| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,739,118 | C→T | 5.3% | intergenic (‑139/+18) | proY ← / ← hutH | proline (histidine) APC transporter/histidine ammonia‑lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,739,118 | 0 | C | T | 5.3% | 777.8 / 18.7 | 246 | intergenic (‑139/+18) | proY/hutH | proline (histidine) APC transporter/histidine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): ref base C (153/77); new base T (9/4); total (164/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 258 total aligned reads displayed.
TTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTCACTGCGCAGCGC > NC_002947/5738971‑5739267 | ttgttgCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCTCCCACAGGGGAAGGTGTTTTGCACCTACGTCTGGGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCa > 2:1620982/1‑150 (MQ=255) ttgCATGCCACGGCCTTTATTTGTTTTTGTGGTGGTGATTTTCCGGGGGCGGGGGCGCTGCCCCTGGGCGGGCACGCCCGCTCCCACCGGGGTTGGTTTTTTGAACATAATTCTGTGGGTGCGGCCGCGCCCGCGAA‑GGGCCGCCCAGCg < 1:7099401/150‑1 (MQ=255) gCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGc > 1:5782051/1‑150 (MQ=255) gTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCTGGGCGGccctt < 2:4376243/150‑3 (MQ=255) gTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGGGGGCGCGGGCGCGCCCCCGAA‑TGGCCGCCCAGCGGCCCCa > 2:2479061/1‑150 (MQ=255) tCACTTCCTTGATTTGTTTTTGTGGTCGTGTGTTTCTGGGGGCTGGTGCGCAGCCCCTTCGGGGGCACGCCCGCGCCCACTGGGTCTGGTTTTTTGCCCCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAg < 2:1742679/150‑1 (MQ=255) tCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAg > 2:652265/1‑150 (MQ=255) tCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCAACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAg > 2:2504933/1‑150 (MQ=255) cACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCCCAGGGGATGGGGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCTGGGCGGcccttcg < 2:8017033/150‑5 (MQ=39) aCGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCCCTCCCACACGGGGTGGTGTTTTGCACCAACATGGGGGGGAGCGGGCGCGCCCCCGCA‑AGGCCGCCCCCCGGCCCCAcgg > 1:8238098/1‑150 (MQ=255) gTCCTTTAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCACCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCTGGGCGGcccttcgcgg < 2:4574571/150‑8 (MQ=38) ccTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCCCACCCACAGGGGATGGTGTTTTGCACCAACGAATGGGGGAGCGGGCGCGCCCGCGAA‑GGGCCCCCCACCGGCCCCACGGGCGt > 1:239920/1‑150 (MQ=255) cTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTACCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGtt > 2:1932123/1‑150 (MQ=255) gAATTGTTTTTGTGGGCGTGAGATTCTGGGGGCGGCTGCGCAGCCCCTACGGGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACATACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACa < 1:7989788/150‑1 (MQ=255) aaTTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCCGCGGCCCCCGGGGCGGTACAg > 2:3226601/1‑150 (MQ=255) tGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACACGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCCCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCt > 2:5373263/1‑150 (MQ=255) gTTTTGGGGGTCGTGAGATTCCGGGGGCTGCTGCGCCGCCCCTTCGCGGGCACGCCCGCTCCCCCCGGGGATGGTGTTTTGCACCTACTTCGGTGGGCGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCtt < 1:4281204/150‑1 (MQ=255) tgGTCGTTAGTTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGTTGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTa < 2:3914521/150‑1 (MQ=255) gTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGGTGGTGTTTTGCACCTACGTCGGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACAccc > 2:4921181/1‑150 (MQ=255) gagaTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCCCAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACccgc > 2:8461508/1‑150 (MQ=255) cgcgaaggggCTGCGCAGCAGCCCCTTCGCGGGCACGCCCGCGCCCACAGGGGATGGTGTTTTGCACCGACTGCGGGGGGCGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGGTACCGGCGTGGCCGTACACCCGCCgg > 2:7562867/7‑150 (MQ=255) tctgggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTGGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgca < 2:2132031/147‑1 (MQ=255) tccgggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCCCCCACTGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgca < 2:2329462/147‑1 (MQ=255) cgggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGTTGGTGTTTTGCCCCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgcagc < 2:7387608/149‑1 (MQ=255) ggggCTGCTGCGCTGCCCCTTCGCGGGCACGCCCGCTCCCCCCGGGGTTGGTGTTTTGCACCTACTTCTGTGGGTGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCaa < 2:3165841/150‑1 (MQ=255) ggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCGGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCCGCGGCCCCAGGGGCGTTACCGGCTTGGCAGTACACCCGCCGGCAGCaa > 2:5494562/1‑150 (MQ=255) gtgctgcGCACCCCCTTCGGGGGCACCCCCGCTCCCACTGGGGTTGGTTTTTTCCACCAACTTGTGTGGGGGGGGGCGCGCCCGCGAA‑GGGCCGCCCTGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCg < 1:977542/149‑1 (MQ=255) gggctgcGCCGCCCCGGCGGGGGCCCGCCCGCCCCCCCCGGGGTTGGTTTTTTGCACCTACTTGTGGGGGTGGGGCCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCg < 1:3729622/148‑1 (MQ=255) tgctgcGCAGCCCCTTCGCGGGCACCCCCGCTCCCACAGGGGGTGGTGGTTTGCACCGACGTCGGGGGGGGCGGGCGCGCCCGCGCA‑GGGCCGCCCAGCGGCCCCCGGGGCGGTACAGGCGTGGCAGTACACCCGCCGGCAGCCAGCCgg > 2:5892031/1‑150 (MQ=255) ggctgcGCAGCCCCTGCGCGGGCACGCCCGCGCCCACCGGGGAGGGTGTTTTGCACCTACTGCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCgg < 2:1941995/149‑1 (MQ=255) tgcGCAGCCCCTTCGCGGGCCCGCCCGCTCCCCCTGGGGTTGGTTTTTGGCACCTACTTGTGTGGGCGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa < 1:6839655/150‑1 (MQ=255) ggcgcAGCCCCTGGGCGGGCACGCCCGCTCCCCCTGGGTTTGTTGTTTTGCACATACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa < 1:7609381/149‑1 (MQ=255) cTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCtt < 2:5693892/150‑1 (MQ=255) ttCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTg > 2:7866260/1‑150 (MQ=255) ttCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTg > 2:1499602/1‑150 (MQ=255) gcgcgGGCCCGCCCGCGCCCACTGGGTATGTTGTTTTGCACCTACTTGTGTGGGCGCGGCCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTgg < 1:7485852/149‑1 (MQ=255) gagcgGGCGTGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCGTgg > 2:6471895/3‑150 (MQ=255) cgGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCGGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCGTGGCCa > 1:1255588/1‑150 (MQ=255) gCACGCCCGCTCCCACCGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACa < 2:3142475/150‑1 (MQ=255) cACGCCGGCTCCCACTGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAg < 1:8795508/150‑1 (MQ=255) aCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAgg > 2:2428891/1‑150 (MQ=255) cccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTcc < 2:5086534/150‑1 (MQ=255) cccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTcc > 1:4001425/1‑150 (MQ=255) tCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGc > 1:2198364/1‑150 (MQ=255) ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCt > 2:1051007/1‑150 (MQ=255) cacaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtt > 2:5213884/1‑150 (MQ=255) cacaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtt > 2:8290965/1‑150 (MQ=255) cacaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtt > 1:701235/1‑150 (MQ=255) aGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTc > 1:2700928/1‑150 (MQ=255) ggggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCg < 2:4243533/150‑1 (MQ=255) ggTGTTTTGCACCTCCTTCTGGGGCAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGGACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATcc < 2:5151692/150‑1 (MQ=255) ggTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATcc > 1:2881009/1‑150 (MQ=255) gtTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGgc > 2:4770641/1‑150 (MQ=255) ttttGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGgcg > 1:4346662/1‑150 (MQ=255) ttttGCACCTACTTCTGGGGGCGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGgcg < 1:1682533/150‑1 (MQ=255) tttGCACCTAGTTGTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGgcgc < 1:1991111/150‑1 (MQ=255) gCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCgaa > 2:2526292/1‑150 (MQ=255) cTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAgg < 2:8515377/117‑1 (MQ=255) cTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGaaa > 1:1411221/1‑150 (MQ=255) cTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacgg < 2:5537303/150‑1 (MQ=255) ttCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggt > 1:5474003/1‑150 (MQ=255) ttCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggt > 1:2004443/1‑150 (MQ=255) ttCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggt > 1:4950903/1‑150 (MQ=255) gtCTGTGGGAGCGGGCGCGCCCGCGAA‑TGGCCGCCCAGCGGCCCCAGGGGCGTTAAAGGCTAGTCAGTACACACGCCGGCAGCAAGCCGGACAGACTACACTTGGCCAACAGTTCCACGTCCTATTCGATATCCGGCGCGAAGAAacggt > 1:5545727/2‑150 (MQ=255) tCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGTGCGACGAAacggtc > 1:2954377/1‑150 (MQ=255) cTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtca < 2:2041646/150‑1 (MQ=255) cTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtca < 2:5782094/150‑1 (MQ=255) tgtgGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcac > 2:3284594/1‑150 (MQ=255) tgtgGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcac < 2:2496113/150‑1 (MQ=255) gtgGGAGCGGGCGTGCCCGCGAAGGGGCTGCGCAGCAGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcac > 1:767859/1‑150 (MQ=38) tgGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacgg > 2:6834749/1‑150 (MQ=255) tgGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacgg > 2:2392405/1‑150 (MQ=255) cttcgCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacggt > 1:6370222/5‑150 (MQ=255) ttcgCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacggtc > 1:5351854/4‑150 (MQ=255) ttcgCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacggtc > 1:6948136/4‑150 (MQ=255) ggAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacggtc > 1:6062008/1‑150 (MQ=255) tcgCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCg > 2:4113055/3‑150 (MQ=255) gAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCg < 2:8777071/150‑1 (MQ=255) gAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCg > 1:5401316/1‑150 (MQ=255) gCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTa < 2:701235/150‑1 (MQ=255) gCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTa < 2:7194181/150‑1 (MQ=255) gcgcgcCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGc > 1:3428725/1‑150 (MQ=255) gcgcgcCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGc > 2:3523412/1‑150 (MQ=255) gcgcCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCgg > 2:1300797/1‑150 (MQ=255) gcgcCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCgg < 2:1662170/150‑1 (MQ=255) gcgcCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCgg > 2:6163793/1‑150 (MQ=255) cccGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCAc > 2:6371227/1‑150 (MQ=255) ccGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCAcc > 2:7264752/1‑150 (MQ=255) ccGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCAcc > 2:7898198/1‑150 (MQ=255) cgcgAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCt < 2:4846537/150‑1 (MQ=255) gcgAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTc > 1:5950182/1‑150 (MQ=255) gcgAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTc > 2:338342/1‑150 (MQ=255) gcgAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTGTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTc > 2:8237603/1‑150 (MQ=255) cccctggggCCGCTGGGCGGCCCTAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCt > 2:7702770/7‑150 (MQ=255) gAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTCAc > 1:4853247/1‑150 (MQ=255) gccgccCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTCACTgcgc > 2:2611544/1‑150 (MQ=255) gccgccCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTCACTgcgc > 2:4127349/1‑150 (MQ=255) ccgccCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTCACTGCGCa > 1:7863732/1‑150 (MQ=255) ccgccCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTCACTGCGCa > 1:1923660/1‑150 (MQ=255) ccAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTCACTGCGCAgcgc > 1:7383632/1‑150 (MQ=255) | TTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAA‑GGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGGCACCTCACTGCGCAGCGC > NC_002947/5738971‑5739267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |