| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,645,286 | T→G | 13.9% | intergenic (+58/‑52) | PP_4950 → / → PP_4951 | hypothetical protein/EmrB/QacA family drug resistance transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,645,286 | 0 | T | G | 13.9% | 320.9 / 3.6 | 126 | intergenic (+58/‑52) | PP_4950/PP_4951 | hypothetical protein/EmrB/QacA family drug resistance transporter |
| Reads supporting (aligned to +/- strand): ref base T (66/36); new base G (17/3); total (87/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 132 total aligned reads displayed.
TGATCCTGTCGACCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCACCATCCT > NC_002947/5645137‑5645435 | tgatCCTGTCGACCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCt < 1:6443403/150‑1 (MQ=255)tgatCCTGTCGACCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCt < 2:1492619/150‑1 (MQ=255) gatCCTGTCGACCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTg < 2:5090309/150‑1 (MQ=255) atCCTGTCGACCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGt < 1:108679/150‑1 (MQ=255) tCCTGTCGACCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTa < 1:5482121/150‑1 (MQ=255) cTGTCGACCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAgg < 1:1862012/150‑1 (MQ=255) cTGTCGACCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAgg < 1:6604975/150‑1 (MQ=255) tGTCGACCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGTACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGa < 1:5405382/150‑1 (MQ=255) aCCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGc < 1:5829085/150‑1 (MQ=255) aCCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGc < 1:6079918/150‑1 (MQ=255) aCCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGc < 1:6234710/150‑1 (MQ=255) aCCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGc < 2:2689089/150‑1 (MQ=255) aCCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGc < 2:7251197/150‑1 (MQ=255) aCCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGc < 1:1366245/150‑1 (MQ=255) gTACTTATGAACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCGAAAGCCCCGCCGA‑CGAGGAACGCCTAAACCCGGGTGGAGCggggtta > 2:483049/1‑145 (MQ=255) gTACTTATGAACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTAGCGGCTAAAGCCCCTACAA‑CAAGGAAAGCGTAACCCCGGGAGGAGCGGCGTTa > 2:482877/1‑150 (MQ=255) aCTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGc < 1:1829773/150‑1 (MQ=255) aCAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAATCCGCTCCTA‑CAAGGAACGCGTAACCCCAGGAGGAGCGGCGTTATCCGCGAAAg > 2:7811319/1‑150 (MQ=255) aCAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCCAAAGCCCCGGCAA‑CAAGGCACGCCTAACCCCGGGAGGGGCGGCGTTAGCCGCGCAAg > 2:5244544/1‑150 (MQ=255) aGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCCGCGAAAGCCCCGCCGA‑CCAGGCACGCGGAACCCCGGGAGGCGCCGCGTTAGCCCCGAAAggg > 2:6369812/1‑150 (MQ=255) cgcAGTACCGGGTCGAGTCATGTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGTACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGCAACGCTTAACCCCTGTAGTAGCGGCTTTAGCCGCGAAAGGGcc < 2:2774201/150‑1 (MQ=39) gcAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCCCGCCAA‑CCACGAACCCCGAACCCCGGTGGGGGCGGCGGTAGCCCCGCAACGGccc > 2:5508795/1‑149 (MQ=255) tACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTGCTA‑CAAGGTACGCGTAACCCCTGTAGGATCGGGTTTTGCCGCGTAAGGGGCGGCAc > 2:6565181/1‑150 (MQ=38) gAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTATCGCGGCTAAAGCCGCGCCTA‑CCAGGCACGCGTAACCCCGGGAGGGGCGGCGTTAGCCGCGCAAGGGCCGGCCCGGACCAACg > 2:8743077/1‑150 (MQ=255) tttGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCGCCGA‑CAAGGCACCCGGAAACCCCGGAGGCGCGGCGTTATCCCCGCAATGGCCGGCCCCGGCAAACGCGGACg > 2:1243429/1‑150 (MQ=255) ttGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCGAAAGCCGCGCCGA‑CAAGGGACGCGTAACCCCGGGTGGGGCGGCGTTAGCCGCGCCAGGGGCCGCACTGACAAACGCgggccg > 2:7803814/1‑146 (MQ=255) ggCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCACCAA‑CACCGAACCCGTAACCCCGGTAGGAGCGGCGTTAGCCGCCGAACGGCCCGCACAGACAAACCACGACGTCATGCCCg > 2:6283136/1‑150 (MQ=255) gTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCGGTAGGAGCGGCTTTATCCGCGAAAGGGGACGCCCTGTCAAACCAGGACGTCATGCCCgcacgcac > 2:5690303/1‑150 (MQ=38) taatgggCCTGCCCCTCAATTTGTTACTGGATTTGCGGGCCTTTGCGGGGAAAACGCGGCTCCAA‑AACGCACCGGTAAACCCCTGTTGGCGGGGATTTCGCCGCTAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCAcc < 2:3396361/145‑1 (MQ=255) cAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAATCCCCGCCAA‑CAAGGGACGCGTAACCCCCGGAGGTGCGGCGTTTGCCGCCGAAGGGGCGGCACAGACAAAACAGGACGTCAAGCCCCAACGCAccc > 2:7055676/1‑150 (MQ=255) aaaGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAATCACCTCCAA‑CAAAGAAAGCCGAAAACCAGGGGGGGCGGCTTTATCCGCCAAAGGGCCCGCCCGGACAAAAGAAGACGTCAATCCCCAAcccccccc > 2:5352012/1‑150 (MQ=255) aaaGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCGTTCGCGGCGAAAGCCCCGCCGACCACGCCCCCCGAAACCCCGGT‑GGAGCGGCGGTAGCCGCGCACGGGCCGGCCCAGACAAACCAGCACCGCAAGCCCCCACCCAcccc > 2:3422658/1‑150 (MQ=255) gCCTTACCCTGACATTGTGACTGTAGTTGCGGGCCCTTTCGCGGCAAAACCCGCTCATA‑CACGTAAGGCGTAACCCCTTTTGGAGCGGATTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTg < 2:4223489/150‑1 (MQ=255) tgacATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAACGCAAGCGTAAACCCGGGTGGGGCGGCTTTATCCGCGAAAGGGCCGGGCCTGACCAACCAGGACGTCCTGCCCGTACGCACCCCGCTGGACCCCggc > 2:8569107/1‑148 (MQ=255) gacATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAATCCGCTCCTA‑CAAGGAACCCCTAAACCCGGTTGGAGCGGCGTTAGGCGCGCCAGGGCCCGCCCTGACAAACCAGGACGTCATTCCCCCACGCACCCCCCGGGGCCCCCTCa > 2:5638940/1‑150 (MQ=255) gcagttGCCGCCCCTTTCGCGGAAAAACCCGATACAA‑AAACCAACGCTAAACCCCTTTAGGCGCGGATTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGa < 2:4858252/146‑1 (MQ=255) agttGCGGCCCCTTCGGCGCATAAAGCCCCTCCTC‑CACGCAACGCTAAACCCCTGTTGGCGCGTTTTTACCCGCTAATGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATc < 2:2225172/148‑1 (MQ=255) cccGGCCCTTTCGCGGCAAAAGCCGCTCCTA‑CAAGGAACGCTTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCtt < 2:7955881/149‑1 (MQ=255) ccGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTa > 1:2717707/1‑52 (MQ=255) ccGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTa < 2:2717707/52‑1 (MQ=255) ccGCCCCTCGCGCGGCTAAAGCCGCTCCTC‑CACGCAACGCGTAACCCCGGTAGGAGCGGCTTTAGCCGCTAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTg < 2:5821524/150‑1 (MQ=255) gCCCTTTCGCGGCTAAAGCCGCTCCAA‑CAAGGAACCCGTAACCCCGGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGCCAAAAGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATACCGTGggt > 2:7880731/1‑150 (MQ=38) gcgGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCa > 2:4346440/1‑150 (MQ=255) gcgGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCa > 2:5718115/1‑150 (MQ=255) gcgGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCa > 2:6371728/1‑150 (MQ=255) gcgGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCGTGGGTGGTGGCCa > 2:507295/1‑150 (MQ=255) ggCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATc > 2:5089159/1‑150 (MQ=255) ggCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATc > 1:2506117/1‑150 (MQ=255) cTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCGGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGc > 2:2131756/1‑150 (MQ=255) tAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGcc > 2:7047765/1‑150 (MQ=255) tAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGcc > 1:3326828/1‑150 (MQ=255) tAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGcc > 1:3327296/1‑150 (MQ=255) aaaGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACCGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCct > 2:4381355/1‑150 (MQ=255) ccGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCcttctt > 2:5663914/1‑150 (MQ=255) ccGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCcttctt > 1:2783187/1‑150 (MQ=255) ccGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCcttctt > 1:8200719/1‑150 (MQ=255) cGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCttcttc > 2:1029628/1‑150 (MQ=255) gCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCa > 2:6796431/1‑150 (MQ=255) gCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCa > 1:4097904/1‑150 (MQ=255) gCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCa > 1:3260455/1‑150 (MQ=255) gCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCa > 1:3035889/1‑150 (MQ=255) cTCCTA‑CACGCCAGGCGAACCCCGTGTGGGCGGGGCTTCCGCCGCGAATGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCAt < 2:6273201/150‑1 (MQ=255) cTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCAt > 2:3262542/1‑150 (MQ=255) ccTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGc > 1:501463/1‑150 (MQ=255) cTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCa > 1:7866286/1‑150 (MQ=255) cTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCa > 2:552013/1‑150 (MQ=255) cTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCa > 2:2332503/1‑150 (MQ=255) tA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAg > 1:6786711/1‑150 (MQ=255) tA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAg > 1:6711180/1‑150 (MQ=255) tA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAg > 1:4232275/1‑150 (MQ=255) tA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAg > 1:3808963/1‑150 (MQ=255) tA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCGTGGGGGGTGGCCAGCGCCGTCTGCGTGCAg > 1:6472658/1‑150 (MQ=39) a‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGt > 1:8746081/1‑150 (MQ=255) a‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGt > 1:5652045/1‑150 (MQ=255) cAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTc > 2:8558889/1‑150 (MQ=255) cAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTc > 2:8558783/1‑150 (MQ=255) aaGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTg > 2:5490628/1‑119 (MQ=255) aaGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTg < 1:5490628/119‑1 (MQ=255) aaGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTcc > 2:8302809/1‑150 (MQ=255) aaGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTcc > 2:3537416/1‑150 (MQ=255) aGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTccc > 1:125402/1‑150 (MQ=255) ggAACGCGTACCCCCTGTTGGAGCGGATTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCt < 2:8058058/150‑1 (MQ=255) gAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAATGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTg > 1:4294282/1‑150 (MQ=255) gAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCCGTccagg > 2:912355/1‑147 (MQ=255) cgcgTAACCCCTGTAGGAGCGGCTTTAGCCGCGACAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGAc < 2:2788434/150‑1 (MQ=255) cgcgTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGAc > 1:3715331/1‑150 (MQ=255) gTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGc > 2:5146283/1‑150 (MQ=255) gTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGc > 2:1296015/1‑150 (MQ=255) gTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGACCCTGGACGGc > 1:5547300/1‑150 (MQ=255) gttccttGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCAc > 1:4661794/7‑150 (MQ=255) ccccTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCCGTCCAGGGACTGCatga < 1:912355/150‑4 (MQ=39) cccTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGa > 2:3311077/1‑98 (MQ=255) cccTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCACCAt > 1:7652728/1‑150 (MQ=255) cccTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCACCAt > 1:2865165/1‑150 (MQ=255) ccTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCACCATc > 1:2088370/1‑150 (MQ=255) ccTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCACCATc > 1:1110808/1‑150 (MQ=255) cTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCACCATcc > 2:6934638/1‑150 (MQ=255) cTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCACCATcc > 2:6934556/1‑150 (MQ=255) tGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCACCATCCt > 1:8701455/1‑150 (MQ=255) tGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCACCATCCt > 2:8339512/1‑150 (MQ=255) | TGATCCTGTCGACCAGTACTTATGGACAGCGCAGTACCGGGTCGAGTCATTTGCCCGGGGCACTGGTCAAAGGCCTGACCCTGACATTGTGACTGGACTTGCCGGCCCTTTCGCGGCTAAAGCCGCTCCTA‑CAAGGAACGCGTAACCCCTGTAGGAGCGGCTTTAGCCGCGAAAGGGCCGGCACTGACAAACGAGGACGTCATGCCCGAACGCACCCCGCTGGACCCCGTCACCGCCCGCTGGATCCCTTGGGTGGTGGCCATCGCCTTCTTCATGCAGTCCCTGGACGGCACCATCCT > NC_002947/5645137‑5645435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |