| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,118 | G→A | 19.8% | intergenic (+88/‑200) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,118 | 0 | G | A | 19.8% | 489.4 / 104.0 | 220 | intergenic (+88/‑200) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (101/74); new base A (14/29); total (115/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.67e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.81e-01 | |||||||||||
Only 100 of 226 total aligned reads displayed.
CGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGC > NC_002947/444970‑445267 | cgcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGt < 1:4193893/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAAAATTGTTGTC‑TGATc < 1:5901548/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAAAATTGTTGTC‑TGATc < 2:6066272/150‑1 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCgg < 1:6001058/150‑1 (MQ=255) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGc < 2:2104958/150‑1 (MQ=255) cgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCggacgcat < 1:8561076/150‑7 (MQ=21) cgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCggacgcat < 2:5199914/150‑7 (MQ=21) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTcgcg < 2:7549613/150‑1 (MQ=255) ggCATCCGACGAATTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 1:7012474/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGACGAGGCCCGACCAGACAAAAGTGTTGTC‑TGATCGGACGCATTCGCgg < 2:3817895/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCgg < 2:1767820/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCgg < 1:7360022/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCgg < 2:8167351/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCgg < 1:1480654/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCgg < 1:1692069/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCgg < 2:6917137/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTT‑TGATCGGACGCATTCGCgg < 1:4611471/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 2:805690/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 1:3967348/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 2:1264667/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 2:287944/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 1:7808907/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 1:625586/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCgg < 2:3755896/150‑1 (MQ=18) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGACTGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCaa < 1:7664256/150‑1 (MQ=255) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCaa < 2:6368427/150‑1 (MQ=255) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCaa < 1:3553577/150‑1 (MQ=17) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGc < 1:5704026/150‑1 (MQ=255) cgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCGCGAATGCGTCCGCTCAGACAACAAATTTGTC‑TTGTCGGGCCTCTTCGCGGGCAAGCCCg > 2:7317150/1‑150 (MQ=255) gCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCggg < 2:5939715/136‑1 (MQ=255) cGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCGCCAAATCGTACGATCAGACAACAAATTTTTG‑TGGTCGGGCCGCTTAGCGGGCAAACCCCCACCAAAAATGGGTTGtggca > 2:2800174/1‑150 (MQ=255) cccaaCGCCTGAATACTGGCTTCAGCCCCTATTTCCGCGCCGGCCTTGTCGGTGCGGGCTGGCCCGCGACGGCGGCCGAGCAGACAAAATTTTTGTC‑GGGGCGGGCCTCTCCGGGGGAACGCCCGCTCCTACAAGGGTTTGtggcatggc < 2:7031560/146‑1 (MQ=255) acatACGCCTGAATACTTGCGTCATCCCCTATTGCCGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCTAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCACGCCCGCTCCTACAAGGGTTTGtggcatggc < 2:5798540/147‑1 (MQ=38) acCTCCGCCTTAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGtggcatggc < 2:6601489/150‑1 (MQ=255) cTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCCCCAATGCGTCCGAACAGAAAACAATTTTGTC‑TGGTAGGGCCTCTTAGCGGGCAATCCCGCTCCATAAGGGGTTTGTGGCATGGCAAGTCTgt > 2:5787570/1‑149 (MQ=255) gAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTTCCCCCCAATGCGTCCGATCAGACAAACATTTTGTC‑TTGTCGGGCCTCGTAGCGGGCAAGCCCCCACCAACAAGGGGTTGTGGCATTGCAAGACGGAtt > 2:5698853/1‑150 (MQ=255) aaTACTTGCGTCAGCCCCTTTTCCCGCGCCTGCCTTGTTGGCGCGGGCGTGCCCGCGATTGCGTCCGACCAGAAAACAATTTTGTC‑TGGTCGGGCTTCTGCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGAttt < 2:2350985/150‑1 (MQ=37) tCACCCCCTATTTCCGCGCCGGCCTTGTTGGAGCGGGCTGGCCCGCTATTGCGTCCGATCATACAACATTTTGTTG‑TGGTGGGGCCTCTTCGGGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTc < 2:551527/150‑1 (MQ=255) ccacccccTTTTCCCGCGCCGGCGTGGTCGGCGGGGGCTGGCCCGCTACTGCGCCCGACCACACAACATTTGTGTC‑TGGGGGGGCCTCTGCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTc < 2:5557780/146‑1 (MQ=255) tCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCGTGCCCGCCGAAGCCTCCCATGAGACAAAAAATTTTTG‑TGGTGGGGGCGCGACGCCGGCCAACCCCCCCCCACAAAGGTTTTTGGGATGGGCAGAGTTATTTGGCAattttaggg > 2:3412081/1‑146 (MQ=255) cctTGTTGGAGGGGGCGGGCCCGCGAAGGCGTCCGATCAGACAACAATTTGTGC‑GGGGCGGGCCTCTGGGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGt < 2:4397833/150‑1 (MQ=255) ttggtgggggCTGGCCGGCGATTGCGTCCTATCCCA‑AAAATTTTTGGCGTGGTGGGGCCCGTCCGGGGGAACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATc < 2:1503305/143‑1 (MQ=255) tgtcggggggTTGCCCGGTATTGCGTCCTTTCATACACCATTTTTGTG‑TGGTGGGGCCTCTCGGGGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATcc < 2:4864332/144‑1 (MQ=255) gggCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa > 1:8244258/1‑150 (MQ=255) ggCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTAGCGGGCAACCCCGCTCCTACAAGGGTATGTGGCATGGAATGACTGATTTTCCATTTTTCGTGGCGTAAATGTCACCATAGTCCATCCTTGACAg > 1:1327923/1‑150 (MQ=255) gCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGa > 2:1912690/1‑150 (MQ=255) gCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGa > 2:3665606/1‑150 (MQ=255) gCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGGTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGa > 2:4474769/1‑150 (MQ=255) gCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGa > 1:789348/1‑150 (MQ=17) ttGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 2:6797688/1‑150 (MQ=17) ttGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:4981319/1‑150 (MQ=17) ttGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:1762634/1‑150 (MQ=17) tGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAg > 1:1297953/1‑150 (MQ=255) tGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAg > 1:4093110/1‑150 (MQ=18) gCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGc > 2:2031048/1‑150 (MQ=18) cccGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:3403794/1‑150 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 2:7658789/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACCATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCCTAGTCCATCCTTGACAGAAAGCTg > 2:8488810/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:8712122/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:3077021/1‑150 (MQ=255) cgctattGCGCCCTACCACACAACAATTTTGTG‑TGGCGGGGCCACTCCGGGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa < 2:2402072/144‑1 (MQ=255) cgctAATGCGCCCGACCAGACAACAATTTGGTC‑TGGTGGGGCCTCTGCGCGGGCACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa < 2:6435578/150‑1 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGGTTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 1:3850212/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATGTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 1:6385158/1‑150 (MQ=255) gcgAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg > 1:8787369/1‑150 (MQ=255) gAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCt > 1:3334658/1‑150 (MQ=255) aTGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaa > 1:2590135/1‑150 (MQ=255) tGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTaaa > 2:6035748/1‑150 (MQ=255) ccGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTaa > 1:8301621/1‑150 (MQ=255) ccGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTaa > 2:7860753/1‑150 (MQ=255) gaccAGACAAAATTGTTGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt > 2:7528705/4‑150 (MQ=25) aGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCa > 2:4947387/1‑150 (MQ=255) gACAACATTTTTGTG‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa < 2:6051836/150‑1 (MQ=255) acaacaATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaaa > 1:2050556/1‑150 (MQ=255) aaaaaatttttGTC‑GGGTGGGGCCTGTTGGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaaa < 1:2013494/143‑1 (MQ=255) aacaaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaact > 2:4637251/1‑149 (MQ=255) aacaaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:2453716/1‑150 (MQ=255) aacaaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:625647/1‑150 (MQ=255) aacaaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:8730568/1‑150 (MQ=255) aacaaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:5345917/1‑150 (MQ=255) aacaaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTAGACAGAAAGCTGAGCTAAACGTAAGAATCAaaca > 2:435613/1‑150 (MQ=255) caaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 1:6506180/1‑150 (MQ=255) caaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 2:2609161/1‑150 (MQ=255) aattgttGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTCAACGTAAGTTTCAaacaac > 2:2135606/6‑150 (MQ=255) aattgttGTC‑TGATCGGACGCATTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 1:7524807/6‑150 (MQ=38) aaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacagtt > 1:6724857/1‑147 (MQ=255) aaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 2:8257263/1‑150 (MQ=255) aaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 2:2448204/1‑150 (MQ=255) aaTTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 2:7964216/1‑150 (MQ=255) ttttGTG‑TGGTGGGGCCTCTTGGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGt < 2:1863711/150‑1 (MQ=255) ttttGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGt > 1:7562774/1‑150 (MQ=255) ttttGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGt > 2:3436262/1‑150 (MQ=255) gTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAGTTGTTTGa < 2:6724746/150‑1 (MQ=255) gTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACAGTTTGa > 1:286069/1‑150 (MQ=255) tC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGAt > 2:5619507/1‑150 (MQ=255) tC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGAt > 1:711573/1‑150 (MQ=255) tGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCg > 2:4268123/1‑150 (MQ=255) gTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 2:5316320/1‑150 (MQ=255) gTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 2:1038933/1‑150 (MQ=255) gTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 1:4317373/1‑150 (MQ=255) | CGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTC‑TGGTCGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGACTGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGC > NC_002947/444970‑445267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |