| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,703,768 | A→C | 10.5% | intergenic (+53/‑114) | hslU → / → PP_5002 | protease HslVU ATPase subunit/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,703,768 | 0 | A | C | 10.5% | 464.1 / 4.5 | 175 | intergenic (+53/‑114) | hslU/PP_5002 | protease HslVU ATPase subunit/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (64/87); new base C (2/22); total (66/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.13e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 179 total aligned reads displayed.
CCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAA > NC_002947/5703619‑5703916 | ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGGCAGCCCCCGCCCGCACCCGCCCCCACaa > 2:1707679/1‑150 (MQ=255) aCGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCtt < 1:4923300/150‑1 (MQ=255) aCGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTACTGCACGCGCCACCACAACCCtt < 2:1602241/150‑1 (MQ=255) cGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTg < 1:1155746/150‑1 (MQ=255) gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTgg < 2:2252076/150‑1 (MQ=255) gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTgg < 2:5727184/150‑1 (MQ=255) gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTgg < 2:1144260/150‑1 (MQ=255) gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTgg < 2:6050369/150‑1 (MQ=255) cgcgtCGATCTGGATCGGCGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGc > 1:4207099/2‑150 (MQ=255) ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgt < 2:2627463/150‑1 (MQ=255) ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgt < 1:481918/150‑1 (MQ=255) gATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTgtgg < 2:7201464/150‑1 (MQ=255) gATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTgtgg < 2:3842139/150‑1 (MQ=255) aTCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTgtggt < 2:3067100/150‑1 (MQ=255) aTCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTgtggt < 1:6583266/150‑1 (MQ=255) cgcgGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCgg < 1:5773441/150‑1 (MQ=255) cgcgGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCgg < 1:1590056/150‑1 (MQ=255) gcgTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGgggc < 2:3818695/150‑1 (MQ=255) gTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGgggcgg < 2:3920835/150‑1 (MQ=255) gTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGgggcgg < 2:3333314/150‑1 (MQ=255) gTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGgggcgg < 1:6279283/150‑1 (MQ=255) tATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGgggcggg < 2:2435209/150‑1 (MQ=255) tATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGgggcggg < 1:3190161/150‑1 (MQ=255) aTGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGgggcgggc < 1:3367455/150‑1 (MQ=255) tgtgAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGgggcggcgc > 2:833358/1‑147 (MQ=255) gtgAACAGCCACCTGGGTGAGCTGGCACAGAACGCAGACCTGTCGCGTTACATTCTGTAAGACCGGGTGCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCCCCCCACCCCGTGGGCCTGTGGTGAT‑CCGGGCGGGGGCGGGCtt < 2:2729458/150‑1 (MQ=255) gtgAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCtt < 1:7885696/150‑1 (MQ=255) tgAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTg < 1:5712050/150‑1 (MQ=255) tgAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTg < 1:7760328/150‑1 (MQ=255) aaCAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCCAGCCCGCGCCTGCACGCGCCACCACCACCCCTGGGCCGGTGGTGAT‑CCGGGCGGGGGCGGGCGTGcc > 2:7283214/1‑150 (MQ=255) aaCAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGcc < 1:8321529/150‑1 (MQ=255) aCAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGGCAGCCCGCGCCGGGACCCGCCACCACCACCCCTGGGCCGGGGGTGGT‑GCCGGCGGGGGCGGGCGTGccc > 2:551314/1‑150 (MQ=255) aCAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGGCAGCCCCCCCCGGCCCCCCCCCCCACCCCCCAAGGGCCCGGGGGGGG‑CCGggcgggggcggggggggcc > 2:2561041/1‑143 (MQ=255) aCAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGccc < 2:5495074/150‑1 (MQ=255) aCCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGGCCGCCCCCGCCGGCCACCCCCCCCCCAACCCCTGGGCCGGTGGTGGT‑GCGGGGGGGGGGGGGGGTGCCCGCGCag > 2:5214231/1‑150 (MQ=255) aCCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACACCCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAag < 2:2561250/150‑1 (MQ=255) gggTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGGCAGCCCCCGCCAGCACGCGCCACCACCACCCCTGGGGCGGTGGTGTT‑GCGGGGGGGGGCGGGGGTGGCCGCGGAGAGGc > 2:3555780/1‑150 (MQ=255) gAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAAACCCCAACATCAAGCCCCCACAAAAACCATGGGGCGGTGGTGAT‑ACCTGCGGGGGCGGGGGTGGCCCCCGAGAGGcccat > 2:4368806/1‑148 (MQ=255) tGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCCCGCCGGCCCCCCCCCCCACAAACCATGGGGCGGTGGTGTTACCGT‑CGGGGGCGGGCGTTCCCCCCCAGAGGCCCCTGaaa > 2:2065486/1‑149 (MQ=255) cGAAGACCTGTCGCGTTACTTTGTGTAAGACCGGTTTCGACTGTTTCGGGGGCACGCCGGCTCGTGCACGCGCCACCACAACCGTTGGGCGTGTGGTGAT‑CGGTGGGGGGGGGGGGTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCa < 1:7965535/150‑1 (MQ=255) cTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGGGGGGGCGGTCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTg < 2:757139/150‑1 (MQ=255) tGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTgg < 2:5644889/150‑1 (MQ=255) gTTACATTCTGTAAGACCGGTTTCGACTTTTGCGCGGGCAAGCCCGCTCCGGCACGCGCCACCACACCCCTTGGGCCTGTGGTGAT‑CCGTGGGGGGGGGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCtg < 1:5043328/150‑1 (MQ=255) ttACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCCCTACTGCACGCCCCACCACAAACCATGGGCCGGGGGTTGT‑ACGTGCGGGGGCGGGCGTGCCCGCGAAGCTGCCCATGAAACCCGCCCCCCAAAGATgggaccggg > 2:2880136/1‑143 (MQ=255) aatttCTTTATGACGGGTTTCGACTTTTCCGGGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTGGGGCGTGTGTTTTC‑GGGTGGGGGGGGGGGTTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGc < 1:2669092/147‑1 (MQ=255) aCATTCTGTAAGCCGGGTTTCGACTGTTGGGCGGGCACGCCCGCGCGTGCCCGCGCCCCCACAACCGTTGGGCCTGTGGGGAT‑CCGGGGGGGGGGGGGCTGGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGc < 1:8395093/150‑1 (MQ=255) tCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTTAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtca < 2:2353051/150‑1 (MQ=255) cTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCCCAACCCTGGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtcat < 2:4541437/150‑1 (MQ=255) cTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtcat < 2:2844988/150‑1 (MQ=255) tGTAAGACCGTTTTCGACAGTTGCGCGGGAAAGCCCGCTCCTGCACGCGCCACCACACCCCTTGGGCCTGTGGTGAT‑CCGTGGGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtcatc < 1:7119517/150‑1 (MQ=255) catAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACACCCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtcatc < 2:6735269/148‑1 (MQ=255) ttAAGACCGTTTTCTACTTTTTCGCGGGCACGCCCGCTCCTCCACGCGCCACCACACCCCTTGGGCCTGTGTTGTG‑CCGGGCGGGGGGGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtcatca < 1:1906547/149‑1 (MQ=255) ggTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCga < 2:8734382/150‑1 (MQ=255) ggTTTCGACAGTTTCGCGGGCAAGCCCGCTCCGGCACGCGCCCCCACACCCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCga < 2:5891699/150‑1 (MQ=255) tttCGACAGTTTCGGGGGCAAGCCCGCTCCTGCCCGCGCCACCACACCCCTTGGGCCTGTGGTGAT‑CGGTGGGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCgaga < 1:5063842/150‑1 (MQ=255) gACTGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACACCCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGAtt < 2:6680292/150‑1 (MQ=255) cAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCt < 2:2356041/150‑1 (MQ=255) aggggcgcgcgCACGCCCGCCCCTGCCCGCCCCCCCCCACCCCGGGGGCGTGGGGTGAG‑CCGGGCGGGGGGGGGCTGGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTg < 1:121600/145‑1 (MQ=255) tttCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACACCCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGcc < 2:4199317/150‑1 (MQ=255) ttCGCGGGCACGCCCGCTCCTGCACGCGCCACCACACCCCTTGGGCCTGTGGTGAT‑CCGTGGGGGGGGGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGccc < 1:1989973/150‑1 (MQ=255) tCGCGGGCAAGCCGGCTCCTGCACGCGCCACCACAACCGTTGGGCCTGTGGTGAT‑CGGTGGGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCa < 1:5625295/150‑1 (MQ=255) gcgGGCAAGCCCGCTCCTGCCCGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATg < 2:4779719/150‑1 (MQ=255) ggCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGcc > 2:5452216/1‑150 (MQ=255) gCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGccc > 2:1004853/1‑150 (MQ=255) cAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCg > 1:8467933/1‑150 (MQ=255) aaGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgc < 2:296766/150‑1 (MQ=255) gCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcct > 1:32354/1‑150 (MQ=255) cccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcctg > 2:1059810/1‑150 (MQ=255) ccGCTCCTGCCCGCCCCACCACACCCCTTGGGCGGGTGGTGAG‑CCGGGGGGGGGGGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcctgc < 1:4060906/150‑1 (MQ=255) ccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCGCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGTGAGATTCTGCCCATGGCCCgcctgc > 2:3993718/1‑150 (MQ=255) ccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcctgc > 2:1638640/1‑150 (MQ=255) ccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcctgc > 1:7053076/1‑150 (MQ=255) cGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcctgcc < 2:3433104/150‑1 (MQ=255) gCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCGTCATCAGCTCCCGAGAGATTCTGCACATGGCCCgcctgcct > 2:4416542/1‑150 (MQ=255) cagCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATACCACCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTATGCCCAAGGCCCCCCAGCCTAccc > 2:7476450/3‑149 (MQ=255) cTGCACGCGCCACCACACCCCTGGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCg < 1:5853745/150‑1 (MQ=255) cTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCg > 2:4628201/1‑150 (MQ=255) cTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCg > 2:8551274/1‑150 (MQ=255) cTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCg > 2:3900427/1‑150 (MQ=255) cTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCg > 1:2217983/1‑150 (MQ=255) tGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGc > 2:4835430/1‑150 (MQ=255) tGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGc > 1:6764807/1‑150 (MQ=255) gCACGCGCCACCACACCCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGcc < 2:2050210/150‑1 (MQ=255) gcgcCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCa > 1:46146/1‑150 (MQ=255) gatcaccacAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGCCAACCCCGCGAAGAGGCCCTAGAATCCCTCCCCCAAAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCaa > 2:8444029/4‑150 (MQ=255) gcCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAAc < 2:8716915/150‑1 (MQ=255) gcCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCAGAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAAc < 2:7363637/150‑1 (MQ=255) ccaccaCAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAAcc > 1:6132325/1‑150 (MQ=255) caccacAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTCCCGCCATCAACCt > 1:8684150/1‑150 (MQ=255) caccacAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCt < 2:5445726/150‑1 (MQ=255) caccacAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCt > 2:7633559/1‑150 (MQ=255) ccacAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGc < 2:8402849/150‑1 (MQ=255) cacaACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGca > 1:7359433/1‑150 (MQ=255) cacaACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGca > 2:8130663/1‑150 (MQ=255) cacaACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGca > 1:6605943/1‑150 (MQ=255) acaACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGcac > 2:2061613/1‑150 (MQ=255) caACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGcaca > 1:2828459/1‑150 (MQ=255) caACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGcaca > 2:6041538/1‑150 (MQ=255) aaCCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACaa > 1:2724960/1‑150 (MQ=255) aaCCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATACTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACaa > 2:1802704/1‑150 (MQ=255) | CCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAT‑CCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCTACCGCCATCAACCTGCACAA > NC_002947/5703619‑5703916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |