| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,090 | G→A | 17.2% | intergenic (+60/‑228) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,090 | 0 | G | A | 17.2% | 489.1 / 83.2 | 205 | intergenic (+60/‑228) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (49/117); new base A (10/25); total (63/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.69e-01 | |||||||||||
Only 100 of 205 total aligned reads displayed.
CGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAA > NC_002947/444942‑445238 | cGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGc < 1:4427518/150‑1 (MQ=255) gTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGt < 1:30790/150‑1 (MQ=255) tGGGAAATACCGAAGTCGAGCTAGGCGCAAAGGTAGTCAAGGCATCCGACGAAATTCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCTCGAATGCGTc < 1:4887461/150‑1 (MQ=255) gggCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGTGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTcc < 1:971066/150‑1 (MQ=255) gggCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTcc < 2:3977531/150‑1 (MQ=255) gggCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTcc < 1:4695476/150‑1 (MQ=255) gggCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTcc < 2:4026169/150‑1 (MQ=255) gggCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTcc < 1:1008701/150‑1 (MQ=255) gggCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTcc < 2:2230646/150‑1 (MQ=255) cAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGAt < 2:2270306/150‑1 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCa < 1:8420155/150‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGa < 1:506247/150‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGa < 1:5029172/150‑1 (MQ=255) cGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGaca > 2:2088564/1‑150 (MQ=39) cGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGGCCGCGCATGCGGCCGATCAGaca > 2:8235162/1‑150 (MQ=255) cGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCGCGCATGCGGCCCATCAGacc > 2:8370800/1‑149 (MQ=255) aGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGacaaaa < 1:2420399/150‑3 (MQ=38) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGGCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:420035/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGacaaaattgtt < 2:7477530/150‑8 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 1:5191096/150‑1 (MQ=255) cTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGt < 2:7194059/150‑1 (MQ=255) cTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGt < 2:4535072/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc < 2:6608643/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc < 1:4504880/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc < 2:7168239/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc < 2:8746611/150‑1 (MQ=255) cGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑t < 2:1654271/150‑1 (MQ=255) cgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGt < 1:4193893/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTc < 2:1967393/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAAAATTGTTGTC‑TGATc < 1:1485201/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGc < 2:5290437/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGc < 1:7403804/150‑1 (MQ=255) tcgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCctc < 2:2718735/150‑1 (MQ=255) cgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCggacgcat < 2:5199914/150‑7 (MQ=21) cgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCggacgcat < 1:7465070/150‑7 (MQ=21) cgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCggacgcat < 1:8561076/150‑7 (MQ=21) gtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACCACAAATTTGTC‑TGGTCGGGCCGCtt > 2:6569222/1‑150 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTcgcg < 2:7549613/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTcgcg < 1:4652375/150‑1 (MQ=255) ggCATCCGACGAATTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 1:7012474/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTGGCCCCGCAAGCGTCCCCACACACAACAAATTTTTG‑GGGTGGGGCCACGTCGCgg > 2:1037169/1‑150 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGACGAGGCCCGACCAGACAAAAGTGTTGTC‑TGATCGGACGCATTCGCgg < 2:3817895/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCgg < 1:7360022/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCgg < 1:2914856/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCgg < 2:6917137/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCgg < 2:1767820/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 1:7808907/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 1:3967348/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 2:3755896/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 2:1264667/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 1:6146847/150‑1 (MQ=18) ggCATCCGACGAAATGCGTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 2:8114029/150‑1 (MQ=18) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCggg < 1:4142529/150‑1 (MQ=255) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCggg < 2:213007/150‑1 (MQ=18) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTGGGCGCGCAAGCGTGCGAGCAGACAACCAATTTTTT‑TGGTGGGGGCGCGTGGCGGGGaa > 2:868221/1‑150 (MQ=255) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCaa < 1:7663338/150‑1 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGc < 1:5704026/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGACTACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGcc < 2:3032674/150‑1 (MQ=17) attGCTTGGCCGGATCATCGACACCTACGCCTGATTACTTGCGTCATCCCCTATTTCAGCGCCTGCATTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTc < 2:7315450/148‑1 (MQ=255) gCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCggg > 1:5939715/1‑136 (MQ=255) gCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCggg < 2:5939715/136‑1 (MQ=255) acatACGCCTGAATACTTGCGTCATCCCCTATTGCCGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCTAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCACGCCCGCTCCTACAAGGGTTTGtggcatggc < 2:5798540/147‑1 (MQ=38) cTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCCCCAATGCGTCCGAACAGAAAACAATTTTGTC‑TGGTAGGGCCTCTTAGCGGGCAATCCCGCTCCATAAGGGGTTTGTGGCATGGCAAGTCTgt > 2:5787570/1‑149 (MQ=255) tGAATACTTGCGTCAGCCCCTATTTCAGCGCCTGCCTTGCAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAt < 2:6996793/150‑1 (MQ=255) gAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTTCCCCCCAATGCGTCCGATCAGACAAACATTTTGTC‑TTGTCGGGCCTCGTAGCGGGCAAGCCCCCACCAACAAGGGGTTGTGGCATTGCAAGACGGAtt > 2:5698853/1‑150 (MQ=255) attagtggCGACACCCCCTTTTGCCGCGCCGGCCTTGTCGGCGGGGGGTTGCCCGCGATGGCGCCCGACCACAAAACAATTTGGGG‑GGGTGGGGCCTGTGGGGGGGCACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 2:4566290/143‑1 (MQ=255) aaTACTTGCGTCAGCCCCTTTTCCCGCGCCTGCCTTGTTGGCGCGGGCGTGCCCGCGATTGCGTCCGACCAGAAAACAATTTTGTC‑TGGTCGGGCTTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 2:2350985/150‑1 (MQ=37) tGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGCGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACATTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCAtt < 2:8007651/150‑1 (MQ=255) tCACCCCCTATTTCCGCGCCGGCCTTGTTGGAGCGGGCTGGCCCGCTATTGCGTCCGATCATACAACATTTTGTTG‑TGGTGGGGCCTCTTCGGGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTc < 2:551527/150‑1 (MQ=255) ccacccccTTTTCCCGCGCCGGCGTGGTCGGCGGGGGCTGGCCCGCTACTGCGCCCGACCACACAACATTTGTGTC‑TGGGGGGGCCTCTGCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTc < 2:5557780/146‑1 (MQ=255) tCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCGCCGAAGCCTCCCATGAGACAAAAAATTTTTG‑TGGTGGGGGCGCGACGCCGGCCAACCCCCCCCCACAAAGGTTTTTGGGATGGGCAGAGTTATTTGGCAattttaggg > 2:3412081/1‑146 (MQ=255) tATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTG‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGc > 2:5648757/1‑97 (MQ=255) gcgcCTGCCTTGTAGGAGGGGGCTGGCCCGCTAATGCGTCCGAAAACACAACAATTTTGTC‑TGTGCGGGCCTCTCCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCa < 2:6350735/150‑1 (MQ=255) ggcctTGTTGGCGGGGGGTGGCGGGCTATTGGGTCCGATCAGACAACTTTTTTTTG‑TGGTGGGGCCTGTGCGGGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 2:6220125/149‑1 (MQ=255) cctTGTTGGAGGGGGCGGGCCCGCGAAGGCGTCCGATCAGACAACAATTTGTGC‑GGGGCGGGCCTCTGGGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGt < 2:4397833/150‑1 (MQ=255) ttggtgggggCTGGCCGGCGATTGCGTCCTATCCCA‑AAAATTTTTGGCGTGGTGGGGCCCGTCCGGGGGAACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATc < 2:1503305/143‑1 (MQ=255) tgtcggggggTTGCCCGGTATTGCGTCCTTTCATACACCATTTTTGTG‑TGGTGGGGCCTCTCGGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:4864332/144‑1 (MQ=255) gggcggccccGCTAATGCGCCCGCTACCAAAACTTTTTTGTG‑TGCGGGGGCGTATTCGGGGCCTCGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa < 2:2403651/143‑1 (MQ=255) gggCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa > 1:8243421/1‑150 (MQ=255) ggCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTAGCGGGCAACCCCGCTCCTACAAGGGTATGTGGCATGGAATGACTGATTTTCCATTTTTCGTGGCGTAAATGTCACCATAGTCCATCCTTGACAg > 1:1327923/1‑150 (MQ=255) gCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGa > 2:1912690/1‑150 (MQ=255) gCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGa > 1:5180173/1‑150 (MQ=17) ttGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:7828669/1‑150 (MQ=255) ttGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:1762634/1‑150 (MQ=17) ttGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 2:6797688/1‑150 (MQ=17) tGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAg > 1:1297953/1‑150 (MQ=255) gCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGc > 2:2031332/1‑150 (MQ=18) cccGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:3403794/1‑150 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:7658789/1‑150 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:6391222/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg < 2:2831386/150‑1 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:8712122/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGGTTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 1:3850212/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 1:5867142/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATGTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 1:6385158/1‑150 (MQ=255) gcgAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCGCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg < 2:5003599/150‑1 (MQ=255) gAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCt > 1:4279353/1‑150 (MQ=255) gAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCt > 1:3334658/1‑150 (MQ=255) aTGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 1:2590135/1‑150 (MQ=255) tGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaaa > 2:6035748/1‑150 (MQ=255) | CGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAA > NC_002947/444942‑445238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |