| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,729,306 | T→G | 11.3% | intergenic (‑203/+91) | PP_5024 ← / ← opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,729,306 | 0 | T | G | 11.3% | 577.7 / 8.9 | 227 | intergenic (‑203/+91) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
| Reads supporting (aligned to +/- strand): ref base T (89/98); new base G (25/8); total (121/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.08e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 236 total aligned reads displayed.
TACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCG > NC_002947/5729157‑5729455 | aCTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTg < 2:1840627/150‑1 (MQ=255) cTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTgg < 1:7127137/150‑1 (MQ=255) cTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTgg < 2:20575/150‑1 (MQ=255) cTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTgg < 1:6679889/150‑1 (MQ=255) cTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTAACCCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTgg < 1:1242955/150‑1 (MQ=255) cTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCACGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTgg < 1:7520915/150‑1 (MQ=255) ggCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCGACAAGGGCCTGTGTAT‑CCCgggga > 2:8597774/1‑148 (MQ=255) gCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAg < 1:7915697/150‑1 (MQ=255) gCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAg < 1:6498923/150‑1 (MQ=255) gCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGGGAACCCCCTCCTACAAGGGCCTGTGTAT‑CCCGGGTAg > 1:2856656/1‑150 (MQ=255) ccacgCGTCGTATCGGAGAGGGATGCGAACGCAGGGCGGCCCGTGGACCTAGAGCCGGAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGa < 2:5565100/146‑1 (MQ=255) caGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGc < 1:2698597/149‑1 (MQ=255) aGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCg < 2:8719997/150‑1 (MQ=255) aGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGCCCAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCg < 1:2342373/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGCTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 1:8444342/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGCCAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 1:7591926/150‑1 (MQ=255) gCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGCCTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCgg < 1:5717024/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCggg < 2:2526636/150‑1 (MQ=255) cgtcgtATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGCTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCggg < 1:399395/150‑1 (MQ=255) tCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCAccc < 2:3500672/150‑1 (MQ=255) gagGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGCGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACCAGGG‑ATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGaa < 1:8057739/150‑1 (MQ=21) ctacggCATGGCGGCCGGTGGACCATTCGCCGCTGGGGTATTTTGTGGGCAAATTTTGGGGGTTTCGGCA‑AAAATGATTGGGGGTTTAACCCGCACCTACATGGGTTTGTTTTT‑CCCTGGTTGGTGGGGGTTCACCCGCGAAGAGGCCCg < 2:2991718/145‑1 (MQ=255) cTAACGCAGGGCGGCCCGTGGACCTAGAGCCGCCGGGGGACTTTGTTGGCAAAAATGAGGGGGTTAGGCC‑AAAATGCTTGGCGGGTGCACCCGCTCCTACACGGGCTTGTTTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCg < 2:8479782/150‑1 (MQ=38) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAAACCCCAACAAAAAAGGCAAGTGTAT‑AACAGGTATGATCCGGTTAAACCCCCAAAAGGccccc > 1:6083832/1‑148 (MQ=255) tAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGGGAACCCGCTCCTACAAGGGCCGGTGTAT‑CCCGGGGAGGAGCGGGTTCACCCGCGAAGAGGCCCgg > 2:4309559/1‑150 (MQ=39) ggcggcCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATgcgc < 2:6472202/150‑1 (MQ=255) ggggcCCGTGGACGTTGTGCGGCAGGGGGACTTTGTTGGCCAAATGTCGGGGGTTAGGCA‑AAAAAGCTTGGGGGGTGACCCCGGGCTTACCTGGGGATGTGTTT‑CCCGGTTTGTAGCGGTTTCACCCGCGAAGAGGCCCGGTCATGCGcc < 2:8512415/148‑1 (MQ=255) ggcCCGTGGACCTAGAGCCGCCGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAACGCTTCGCGGGTGAACCCGCTCCTACACGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGcccc < 2:2094331/150‑1 (MQ=255) ggcCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCCTGTGTAT‑CCCGGGGAGGAGCGGGGTCACCCGCGGAGAGGCCCGGTCATGCGcccc > 2:5763894/1‑150 (MQ=39) ggcCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCCCTCCAACAAGGGCATGTGTAT‑ACCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGcccc > 2:5763693/1‑150 (MQ=255) gTGGACCTAGAGCCGCCGGGGTACTTTGTTGGCCAAACTGTGGGGTTTCGGCA‑AAAACGCTGCGGGGGTGAACCCGCCCCTACACGGGCATGTGTAT‑CCGGGGTCGGCGGGGGTCCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAgg < 2:4399129/150‑1 (MQ=255) gTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGTACCCCCTCCTACAAGGGCAGGGGGAT‑CCCGGGGTGGGGCGGGGTCACCCCCCGAGAGGCCCCGTCATGCGCCCCCTAgg > 2:5140992/1‑150 (MQ=255) gACCTAGAGCCGCTGGGGGACTTTGTTGGCCAACAGGCGGGGGTTAGGCC‑AAAACGCTGCGGGGGTGAACCGGGTCCTACACGGGACTGTGTAG‑CCGGGGTTGGCGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCg < 2:5236386/150‑1 (MQ=255) ccTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCCCTCCGACAAGGGCATGTGTAT‑ACCAGGGTGGTGCGGGTTGACCCCCGCAGAGGCCCCGGCATGCGCCCCCGAGGGCggg > 1:2890039/1‑150 (MQ=255) cTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAATGCTTCGCGGGTGAAACCCCTCCTACAAGGGGAAGTGTAT‑CCCAGGTAGGAGCGGGGTCACCCGCGCGGAGGCCCGGGGAAGCGCCCCGGAGGGCGGGt > 1:4224803/1‑150 (MQ=255) cTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCACCGACAAGGGGCTGTGTGT‑TCCGGGGGGGGGCGGGGTGCCCCGCGAAGATGCCCGGGCAGGCGCCCCGGAGGGCGGGt > 1:5645003/1‑150 (MQ=255) gagCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGTACCCCCGCCGACAAGGGCCGGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCCTAGGGCGGGGTCa > 2:8132422/1‑150 (MQ=38) gCCGCTGGGGGACTTTGTTGGCCAAATTGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATc < 2:6989639/150‑1 (MQ=255) cAGGGGCACTTTTTTGGCAAAAATTAGGGGTTTAGGCA‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGTAGCGGTTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCgggg < 2:7738714/150‑1 (MQ=38) cgggggACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAACCTTCGGGGGTGACCCCGCTCCTACAAGGGATTGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGgc < 2:3727110/149‑1 (MQ=39) ttgGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAAACCGCTCCGACAAGGGCAGGTGTAT‑CCCGGGGTGGAGCGGGTTCACCCCCGAAGAGGCCCCGTCAATCGCCCCGTAGGGCGGGTTAAAAGGGGCGCCCCAccgccg > 2:7621274/1‑150 (MQ=255) gCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAAACCGCTACTACAAGGGCATGTGTAT‑CCCTGGGAGGAGCGGGTTAACCCGCGGAGAGGCCCGGTCATGCGCCCCCTAGGGCGGGTTCAACGGGGCCCCGAAcccccccca > 2:635521/1‑146 (MQ=255) ccAAAATGCGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACACGGGCTTGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGaa < 2:4554778/150‑1 (MQ=255) aaaaTGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCACCAACAAGGGCCGGTGTAT‑CCCGGGTAGGAGCGGGTTCACCCCCGAACAGGCCCCCTCATGCGCCCCCAAGGGCGGGTTAATCGGGGCGCCCAAcccccccccaca > 2:4046618/1‑143 (MQ=255) tgcgggggTTAGGCC‑AAAAAGCTTCGGGGGTGAACCCGCTCCTACACGGGCTTGTTTAT‑CCCTGGTAGGAGGGGTTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGAcc < 2:3175016/147‑1 (MQ=255) cgtggggTTAACCCAAAAAAGCTCCGCGGGTTAACCCGCACCAACAAGGGAATGTGTAC‑CCCTGGTAGGAGCGGTTACACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGAcc < 1:7102698/147‑1 (MQ=255) gCC‑AAAAAGCTTCGCGGGTGAACCCGCTACTACAAGGGCAAGTGTAT‑ACCTGGGGGGCGCGGGTTCACCCGCGCAGAGGCCCGGTCATGCGCCCCGGAGGGCGGGTTCAGCGGGGCGCCGAACCGCCGCGCAAAGACCCCATCCAGCGcc > 2:735377/1‑150 (MQ=255) c‑AAAATGCTTCGGGGGTGAACCCGCTCCTACACGGGCTTGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCcga < 2:2605280/150‑1 (MQ=255) aaaaaGCTTCGCGGGTGAAACCCCACCAACAACGGCCTGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGGAGAGGCCCGGTCATGCGCCCCCTATGGCGGGTTCATAGGGGCGCCGAACCGCCGCGAAAATACCCGATCAAGCGCcgac > 2:2140948/1‑150 (MQ=255) aaaaaGCTTCGCGGGGGTAACCCCTCCAACAAGGGCCTGTGTAT‑CCCGGGGATGAGCGGGTTGACCCCCGAAGAGGCCCCGTCAATCGCCCCGTAGGGCGGGTTGATCGGGGCGCCGAACCGCCGCGAACAGACCCCCTCAAGCGCcgac > 2:4803381/1‑150 (MQ=255) aatgCTTCGCGGGTGACCCCGCTCCTACACGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCcgacga < 2:3404184/147‑1 (MQ=255) tCGCGGTTGAACCCGCCCCAACCCGGGCTTGTGTAC‑CCCGGGTCGGCGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCg < 1:7042852/150‑1 (MQ=255) gcgGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGt < 2:7896975/150‑1 (MQ=255) gTGAACCCGCTCCTACACGGGCTTGTGTAT‑CCCTGGTAGGAGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc < 2:7519864/150‑1 (MQ=255) gTGAACCCGCTCCTACACGGGCATGTGTAG‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGc < 2:5631566/150‑1 (MQ=255) gAACCCGCTCCTACACGGGCATGTGTAT‑CCCGGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCt < 2:6784149/150‑1 (MQ=255) aaCCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTg > 2:2771341/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 2:1048561/1‑150 (MQ=255) cccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCg > 1:1141782/1‑150 (MQ=255) ccGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGt > 2:3586990/1‑150 (MQ=255) gCTCCTACCAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt < 2:7982194/150‑1 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt > 1:4627965/1‑150 (MQ=255) gCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGttt < 2:4822157/150‑1 (MQ=255) cTCCTACACGGGCATGTTTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGtttt < 2:62175/150‑1 (MQ=255) cTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGtttt > 2:631516/1‑150 (MQ=255) cTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGtttt > 1:7332074/1‑150 (MQ=255) tCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTc > 2:7119375/1‑150 (MQ=255) cctccccgggCTTGTGAAC‑CCGGGGTCGGCGGGGGTCCCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCa < 1:4137173/143‑1 (MQ=255) ccTACACGGGCTTGTGTTT‑CCGTGTTTGGCGGGGGTACCCCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCa < 1:503761/150‑1 (MQ=255) cTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg > 2:7222550/1‑150 (MQ=255) cTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAg > 1:6404666/1‑150 (MQ=255) tACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAgg > 1:4038433/1‑150 (MQ=255) aCAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGt > 1:3797609/1‑132 (MQ=255) aCAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGt < 2:3797609/132‑1 (MQ=255) aCAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:1322708/1‑150 (MQ=255) aCAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg > 1:5479109/1‑150 (MQ=255) aCAAGGGCAGGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGACCAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAggg < 2:618108/150‑1 (MQ=255) cAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGt > 1:3095096/1‑150 (MQ=255) aGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGc > 2:4101957/1‑150 (MQ=255) aGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGc < 2:1395675/150‑1 (MQ=255) aTGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACgg > 1:4993568/1‑150 (MQ=255) aTGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACgg > 2:5722980/1‑150 (MQ=255) tgtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCaa > 2:956139/1‑150 (MQ=255) tgtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCaa > 1:2019135/1‑150 (MQ=255) tgtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCaa > 1:4308266/1‑150 (MQ=255) tgtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCaa > 1:8739698/1‑150 (MQ=255) ggtAG‑CCCGGGTTGGCGGGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCaa < 2:2953722/149‑1 (MQ=255) gtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 1:1864651/1‑150 (MQ=255) gtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 2:6017272/1‑150 (MQ=255) gtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 1:6695515/1‑150 (MQ=255) gtAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAAc > 2:1584336/1‑150 (MQ=255) t‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc > 2:2335941/1‑150 (MQ=255) t‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc > 1:338448/1‑150 (MQ=255) t‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgc > 2:521990/1‑150 (MQ=255) ccTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCACCGGCAACAgcgg > 2:24711/1‑150 (MQ=255) cTGGTTGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggc < 2:1548575/150‑1 (MQ=255) cTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggc > 2:435531/1‑150 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggcg > 1:3537178/1‑150 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggcg > 1:2561102/1‑150 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAgcggcg > 1:1962404/1‑150 (MQ=255) | TACTGGCCGAAGCGTCGTATCGGAGAGGGATGCTAACGCATGGCGGCCCGTGGACCTAGAGCCGCAGGGGGACTTTGTTGGCCAAAATGAGGGGGTTAGGCC‑AAAAAGCTTCGCGGGTGAACCCGCTCCTACAAGGGCATGTGTAT‑CCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCG > NC_002947/5729157‑5729455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |