| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,745,476 | A→T | 24.8% | intergenic (+36/+35) | hutF → / ← PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,745,476 | 0 | A | T | 24.8% | 174.1 / 92.1 | 149 | intergenic (+36/+35) | hutF/PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (27/64); new base T (15/20); total (43/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.33e-02 | |||||||||||
Only 100 of 155 total aligned reads displayed.
CAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTC > NC_002947/5745327‑5745625 | cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑Caa < 1:5065529/150‑1 (MQ=255)cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑Caa < 1:5824692/150‑1 (MQ=255) cgATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAACCCTTCGCGTG‑CAAGCCCGCG‑a < 1:4542322/150‑1 (MQ=255) cgAGGTGATGGTGACTGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGCTGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑a < 2:3532103/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCGGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGGG‑CTTGCACGCG‑aa < 1:5250607/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑aa < 2:4774723/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑aa < 2:6524802/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑aa < 2:2061919/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑aa < 2:1034818/150‑1 (MQ=255) aTGTGATGGTGACTGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAACCCTTCGCGGG‑CTTGCACGCG‑AAg < 2:5029523/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAg < 1:3917393/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAg < 2:6067893/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAACCCTTCGCGGG‑CTTGCACGCG‑AAg < 1:744253/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAACCCTTCGCGGG‑CTTGCACGCG‑AAg < 2:2612379/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAACCCTTCGCGGG‑CTTGCACGCG‑AAg < 2:2421913/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAACCCTTCGCGGG‑CTTGCACGCG‑AAg < 2:4258740/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAACCCTTCGCGGG‑CTTGCACGCG‑AAg < 1:814784/150‑1 (MQ=39) tgtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAgg < 2:5646712/150‑1 (MQ=255) tgtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAgg < 1:5933904/150‑1 (MQ=255) tgtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAgg < 1:5933529/150‑1 (MQ=255) gtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGGG‑CTTGCACGCG‑AAggg < 1:5689030/150‑1 (MQ=255) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGTGTG‑CAAGCCCGCG‑AAGGGt < 1:342631/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGtt < 1:1092254/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGtt < 1:4302726/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGGG‑CTTGCACGCG‑AAgggct < 2:6342186/150‑3 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAACCCTTCGCGGG‑CTTGCACGCG‑AAgggct < 2:4784380/150‑3 (MQ=38) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAACCCTTCGCGGG‑CTTGCACGCG‑AAgggct < 2:4784806/150‑3 (MQ=38) gATGGTGAAGGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAGGCCCGCG‑AAGGGtt < 1:502214/150‑1 (MQ=255) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTg < 1:4399839/150‑1 (MQ=255) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTg < 1:1887122/150‑1 (MQ=255) tGACTGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTgc‑aac < 2:187347/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTT‑GCG‑TGGAGCCCCTCACGTG‑CAACCCCGCGCACGGGTTgc‑ac > 2:5612398/1‑149 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTgc‑aac < 1:311425/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTAGCGTG‑CAAGCCCGCG‑AAGGGTTgc‑aac < 1:311155/150‑1 (MQ=255) tGAATGGGCAAGGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACAGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTgc‑aac < 2:4927639/150‑1 (MQ=255) gggCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGtt < 2:4369784/140‑1 (MQ=255) gCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑TGGATTGAGCCCCTAGCCAG‑CAAGCCCCCG‑CAGGGGTGG‑AACGCAAccc > 2:560412/1‑150 (MQ=255) gcCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGGTGAAGCCCATAGCGGG‑CCACCCCCCG‑AAGGGTTGC‑AAACCAACCCCAAAAAAAACAGTg > 2:5091955/1‑150 (MQ=255) cggggCGGCATGCCCAGGACGATGAAAGCGGGCGGGCGTTGGCCTTGGTGTTGCGCCAGTTTTTGGGGTGTGGGTACGGGGG‑TT‑GCTTGGCCGCCGTTGGGGTG‑AAAGCCCGCG‑AGGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCAt < 2:1234677/149‑1 (MQ=255) gcggaATGCCCAGTAATATGAAAGCGGGCGGGCTTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTCAGCGTACGGGGG‑TT‑GCTTTGCAGCCCTTCGCTTC‑AAAGCCCGCT‑ATGGTTTGA‑AACGCAACCCCAAAAAACTCAGTGCAttttt < 2:7652460/150‑1 (MQ=255) ggcATGCCCAGTAAGATGAACGGGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGTTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTAc < 2:5641084/150‑1 (MQ=255) cccAGTAAGATGAACGCGGGCGGGCGTTTGCCACGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACGGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CACGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTg < 2:4356947/150‑1 (MQ=255) gatgATGAAAGCGGGCGGGCGTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGAGCTTACCGGGG‑TT‑GCGTTGCAGCCGTTCGCGTG‑CAAGCCCGCG‑ATGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGAt < 2:5022871/147‑1 (MQ=255) ggggcggggGTTTGCCATGGTGTGGCGCCAGCTTTGGGGCTGCGCGTCCGGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑ACGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAcgcccgc < 1:4357927/149‑1 (MQ=255) ggggggcgTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACGGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CATGCCCGCT‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCa < 2:8380317/147‑1 (MQ=255) ggcgggcgTTTGCAATGGTGTTGCCCCAGATTTTGGGCTGCGCGTACGGGGG‑TT‑GCGTCGCAGCCCTTCGCGTC‑AAAGCCCGCT‑AAGGGTTGA‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCa < 2:1842150/150‑1 (MQ=255) cgTTGGCCCCGGTGTGGCGCCAGCTTTGGGGCTGCGCGTACGGGGG‑TG‑GCGTTGCCGCCCTGCGCGTG‑CAAGCCGGCG‑ACGGGTTGC‑ACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCaa < 2:309226/150‑1 (MQ=255) cacggTGTTGCGCCTGCTTTTGGGCTGCGCGTACGGGGG‑TT‑GCGTTGCAGCCCTGCGCGTG‑CACGCCCGCG‑ACGGGTTGC‑ACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTg < 2:310327/147‑1 (MQ=255) cAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTg < 2:7190033/150‑1 (MQ=255) tgttgtTGCGCCAGTTTTGGGGGTGAG‑GTTCCGGGG‑TTGGGGTGGCCGCCCTGCG‑GTGCCAACCCCGCG‑ATGGTTTCA‑ACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGgt < 1:5647273/147‑1 (MQ=255) tggTTTTGCCCCCGCTTTTGGGCTGCGGGTACGGGGG‑TT‑GCGTTGCAGCCCTCCGCGTG‑CAAGCCCGCG‑ATGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGgt < 1:7933283/149‑1 (MQ=255) ttttGCCCCAGATTTGGGGCTGTGCGTAGGGGGG‑TT‑GCGTTGCCGCCTTGGGGGTG‑CACGCCCGCT‑TTGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTc < 1:6977240/148‑1 (MQ=255) tgtTGCGCCCTCTTTTGGGCTGAGCTTACGGGGG‑TT‑GCTTTGCAGCCGTTCGGGTC‑AAAGCCCGCT‑ATGGTTTGA‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTc < 2:3061614/150‑1 (MQ=255) gtTGCGCCTGCTTTGGGGCTGAGCGTACCGGGG‑TT‑GCGTGGCCGCCCGTCGCGTG‑CACGCCCGCG‑ATGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCa < 2:3786160/150‑1 (MQ=255) gtTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCT‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGTTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCa < 2:3460519/150‑1 (MQ=255) tggcgcCTGCTTTTGGGGTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑AAAGCCGGCT‑ATGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCAt < 2:6686916/148‑1 (MQ=255) ccAGCTTTTGGGCTGTGCGTACCGGGT‑TT‑GCGTTGCAGCCCTTCGCTTG‑CACGCCCGCT‑ATGGGTTGA‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAcccc < 2:4669697/150‑1 (MQ=255) aGCTTTTGGGCTGAGCGTACGGGGT‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑ATGGGTTGA‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctg < 2:6907686/150‑1 (MQ=255) ttGGGCTGAGGGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑AAAGCCCGCG‑TTGTGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGcc < 2:6205140/150‑1 (MQ=255) gggCTGTGGGTACGGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCcgc < 2:8387265/150‑1 (MQ=255) gggCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCcgc < 2:2096491/150‑1 (MQ=255) cTGCGCGTACGGGGG‑TT‑GCGTTGCACCCCTTCGCGGG‑CACGCCCGCG‑ACGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGcc < 2:8105173/150‑1 (MQ=255) tagggggg‑TT‑GCTTTCCCCCCGTTCGGGCG‑CACGCCCGCG‑‑TGGGTTGCAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 1:3788269/146‑1 (MQ=255) aCCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcag < 2:8010340/150‑1 (MQ=255) cGGGT‑TT‑GCTTTGCACCCCTTCGCGTG‑AAAGCCCGCT‑ACGGGTTCA‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagca < 1:2813176/150‑1 (MQ=255) gggg‑tg‑gggtGGCCGCCCTCCGCGGG‑CACGCCCGCG‑ATGGGTTGC‑ACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagcag < 1:6319198/150‑1 (MQ=255) gg‑TT‑GGGTGGCCGCCCTGCGCGTC‑CATGCCGGCT‑ATGGGTTGA‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGt < 1:4884859/150‑1 (MQ=255) tt‑gcgttgcAACCCTTCGCGGG‑CTTGCACGCG‑AAGGGCTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGCCAGCAGGTtc > 2:7581215/1‑150 (MQ=37) tggcgttgcAGCCCTTCGCGTG‑CAAGCCCGCG‑ACGGTTTGC‑ACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtc < 2:164127/148‑1 (MQ=255) gcgttgcCGCCCTTCGCGTG‑CAAGCCCGCG‑ACGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc < 2:3047355/150‑1 (MQ=255) gcgttgcAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc > 2:7986580/1‑150 (MQ=255) cgtggcAGCCCTTCGCGTG‑CACGCCCGCG‑ACGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCa < 2:347384/150‑1 (MQ=255) ttgcAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAATCTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 1:2930515/1‑150 (MQ=255) ttgcAACCCTTCGCGGG‑CTTGCACGCG‑AAGGGCTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 1:6681890/1‑150 (MQ=38) gcAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAGCTCTGTGCATGTTTACTATTTGCTGATCGGGCGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGCCCGCAGGTTCTCACGCt > 2:5727212/1‑150 (MQ=255) gcAACCCTTCGCGGG‑CTTGCACGCG‑AAGGGCTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 2:7021412/1‑150 (MQ=38) aacccTTCGCGGG‑CTTGCACGCG‑AAGGGCTGC‑AACGCAACCCCGAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 2:4551509/3‑150 (MQ=38) gCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc > 1:6368391/1‑150 (MQ=255) cccTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCa > 2:3914425/1‑150 (MQ=255) ccTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 2:2787275/1‑150 (MQ=255) ccTTCGCGGG‑CTTGCACGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 1:7940559/1‑150 (MQ=255) cTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:2616860/1‑150 (MQ=255) cTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:2066046/1‑150 (MQ=255) cTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:6314887/1‑150 (MQ=255) cTTCGCGGG‑CTTGCACGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:1949892/1‑150 (MQ=255) cTTCGCGGG‑CTTGCACGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:759121/1‑150 (MQ=255) cTTCGCGGG‑CTTGCACGCG‑AAGGGCTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:5916807/1‑150 (MQ=39) cTTCGCGGG‑CTTGCACGCG‑AAGGGCTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:1348289/1‑150 (MQ=39) cTTCGCGGG‑CTTGCACGCG‑AAGGGCTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:6508135/1‑150 (MQ=39) ttCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCTAGGc > 1:8135948/1‑150 (MQ=255) ttCGCGGG‑CTTGCACGCG‑AAGGGCTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGCCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 1:1878540/1‑150 (MQ=39) tCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 1:1021544/1‑150 (MQ=255) tCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 2:6152905/1‑150 (MQ=255) cgcgTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCg > 1:8706107/1‑150 (MQ=255) cgcgTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCg < 2:8051491/150‑1 (MQ=255) gTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCa > 1:5603313/1‑150 (MQ=255) gTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCa > 1:4919410/1‑150 (MQ=255) gTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCa < 2:8580846/150‑1 (MQ=255) aaGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAgtgt > 2:2903723/1‑150 (MQ=255) aGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTc < 2:6751859/150‑1 (MQ=255) | CAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGG‑TT‑GCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCG‑AAGGGTTGC‑AACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCGGCAGTGTC > NC_002947/5745327‑5745625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |