| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,745,475 | A→T | 22.1% | intergenic (+35/+36) | hutF → / ← PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,745,475 | 0 | A | T | 22.1% | 282.9 / 87.1 | 149 | intergenic (+35/+36) | hutF/PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (27/88); new base T (15/18); total (43/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.71e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.81e-02 | |||||||||||
Only 100 of 155 total aligned reads displayed.
CCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGT > NC_002947/5745326‑5745624 | ccAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCa < 1:1792707/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCaa < 1:5065529/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCaa < 1:5065345/150‑1 (MQ=255) tGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGccc < 1:833914/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑aa < 2:4774788/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑aa < 2:1034818/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑aa < 2:2061919/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑aa < 1:3031391/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAg < 1:3726276/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAg < 2:6067893/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCG‑AAg < 2:2421913/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCG‑AAg < 2:2612781/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCG‑AAg < 2:4258740/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCG‑AAg < 1:744253/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCG‑AAg < 1:744200/150‑1 (MQ=39) tgtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAgg < 1:5933529/150‑1 (MQ=255) tgtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAgg < 2:5646712/150‑1 (MQ=255) gtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GGGCTTGCACGCG‑AAggg < 1:5689030/150‑1 (MQ=255) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGt < 1:6333057/150‑1 (MQ=255) gATGGTGACTGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑aa < 1:5017015/145‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑aa > 2:5017015/1‑145 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGtt < 1:1092254/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGtt < 1:4302726/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCG‑AAgggct < 2:4784380/150‑3 (MQ=38) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTg < 1:4399839/150‑1 (MQ=255) gTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GGGCTTGCACGCG‑AAGGGCTgc‑aa < 2:2324198/150‑1 (MQ=38) tGAATGGGCACTGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAACCCTTCGC‑GGGCTTGCACGCG‑AAGGGCTgc‑aa‑c < 1:2469103/150‑1 (MQ=38) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTT‑GCG‑‑TGGAGCCCCTCAC‑GTGCAACCCCGCGCACGGGTTgc‑ac > 2:5612398/1‑149 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GGG‑GTTGAGCCCCTAGC‑GGGCAAGCCCGCC‑CACGGGTgc‑aa‑c > 2:5612096/1‑150 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTgc‑aa‑c < 2:1748522/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTgc‑aa‑c < 2:187521/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTAGC‑GTGCAAGCCCGCG‑AAGGGTTgc‑aa‑c < 1:311155/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACAGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTgc‑aa‑c < 2:4927344/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACAGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTgc‑aa‑c < 2:579705/150‑1 (MQ=255) gggCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGtt < 2:4369784/140‑1 (MQ=255) gggCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGtt > 1:4369784/1‑140 (MQ=255) cAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TTGGGG‑TTGTGCCCCACCGC‑GGGCAGCCCCCCA‑AAGGGTTGA‑AA‑CCAAAccc > 2:3079714/1‑150 (MQ=255) tggtgCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GGG‑GTGGAGCCCATCCCGGGGCAACCCCCCC‑AGGGGTGGA‑AA‑CCCCCCCCCaaaaaa > 2:5974901/1‑150 (MQ=255) ggcgcCAGGGGCGGCATGCCCAGGAAGATGAACGCGGGCGGGCTTTGGCCACGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCACGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCa < 2:5071634/149‑1 (MQ=255) gcCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑GTGAAGCCCATAGC‑GGGCCACCCCCCG‑AAGGGTTGC‑AA‑ACCAACCCCAAAAAAAACAGTg > 2:5091955/1‑150 (MQ=255) ctggggCGGATGGCCCAGGACTATGAATGCGGGCGGGCTTTTGCAATGGTGTTGCGCCAGCTTTTGGGCTGCGCGTACCGGGT‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCT‑AAGGGTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCa < 2:2707035/148‑1 (MQ=255) aGGGGCGGCATGCCCAGGAAGTTGAACGCGGGCGGGCTTTTGCCAAGGTGTTGCGCCTGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCACGCCCGCG‑ATGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCAt < 2:4229533/150‑1 (MQ=255) ggcggcATGCCCAGGACGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACGGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCAtttt < 2:5644151/150‑1 (MQ=255) gcggaATGCCCAGTAATATGAAAGCGGGCGGGCTTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTCAGCGTACGGGGG‑TT‑GCT‑TTGCAGCCCTTCGC‑TTCAAAGCCCGCT‑ATGGTTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCAttttt < 2:7652460/150‑1 (MQ=255) ccAGGAAGATGAAAGCGGGCGGGCGTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGCGCGTACCGGGG‑TG‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGc < 2:4363685/150‑1 (MQ=255) gatgATGAAAGCGGGCGGGCGTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGAGCTTACCGGGG‑TT‑GCG‑TTGCAGCCGTTCGC‑GTGCAAGCCCGCG‑ATGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGAt < 2:5022871/147‑1 (MQ=255) tGAACGGGGGCGGGTTTTTTCCATGTTTTTGCGCCTGTTTTTGGGCTGTGCTTACGGGGT‑TT‑GGT‑TTGCAGCCGTTCGC‑GTGAAAGCCGGGG‑ATGGGTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 2:1017383/150‑1 (MQ=255) ggggggggGTTTGCCACGGTGTGGCGCCTGATTTTGGGCTTCGCGTCCGGGGT‑TT‑GGG‑TTGCCGCCCTGCGC‑GTGAACGCCCGCG‑ATGGGTTGC‑AC‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAcgcccgcc < 1:4231650/150‑1 (MQ=255) ggggggcgTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACGGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCATGCCCGCT‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCa < 2:8380317/147‑1 (MQ=255) ggcgggcgTTTGCAATGGTGTTGCCCCAGATTTTGGGCTGCGCGTACGGGGG‑TT‑GCG‑TCGCAGCCCTTCGC‑GTCAAAGCCCGCT‑AAGGGTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCa < 2:1842150/150‑1 (MQ=255) cgTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCaa < 2:6504539/150‑1 (MQ=255) cgTTGGCCCCGGTGTGGCGCCAGCTTTGGGGCTGCGCGTACGGGGG‑TG‑GCG‑TTGCCGCCCTGCGC‑GTGCAAGCCGGCG‑ACGGGTTGC‑AC‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCaa < 2:309226/150‑1 (MQ=255) gccttggTTTTGCGCCTGTTTTTGGGGTGTG‑GTTCGGGGG‑TT‑GGGTTTGCCCCCTTGCGG‑GTGCACGCCCG‑G‑TTTGGTTTC‑AACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGc < 1:6291716/145‑1 (MQ=255) cAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTg < 2:7190033/150‑1 (MQ=255) tggTTTTGCCCCCGCTTTTGGGCTGCGGGTACGGGGG‑TT‑GCG‑TTGCAGCCCTCCGC‑GTGCAAGCCCGCG‑ATGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGgt < 1:7933283/149‑1 (MQ=255) gtgtTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑ACGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGgtgt < 2:3494362/150‑1 (MQ=255) gtTGCGCCTGCTTTGGGGCTGAGCGTACCGGGG‑TT‑GCG‑TGGCCGCCCGTCGC‑GTGCACGCCCGCG‑ATGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCa < 2:3786160/150‑1 (MQ=255) gtTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCT‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGTTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCa < 2:3460519/150‑1 (MQ=255) tggcgcCTGCTTTTGGGGTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGAAAGCCGGCT‑ATGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCAt < 2:6686916/148‑1 (MQ=255) ccAGCTTTTGGGCTGTGCGTACCGGGT‑TT‑GCG‑TTGCAGCCCTTCGC‑TTGCACGCCCGCT‑ATGGGTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAcccc < 2:4669697/150‑1 (MQ=255) aGCTTTTGGGCTGAGCGTACGGGGT‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑ATGGGTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctg < 2:6907686/150‑1 (MQ=255) cTTTGGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCACGCCCGCT‑ACGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctgct < 1:5858898/150‑1 (MQ=255) ttGGGCTGAGGGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGAAAGCCCGCG‑TTGTGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGcc < 2:6205140/150‑1 (MQ=255) ttGGGCGGAGGGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTGGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGcc < 2:6205128/150‑1 (MQ=255) gggCTGTGGGTACGGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCcgc < 2:8387265/150‑1 (MQ=255) cTGCGCGTACGGGGG‑TT‑GCG‑TTGCACCCCTTCGC‑GGGCACGCCCGCG‑ACGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGcc < 2:8105173/150‑1 (MQ=255) tagggggg‑TT‑GCT‑TTCCCCCCGTTCGG‑GCGCACGCCCGCG‑‑TGGGTTGCAAA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 1:3788269/146‑1 (MQ=255) aCCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcag < 2:8010340/150‑1 (MQ=255) cGGGT‑TT‑GCT‑TTGCACCCCTTCGC‑GTGAAAGCCCGCT‑ACGGGTTCA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagca < 1:2813176/150‑1 (MQ=255) cGGGG‑TTGGCT‑TTGCAGCCCTTCGC‑GGGAACGCCCGCT‑ATGGTTTCA‑AC‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagc < 1:4849482/150‑1 (MQ=255) gg‑TT‑GGG‑TGGCCGCCCTGCGC‑GTCCATGCCGGCT‑ATGGGTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGt < 1:4884859/150‑1 (MQ=255) tt‑gcg‑ttgcAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtc > 2:1281206/1‑150 (MQ=255) tt‑gcg‑ttgcAACCCTTCGC‑GGGCTTGCACGCG‑AAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGCCAGCAGGTtc > 2:7581215/1‑150 (MQ=37) gcg‑tttcAGCCCTTGGG‑GTGAACGCCGGCT‑TGGGTTTGA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc < 1:5664107/150‑1 (MQ=255) gcg‑ttgcCGCCCTTCGC‑GTGCAAGCCCGCG‑ACGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc < 2:3047355/150‑1 (MQ=255) gcg‑ttgcAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc > 2:7986580/1‑150 (MQ=255) gctttgcCGCCCTTCGC‑GTGCACGCCCGCG‑ATGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc < 2:3047338/147‑1 (MQ=255) ttgcAACCCTTCGC‑GGGCTTGCACGCG‑AAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 1:6681890/1‑150 (MQ=38) gcAACCCTTCGC‑GGGCTTGCACGCG‑AAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 2:7021412/1‑150 (MQ=38) cccTTCGC‑GTGCAAGCCCGCG‑ATGGGTTGC‑AC‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCa < 1:559471/150‑1 (MQ=255) cccTTCGC‑GGGCTTGCACGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 2:6668/131‑1 (MQ=255) cccTTCGC‑GGGCTTGCACGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca > 1:6668/1‑131 (MQ=255) ccTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 2:2787275/1‑150 (MQ=255) cTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:6314887/1‑150 (MQ=255) cTTCGC‑GGGCTTGCACGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:1949778/1‑150 (MQ=255) cTTCGC‑GGGCTTGCACGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:1949892/1‑150 (MQ=255) cTTCGC‑GGGCTTGCACGCG‑AAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:6508135/1‑150 (MQ=39) cTTCGC‑GGGCTTGCACGCG‑AAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:1348289/1‑150 (MQ=39) ttCGG‑GTGCACGCCCGCT‑ATGGGTTGC‑AC‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc < 2:3147068/150‑1 (MQ=255) ttCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCTAGGc > 1:8135948/1‑150 (MQ=255) ttCGC‑GGGCTTGCACGCG‑AAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 2:4667353/1‑150 (MQ=39) ttCGC‑GGGCTTGCACGCG‑AAGGGCTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGCCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 1:1878540/1‑150 (MQ=39) tcggggTGCACCCCCGCT‑ATGGGTTCA‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc < 1:7693780/145‑1 (MQ=255) tCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 1:1021544/1‑150 (MQ=255) tCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 1:3232401/1‑150 (MQ=255) tCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 2:3564274/1‑150 (MQ=255) cgc‑gTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCg < 2:8051491/150‑1 (MQ=255) gTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCa < 2:8580846/150‑1 (MQ=255) gTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCa > 1:5603313/1‑150 (MQ=255) aaGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAgtgt < 1:7967426/150‑1 (MQ=255) | CCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCG‑TTGCAGCCCTTCGC‑GTGCAAGCCCGCG‑AAGGGTTGC‑AA‑CGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGT > NC_002947/5745326‑5745624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |