MQ=255) ccgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGTGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtg > 2:2525123/1‑150 (MQ=255) ccgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtg < 1:8769060/150‑1 (MQ=255) ccgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtg < 2:1341037/150‑1 (MQ=255) ccgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtg < 2:686877/150‑1 (MQ=255) gatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtggt < 2:7569134/150‑1 (MQ=255) gatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGG‑AAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtggtg < 1:2337362/150‑1 (MQ=255) gTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGa < 2:2586164/150‑1 (MQ=255) tATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGAc < 2:4818391/150‑1 (MQ=255) tATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGAc < 2:3624535/150‑1 (MQ=255) catcGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTc < 2:6328477/150‑1 (MQ=255) catcGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTACTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTc < 2:5495713/150‑1 (MQ=255) atcGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTcg > 1:4307326/1‑150 (MQ=255) gtTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCggcggc < 2:1285407/150‑1 (MQ=255) tATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcg < 1:5169619/150‑1 (MQ=255) tATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcg > 1:4649413/1‑150 (MQ=255) aTGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgt < 1:6043566/150‑1 (MQ=255) tgtgCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgtc > 2:5595425/1‑150 (MQ=255) tgtgCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgtc < 1:4427378/150‑1 (MQ=255) gtgCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgtcg < 1:1980899/150‑1 (MQ=255) gtgCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgtcg < 1:7464992/150‑1 (MQ=255) tGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCa > 2:284243/1‑150 (MQ=255) tGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCa > 2:734399/1‑150 (MQ=255) cTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAgc < 1:3070610/150‑1 (MQ=255) aTCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAgcggc < 2:625376/150‑1 (MQ=255) aTCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAgcggc < 1:5633946/150‑1 (MQ=255) cgcgATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCgt < 1:7886879/150‑1 (MQ=255) gcgATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCgtg < 2:7405505/150‑1 (MQ=255) cgATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCgtgt < 2:2377303/150‑1 (MQ=255) cATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTtctc < 1:2420562/150‑1 (MQ=255) cATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGGTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTtctc < 2:4680294/150‑1 (MQ=255) agggCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTcc < 1:5935082/148‑1 (MQ=255) tGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTcca > 1:3456767/1‑150 (MQ=255) tGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTcca < 1:8562027/150‑1 (MQ=255) aCCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGc > 2:798801/1‑150 (MQ=255) aCCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGc > 2:1803702/1‑150 (MQ=255) cccGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCAt > 1:6471496/1‑150 (MQ=255) cccGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCAt > 2:7760730/1‑150 (MQ=255) gTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGct < 1:4947818/150‑1 (MQ=255) gATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGc > 2:5895251/1‑150 (MQ=255) gtggtgCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTg < 2:6744120/150‑1 (MQ=255) gCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCa < 1:6935171/150‑1 (MQ=255) ccGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAgg > 2:1107301/1‑150 (MQ=255) ccGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAgg > 1:672962/1‑150 (MQ=255) cGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGa > 2:1663019/1‑150 (MQ=255) ggAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGaa > 2:4550974/1‑150 (MQ=255) ggAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGaa < 1:4016612/150‑1 (MQ=255) aaaaaGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAgg > 1:2686903/1‑150 (MQ=255) aaaGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTg < 2:3851055/150‑1 (MQ=255) aGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGAc < 1:2938797/150‑1 (MQ=255) aGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGAc < 2:7059462/150‑1 (MQ=255) gCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGAcg > 1:3687199/1‑150 (MQ=255) cgttcgttGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACgcgc > 1:1097893/1‑150 (MQ=255) cgttcgttGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACgcgc > 2:3319019/1‑150 (MQ=255) gttcgttGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGcc > 1:4520252/1‑150 (MQ=255) gttcgttGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGcc < 2:5770978/150‑1 (MQ=255) cgttGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCaa < 1:139332/150‑1 (MQ=255) gttGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAg < 2:3382715/150‑1 (MQ=255) ttGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAgg > 2:2165404/1‑150 (MQ=255) gAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAg > 1:769913/1‑129 (MQ=255) ttgttCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTc > 2:8714638/1‑150 (MQ=255) tgttCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCg < 1:6343230/150‑1 (MQ=255) tgttCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCg < 2:4135343/150‑1 (MQ=255) gttCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCga < 2:2086717/150‑1 (MQ=255) gttCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCga < 1:6630114/150‑1 (MQ=255) gttCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCga < 1:1032145/150‑1 (MQ=255) ttCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCgag < 2:5953799/150‑1 (MQ=255) tCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCgaga > 2:3534162/1‑150 (MQ=255) cGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGaa < 2:4397814/150‑1 (MQ=255) cGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGaa < 1:1762249/150‑1 (MQ=255) cTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTAGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTg < 1:6113187/150‑1 (MQ=255) ggCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTc < 1:656616/150‑1 (MQ=255) gatgCTTGCCGCCGCCGGCAAGCCTCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGa > 2:2898672/4‑150 (MQ=255) cAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGa > 2:7284040/1‑150 (MQ=255) aGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTgccctc > 1:2595127/1‑145 (MQ=255) tgCTTGCCGCCGCCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGc > 1:2796871/2‑150 (MQ=255) gCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGcc < 1:4089837/150‑1 (MQ=255) gCTTGCCGCCGCCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGcc > 1:2308163/1‑150 (MQ=255) ttGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTc < 1:5772174/132‑1 (MQ=255) ttGCCGCCGCCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGCCGt > 2:1037826/1‑150 (MQ=255) gCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGCCGTTc < 1:122176/150‑1 (MQ=255) | CCCTGCCGCGGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGCCGTTCGGT > NC_002947/5512452‑5512749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |