| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,745,472 | T→G | 29.4% | intergenic (+32/+39) | hutF → / ← PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,745,472 | 0 | T | G | 29.4% | 216.1 / 115.9 | 156 | intergenic (+32/+39) | hutF/PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (22/86); new base G (20/26); total (43/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.25e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.08e-01 | |||||||||||
Only 100 of 159 total aligned reads displayed.
TCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCA > NC_002947/5745323‑5745620 | tCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑Gt < 2:5069557/150‑1 (MQ=255) ccAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCa < 1:1792707/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCaa < 1:5065529/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GGGctt < 2:2826057/150‑3 (MQ=255) ggTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GGGcttgc < 2:2307509/150‑5 (MQ=255) ggTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GGGcttgc < 2:4981236/150‑5 (MQ=255) tGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGccc < 1:833914/150‑1 (MQ=255) cgAGGTGATGGTGACTGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGCTGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGa < 2:3532103/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCGGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GGGCTTGCACGCGaa < 1:5250607/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGaa < 2:1034818/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGaa < 1:3031391/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGaa < 2:4774723/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGaa < 2:6524802/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAg < 1:3917393/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCGAAg < 2:2612379/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCGAAg < 2:2421913/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCGAAg < 1:744200/150‑1 (MQ=39) aTGTGAGGGTGCATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCGAAg < 2:6829699/150‑1 (MQ=38) tgtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAgg < 1:5933529/150‑1 (MQ=255) tgtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAgg < 2:5646712/150‑1 (MQ=255) gtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GGGCTTGCACGCGAAggg < 1:5689030/150‑1 (MQ=255) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑Gt > 1:3682071/1‑133 (MQ=255) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑Gt < 2:3682071/133‑1 (MQ=255) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGt < 1:6333057/150‑1 (MQ=255) gATGGTGACTGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGaa < 1:5017015/145‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGtt < 1:1092254/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGtt < 1:4302726/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GGGCTTGCACGCGAAgggct < 2:6342186/150‑3 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCGAAgggct < 2:4784380/150‑3 (MQ=38) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCGAAgggct < 2:4784806/150‑3 (MQ=38) gATGGTGAAGGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAGGCCCGCGAAGGGtt < 1:502214/150‑1 (MQ=255) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTg < 1:4399839/150‑1 (MQ=255) tGAATGGGCACTGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCGAAGGGCTgc‑aa‑c < 1:2469103/150‑1 (MQ=38) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GGG‑GTTGAGCCCCTAGC‑GGGCAAGCCCGCCCACGGGTgc‑aa‑c > 2:5612096/1‑150 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTgc‑aa‑c < 1:311425/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTgc‑aa‑c < 2:187521/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTgc‑aa‑c < 2:1748522/150‑1 (MQ=255) tGAATGGGCAAGGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACAGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTgc‑aa‑c < 2:4927639/150‑1 (MQ=255) gCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑TGG‑ATTGAGCCCCTAGC‑CAGCAAGCCCCCGCAGGGGTGG‑AA‑CGCAAccc > 2:560412/1‑150 (MQ=255) tggtgCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GGG‑GTGGAGCCCATCCCGGGGCAACCCCCCCAGGGGTGGA‑AA‑CCCCCCCCCaaaaaa > 2:5974901/1‑150 (MQ=255) ggcgcCAGGGGCGGCATGCCCAGGAAGATGAACGCGGGCGGGCTTTGGCCACGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCACGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCa < 2:5071634/149‑1 (MQ=255) aGGGGCGGCATGCCCAGGAAGTTGAACGCGGGCGGGCTTTTGCCAAGGTGTTGCGCCTGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCACGCCCGCGATGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCAt < 2:4229533/150‑1 (MQ=255) gcggaATGCCCAGTAATATGAAAGCGGGCGGGCTTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTCAGCGTACGGGGGTT‑GCT‑TTGCAGCCCTTCGC‑TTCAAAGCCCGCTATGGTTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCAttttt < 2:7652460/150‑1 (MQ=255) ggcATGCCCAGTAAGATGAACGGGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGTTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTAc < 2:5641084/150‑1 (MQ=255) cccAGTAAGATGAACGCGGGCGGGCGTTTGCCACGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACGGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCACGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTg < 2:4356947/150‑1 (MQ=255) ccAGGAAGATGAAAGCGGGCGGGCGTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGCGCGTACCGGGGTG‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGc < 2:4363685/150‑1 (MQ=255) gatgATGAAAGCGGGCGGGCGTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGAGCTTACCGGGGTT‑GCG‑TTGCAGCCGTTCGC‑GTGCAAGCCCGCGATGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGAt < 2:5022871/147‑1 (MQ=255) tGAACGGGGGCGGGTTTTTTCCATGTTTTTGCGCCTGTTTTTGGGCTGTGCTTACGGGGTTT‑GGT‑TTGCAGCCGTTCGC‑GTGAAAGCCGGGGATGGGTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 2:1017383/150‑1 (MQ=255) ggggcggggGTTTGCCATGGTGTGGCGCCAGCTTTGGGGCTGCGCGTCCGGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGACGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAcgcccgc < 1:4357927/149‑1 (MQ=255) ggggggcgTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACGGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCATGCCCGCTAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCa < 2:8380317/147‑1 (MQ=255) ggcgggcgTTTGCAATGGTGTTGCCCCAGATTTTGGGCTGCGCGTACGGGGGTT‑GCG‑TCGCAGCCCTTCGC‑GTCAAAGCCCGCTAAGGGTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCa < 2:1842150/150‑1 (MQ=255) cgTTGGCCCCGGTGTGGCGCCAGCTTTGGGGCTGCGCGTACGGGGGTG‑GCG‑TTGCCGCCCTGCGC‑GTGCAAGCCGGCGACGGGTTGC‑AC‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCaa < 2:309226/150‑1 (MQ=255) gccttggTTTTGCGCCTGTTTTTGGGGTGTG‑GTTCGGGGGTT‑GGGTTTGCCCCCTTGCGG‑GTGCACGCCCG‑GTTTGGTTTC‑AACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGc < 1:6291716/145‑1 (MQ=255) cacggTGTTGCGCCAGCTTTTGGGCTGCGCGTACCGGGGTT‑GCG‑TGGCCGCCCTTCGC‑GGGCACGCCCGCGACGGGTTGC‑AA‑CGCAACCCCAAAACACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTg < 2:7690590/147‑1 (MQ=255) cAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTg < 2:7190033/150‑1 (MQ=255) gtgtTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGACGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGgtgt < 2:3494362/150‑1 (MQ=255) tgtTGCGCCCTCTTTTGGGCTGAGCTTACGGGGGTT‑GCT‑TTGCAGCCGTTCGG‑GTCAAAGCCCGCTATGGTTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTc < 2:3061614/150‑1 (MQ=255) gtTGCGCCTGCTTTGGGGCTGAGCGTACCGGGGTT‑GCG‑TGGCCGCCCGTCGC‑GTGCACGCCCGCGATGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCa < 2:3786160/150‑1 (MQ=255) gtTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCTAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGTTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCa < 2:3460519/150‑1 (MQ=255) tggcgcCTGCTTTTGGGGTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGAAAGCCGGCTATGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCAt < 2:6686916/148‑1 (MQ=255) cTTTGGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCACGCCCGCTACGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctgct < 1:5858898/150‑1 (MQ=255) ttGGGCGGAGGGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTGGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGcc < 2:6205128/150‑1 (MQ=255) gggCTGTGGGTACGGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCcgc < 2:8387265/150‑1 (MQ=255) gggCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCcgc < 2:2096491/150‑1 (MQ=255) cTGCGCGTACGGGGGTT‑GCG‑TTGCACCCCTTCGC‑GGGCACGCCCGCGACGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGcc < 2:8105173/150‑1 (MQ=255) taggggggTT‑GCT‑TTCCCCCCGTTCGG‑GCGCACGCCCGCG‑TGGGTTGCAAA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 1:3788269/146‑1 (MQ=255) aCCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcag < 2:8010340/150‑1 (MQ=255) cGGGGTTGGCT‑TTGCAGCCCTTCGC‑GGGAACGCCCGCTATGGTTTCA‑AC‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagc < 1:4849482/150‑1 (MQ=255) ggggtg‑ggg‑tGGCCGCCCTCCGC‑GGGCACGCCCGCGATGGGTTGC‑AC‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagcag < 1:6319198/150‑1 (MQ=255) ggTT‑GGG‑TGGCCGCCCTGCGC‑GTCCATGCCGGCTATGGGTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGt < 1:4884859/150‑1 (MQ=255) tt‑gcg‑ttgcAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtc > 2:1281206/1‑150 (MQ=255) gcg‑tttcAGCCCTTGGG‑GTGAACGCCGGCTTGGGTTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc < 1:5664107/150‑1 (MQ=255) gcg‑ttgcCGCCCTTCGC‑GTGCAAGCCCGCGACGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc < 2:3047355/150‑1 (MQ=255) ttgcAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAATCTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 1:2930515/1‑150 (MQ=255) ttgcAACCCTTCGC‑GGGCTTGCACGCGAAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 1:6681890/1‑150 (MQ=38) gcAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAGCTCTGTGCATGTTTACTATTTGCTGATCGGGCGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGCCCGCAGGTTCTCACGCt > 2:5727212/1‑150 (MQ=255) gcAACCCTTCGC‑GGGCTTGCACGCGAAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 2:7021412/1‑150 (MQ=38) aacccTTCGC‑GGGCTTGCACGCGAAGGGCTGC‑AA‑CGCAACCCCGAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 2:4551509/3‑150 (MQ=38) cccTTCGC‑GGGCTTGCACGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca > 1:6668/1‑131 (MQ=255) ccTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 2:2787275/1‑150 (MQ=255) ccTTCGC‑GGGCTTGCACGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 1:7940559/1‑150 (MQ=255) cTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:2616860/1‑150 (MQ=255) cTTCGC‑GGGCTTGCACGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:1949778/1‑150 (MQ=255) cTTCGC‑GGGCTTGCACGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:1949892/1‑150 (MQ=255) cTTCGC‑GGGCTTGCACGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:759121/1‑150 (MQ=255) cTTCGC‑GGGCTTGCACGCGAAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:5916807/1‑150 (MQ=39) cTTCGC‑GGGCTTGCACGCGAAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:6508135/1‑150 (MQ=39) cTTCGC‑GGGCTTGCACGCGAAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:1348289/1‑150 (MQ=39) ttCGG‑GTGCACGCCCGCTATGGGTTGC‑AC‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc < 2:3147068/150‑1 (MQ=255) ttCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCTAGGc > 1:8135948/1‑150 (MQ=255) ttCGC‑GGGCTTGCACGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 2:7317262/1‑150 (MQ=255) ttCGC‑GGGCTTGCACGCGAAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 2:4667353/1‑150 (MQ=39) ttCGC‑GGGCTTGCACGCGAAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGCCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 1:1878540/1‑150 (MQ=39) tcggggTGCACCCCCGCTATGGGTTCA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc < 1:7693780/145‑1 (MQ=255) tCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 2:6152905/1‑150 (MQ=255) tCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 1:3232401/1‑150 (MQ=255) tCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 1:1021544/1‑150 (MQ=255) cgc‑gTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCg < 2:8051491/150‑1 (MQ=255) gTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCa > 1:5603313/1‑150 (MQ=255) gTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCa < 2:8580846/150‑1 (MQ=255) | TCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCGAAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCA > NC_002947/5745323‑5745620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |