| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,560,601 | T→A | 8.1% | intergenic (‑80/+94) | PP_4887 ← / ← PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,560,601 | 0 | T | A | 8.1% | 686.2 / 13.7 | 253 | intergenic (‑80/+94) | PP_4887/PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| Reads supporting (aligned to +/- strand): ref base T (88/132); new base A (19/4); total (114/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.02e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 254 total aligned reads displayed.
CGTACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGATCATCCAGCA > NC_002947/5560454‑5560750 | cGTACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑g < 1:6376299/150‑1 (MQ=255) gTACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑Gc < 2:3839132/150‑1 (MQ=255) tGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGCAAGGGCCGCAAA‑GCGGcccc > 2:3382485/1‑150 (MQ=255) tGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGcccc > 2:2329275/1‑150 (MQ=255) tCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCTAT‑GCGGcccttt < 2:7540290/150‑4 (MQ=255) aCTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTGGGGGAATGGCCGCCTA‑GCGGCCCCCGcc > 1:2316127/1‑149 (MQ=255) cAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGGAAGGGCCCCAAA‑GCGGCCCCGGCCAATTcc > 2:1458466/1‑150 (MQ=39) cAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCACGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTcc > 2:4211440/1‑150 (MQ=255) aGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGGGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCCATTTCcg > 2:4147724/1‑150 (MQ=255) ggAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTTTTTGGCGAAAGGGGCGCCTA‑GCCGCCCCCGCaagatacgc > 1:4855301/1‑143 (MQ=255) ggAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTGGGGTAAGGGGCGCCTATACGGCCCCGCAAAttaagc > 1:7562469/1‑146 (MQ=255) ggAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGCAAGGGCCGCCTA‑GCCGCCCCCGCCAAATCcgc > 2:1636466/1‑150 (MQ=255) ggAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCcgc > 2:689709/1‑150 (MQ=255) ggAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCACTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCcgc > 2:3376069/1‑150 (MQ=255) aaaTTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCgt < 2:4426997/150‑1 (MQ=255) aTTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCgtgt < 1:1945595/150‑1 (MQ=255) aTTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCATTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCgtgt < 2:6737044/150‑1 (MQ=255) ttCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCCAA‑GCGGCCCCGGCAATTTGCGCgggtt > 1:5066482/1‑149 (MQ=255) cAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATg < 2:4860452/150‑1 (MQ=255) cAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGGGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATg < 2:3149208/150‑1 (MQ=255) gTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGcaa < 1:8243249/150‑1 (MQ=255) ccTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGGCGCGTAAGGGCCGCAGA‑GCGGCCCCCGCCAATTCCGCGGGTATTcaaccaac > 2:5381348/1‑150 (MQ=255) ggCAGCGATTAGTCGGGCGGACTTGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTgg < 2:4869438/150‑1 (MQ=255) ggCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTgg < 2:8442304/150‑1 (MQ=255) ggCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTgg < 1:5835968/150‑1 (MQ=255) ggCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTGGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTgg < 1:6774631/150‑1 (MQ=255) gCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGCAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTTTGCAACAAACCAggg > 2:5456919/1‑150 (MQ=255) gCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTggg < 2:3187756/150‑1 (MQ=255) gCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCAGGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATACAACAAACCTggg < 1:4162158/150‑1 (MQ=255) gATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTGGCGGAAGGGCCCCCTA‑GCGGCCCCCGCCAATTCCGCGGGTTTTGAACAAACCGGGGgctgc > 2:2226109/1‑150 (MQ=255) gATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAAATTGCGCGTGTGTGGCACAAACCTGGGggtgc > 2:118027/1‑150 (MQ=38) aGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTAGGgctgcatag < 2:1897608/150‑5 (MQ=255) ggcGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGGAAGGGCCGCGTA‑GCGGGCCCGGCCGTTTCCGCGTGTGTGGACCAAACGGGGGGGTGGTATgg > 1:2802994/3‑149 (MQ=255) tCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCa < 2:7735226/150‑1 (MQ=255) ggCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGcc < 2:1947512/150‑1 (MQ=255) ggACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCtt < 2:4036448/150‑1 (MQ=255) gACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCATAGCAGccccag < 1:5791083/150‑4 (MQ=255) gACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCATAGCAGccccag < 1:994139/150‑4 (MQ=255) aCATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAATGGCCGCATA‑TCGGCCCCCGCAAATTCAGCGTGTATTCAACAAACCAGGGGCTGCTATTCAGCCCgtta > 2:5637222/1‑149 (MQ=38) aCATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTc < 1:6234877/150‑1 (MQ=255) aCATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTc < 1:3668751/150‑1 (MQ=255) aTGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcgc < 1:4709101/150‑1 (MQ=255) aTGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTcgc < 1:1742928/150‑1 (MQ=255) aTGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAACGGCCGCCTA‑GCGGCCCCGGCAAATTCCGCGTGTATGCACCAAACCAGGGGCTGCGATGCCGCCCTTTcgc > 2:5640190/1‑150 (MQ=38) aGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAAAAAACCTGGGGCTGCTATGCAGCCCATTCGCGac > 2:3643175/1‑150 (MQ=255) cAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGGAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGGATGCAACAAACCAGGGGCTGCTATGCAGCCCTTTCGCGacac > 2:7332342/1‑150 (MQ=255) cAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGCAAGGGCCGCAAA‑GCGGCCCCCGCAAATTACGCGTGGATGCAACAAAACAGGGGCTGCTATGCACCCCGTTCGCGacac > 2:6855939/1‑150 (MQ=37) aCTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACaa < 1:512792/150‑1 (MQ=255) tCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAGCAAACCTGGGGCTGCTATGCAGCCCGTTCGCGACACAAgg > 2:6453818/1‑150 (MQ=255) ccTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAAATTCCGCGTGTATGCAACAAAACGGGGGCTGCGATGCAGCCCTTTCGCGACACAATGc > 2:2742430/1‑150 (MQ=38) cTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTGGCGAAAGGGCCGCATA‑GGGGGCCCGGCAATTTGCGCGTGTATGGAACAATCCTGGGGGTGCTTTGCAGCCCTTTCGCGACACAAGGcc > 2:6481661/1‑150 (MQ=38) cTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCGTGTGTCGCGAAAGGGCCGCCGA‑GCGGCCCCCGCAAATTACGCGTGTGTGCAACAAACCAGGGGCTGCGATGCAGCCCGTTCGCGACACAAGGcc > 2:6149327/1‑150 (MQ=38) tttGTCTTGTGTCGCCGACAGCATAGCAACCCCGCTCTGGTGTGGGAGCGGCCTTGTGTCGCTAATGGGCCGCATA‑GCGGCCCCGGCATTTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCca < 1:1381503/150‑1 (MQ=38) cATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAg < 2:5044774/150‑1 (MQ=255) aTGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAAATTCCGCGTGTATGCAACAAACCTGGGGCTGCTATTCAGCCCTTTCGCGACACAAGGCCCACAAAgg > 2:5798323/1‑150 (MQ=255) tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTGGCGCAAGGGCCGCCCA‑GCGGCCGCGGCCAATTACCCGGGTATGGAACAAAACTGGGGCTGCGATGCAGCCCCTTCGCGGCACAACGCCCACAAAGGAcccc > 2:2422840/1‑148 (MQ=255) tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTAGTGTCGCGAAAGGGCCCCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCAGCAATGCAGCCCTGTCGCGACACAAGGCCCACAAAGGACcgc > 2:6913205/1‑150 (MQ=255) ccGACAGCATAGCAACACCGCTCTGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCa < 2:2117173/150‑1 (MQ=255) ccGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCa < 2:3616392/150‑1 (MQ=255) ccGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCCGCAATTTCCGCGTGGATGCAACAAACCAGGGGCTGCTAAGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCa > 2:6537685/1‑150 (MQ=255) gACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGCAAGGGCCGCAGA‑GCGGCCCCGGCCATTTCCGCGGGTATGCAACCAACCTGGGGCTGCGATGCAGCCCTGTCGCGGCACAAGGCCCCCCAAGGCCCCCGCAgg > 2:7047968/1‑150 (MQ=37) aGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCtt < 2:6063678/150‑1 (MQ=255) aTAGCAACACCGCTCCGGGGGGGGAGCGGCCTTGGGGCGCGAACGGGCCGCATA‑GCGGCCCCGGCAATGTCCGCGTGTATGCAACAACCCTGGGGCTGCTATGCAGCCCTTTCGCGCCACAAGGCCCACAAAGGACCGCGCAGGCTTCAg < 1:6136294/150‑1 (MQ=255) aTAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGGAAGGGCCGCCTA‑TCGGCCCCCGCCAGTTGCCCGTGGATTGAACAAACCTGGGGCTGCGTTGCCGCCCGGTCGCGGCACAACGCCCCCCAAAGACCGCCCCGGCGTCAg > 2:6808703/1‑150 (MQ=255) tAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGGGTCGCGCAAGGGCCCCAAA‑GCGGCCCCCGCCACTTCCCCGGGGGTGCCACCAAACGGGGGCTGCTATGCAGCCCGTTCGCGCCCCCAGGCCCCCAAAGGGCCCCGCCGGCGTCacg > 2:7628268/1‑148 (MQ=255) aaaCCCCGGTCTGGGGTGGGTGCGGCGTGGTGCCGCTAAAGGGCCGCAGC‑GCGGCCCCGGCAATTCCCGGGTGTATGCAACAACCCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGccc < 1:5904473/149‑1 (MQ=25) aaCACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCTATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCg < 2:2857196/150‑1 (MQ=255) acCGCTCAGGTGTGGGAGCGGCCTTGTTTGGCGCAAGGGCCCCAAA‑GCCGCCCCCGCCAATTACCCGTGGATTCAAAAAAACTGGGGCGGGGAATCAGCCCGTTCGCGCCACAAAGCCCACAAACGAACGCGCAGGCGTCAGGccccgga > 2:3953840/1‑146 (MQ=255) ccGCTCAGGTGGGGGCGCGGCCTGGGGGCGCGACCGGGCCGCATA‑GCGGCCCCGGCAATTCCCGCGTGTATGCACCAAACCTGGGGCTGCTATGCAGCCCTTTCGCGCCACAAGGCCCACAAACGACCGCGCAGGCTTCAGGCCCGGAAc < 1:559507/150‑1 (MQ=255) cGCTCTGGTGTGGGAGCGGCCTTGTGTCGCGAAATGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACt < 1:4568157/150‑1 (MQ=255) gCTCCGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTg < 1:3517164/150‑1 (MQ=255) gCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTg < 2:5913376/150‑1 (MQ=255) ctctGGTGGGGGAGGGGCCTTGTGACGCGAATGGGCCGCATC‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTgg < 1:3010165/150‑1 (MQ=38) ctggTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGcc < 1:6594818/148‑1 (MQ=255) gCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCa < 2:1282680/150‑1 (MQ=255) ccTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAg > 1:1223040/1‑150 (MQ=255) ccTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAg > 2:8313684/1‑150 (MQ=255) ttGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATGTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCt < 2:8728607/150‑1 (MQ=255) gtCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAgc < 2:4855182/150‑1 (MQ=255) gcgcgAACGGGCCGCAGC‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAgcc < 1:871385/149‑1 (MQ=255) gcgAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAgccgc > 2:5133280/1‑150 (MQ=255) cgAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAgccgcc > 1:751461/1‑150 (MQ=255) gAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAgccgccc > 1:5258208/1‑149 (MQ=255) gAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCa > 2:906159/1‑150 (MQ=255) aGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGat > 2:6480598/1‑150 (MQ=255) gggCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGatc > 1:7010483/1‑150 (MQ=255) ggCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGGCTCAGCTGCG‑CGCCAgcctg < 1:185185/150‑5 (MQ=255) ggCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGatca > 1:2223888/1‑150 (MQ=255) ggCCGCATA‑GCGGCCCCGGCAATGTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGatca < 1:7705407/150‑1 (MQ=255) gCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGGCTCAGCTGCG‑CGCCAgcctgg < 1:3939187/150‑6 (MQ=255) gCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGatcat > 1:4606394/1‑150 (MQ=255) gCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGatcat > 1:5003233/1‑150 (MQ=255) ccGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGatcatc < 1:7206063/150‑1 (MQ=255) ccGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGatcatc < 2:795622/150‑1 (MQ=255) ccGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGatcatc > 2:865688/1‑150 (MQ=255) cGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGATCATcc < 2:1377945/150‑1 (MQ=255) gCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGATCATCCa > 1:3243461/1‑150 (MQ=255) gCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGATCATCCa > 2:7271098/1‑150 (MQ=255) gCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGATCATCCa < 1:5708813/150‑1 (MQ=255) aTA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGATCATCCAGc > 1:4077633/1‑150 (MQ=255) | CGTACGCTGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATA‑GCGGCCCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGC‑GCGCAGCTGAGCCGCCAGATCATCCAGCA > NC_002947/5560454‑5560750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |