| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,811,365 | T→A | 5.2% | Y317N (TAC→AAC) ‡ | mrcA → | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,811,365 | 0 | T | A | 5.2% | 1405.7 / 43.8 | 420 | Y317N (TAC→AAC) ‡ | mrcA | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase |
| Reads supporting (aligned to +/- strand): ref base T (195/201); new base A (13/9); total (208/212) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.54e-01 | |||||||||||
Only 100 of 429 total aligned reads displayed.
AAATGGCCCGCGCGGAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGACCCGTGACGGCCAA > NC_002947/5811216‑5811514 | gCCCGCGCGGAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGt > 1:5550567/1‑150 (MQ=255) cccGCGCGGAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTg < 2:3494783/150‑1 (MQ=255) ccGCGCGGAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGGGCCACGGTAGCCGTgg < 2:4669891/150‑1 (MQ=255) ccGCGCGGAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGGGCCACGGTAGCCGTgg < 1:4442411/150‑1 (MQ=255) cgcgcgGAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGc > 1:2356439/1‑150 (MQ=255) cgGAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTg < 2:6836176/150‑1 (MQ=255) ggAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGTAGCCGTGGCGCtca < 1:5680392/150‑3 (MQ=255) gAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGaa < 1:1145138/150‑1 (MQ=255) gAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGaa < 2:2805831/150‑1 (MQ=255) gAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGaa > 2:2280234/1‑150 (MQ=255) aaaTGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAg < 2:2367091/150‑1 (MQ=255) aTGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCa < 1:8618111/150‑1 (MQ=255) tGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCAc > 2:5975244/1‑150 (MQ=255) gCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTcc > 1:6989067/1‑150 (MQ=255) cGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCg < 2:8300040/150‑1 (MQ=255) cGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCg > 1:3245622/1‑150 (MQ=255) ttACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCggg > 2:3288725/1‑150 (MQ=255) aCGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCGTGCTTcagggcca < 1:2495074/150‑8 (MQ=255) cGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCg > 1:4865824/1‑150 (MQ=255) cGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCg > 1:4526888/1‑150 (MQ=255) aGCGACGCCTACCCCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCAcc < 1:182759/150‑1 (MQ=255) cGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCa > 1:6152082/1‑150 (MQ=255) gACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAg < 2:5477071/150‑1 (MQ=255) gACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAg > 1:2678982/1‑150 (MQ=255) gACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGCGCCACTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAg > 2:7616757/1‑150 (MQ=255) gCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCa < 1:1930554/150‑1 (MQ=255) cTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGc > 1:7045527/1‑150 (MQ=255) cTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGc < 1:7549879/150‑1 (MQ=255) cacCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTg > 2:7690567/1‑150 (MQ=255) acCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTgg < 1:6432580/150‑1 (MQ=255) acCGAAGGCGTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACCAGGCCGGCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTgg < 2:4810073/150‑1 (MQ=255) cGACGGCTTCCGCGTCACGACCACCGTGCCTAGCGACAGGCAGGAAATGGCCAACACGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCt < 2:7124067/150‑1 (MQ=255) gAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCAc > 1:5185534/1‑134 (MQ=255) gAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTg < 2:671864/150‑1 (MQ=255) aaGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGc > 2:4913875/1‑150 (MQ=255) aaGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGc > 2:5369079/1‑150 (MQ=255) aGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCa > 1:5836795/1‑150 (MQ=255) ggCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAg < 2:3772938/150‑1 (MQ=255) ttCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCggg < 2:3179823/122‑1 (MQ=255) gcgTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTgg < 1:2987156/150‑1 (MQ=255) aCGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGgcaag > 1:7217211/1‑150 (MQ=255) aCGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGgcaag < 2:4237879/150‑1 (MQ=255) aCGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGgcaag > 1:6675752/1‑150 (MQ=255) gACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAATGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGgcaagca > 1:4158982/1‑150 (MQ=255) ccGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCa > 2:6580655/1‑150 (MQ=255) tGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCAccc > 2:2174243/1‑150 (MQ=255) gCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCt > 1:3372709/1‑150 (MQ=255) aGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCCAAAACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTggc > 2:1195198/1‑150 (MQ=255) gACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTggcggc < 1:6614861/150‑1 (MQ=255) cATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCt < 2:4540377/150‑1 (MQ=255) cATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCt < 2:3974634/150‑1 (MQ=255) cATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCt < 1:3870310/150‑1 (MQ=255) cAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGag > 2:8162922/1‑150 (MQ=255) aGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCGGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGagc < 1:8742535/150‑1 (MQ=255) aGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGagc > 1:833323/1‑150 (MQ=255) gAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGagcca > 1:8552872/1‑150 (MQ=255) gAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGagcca < 1:1374180/150‑1 (MQ=255) gCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTTCGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCTCCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCTCCCTTGGCGGCCTGGAGCCAGCCAtt < 1:4074679/150‑1 (MQ=255) gCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCAtt < 2:3884340/150‑1 (MQ=255) gCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCAtt > 2:2947154/1‑150 (MQ=255) gCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCGTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCAtt < 2:7791731/150‑1 (MQ=255) caacaaGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGTCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGt < 2:8680855/150‑1 (MQ=255) caacaaGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGt > 2:2667860/1‑150 (MQ=255) caacaaGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGt > 1:7336355/1‑150 (MQ=255) aacaaGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTc > 2:1355624/1‑150 (MQ=255) acaaGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCa < 1:6332804/150‑1 (MQ=255) acaaGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCa < 1:3711186/150‑1 (MQ=255) aaGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCAcc > 2:5271242/1‑150 (MQ=255) ggCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCa < 1:6490208/150‑1 (MQ=255) tCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAac > 2:3084916/1‑150 (MQ=255) tCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAac > 2:8502805/1‑150 (MQ=255) aaGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAacac > 1:1056305/1‑150 (MQ=255) gggCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAacacac < 2:7456254/150‑1 (MQ=255) gCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCg < 1:3767809/150‑1 (MQ=255) ctctCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGc < 1:1672184/150‑1 (MQ=255) tcCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTc > 1:6824305/1‑150 (MQ=255) tcCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTc > 2:889492/1‑150 (MQ=255) cGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCaa < 2:4027780/150‑1 (MQ=255) cGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCaa < 2:5823591/150‑1 (MQ=255) aTTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAgg < 2:5094939/150‑1 (MQ=255) ttACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGt < 2:6235242/150‑1 (MQ=255) tACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTg < 2:2646650/150‑1 (MQ=255) cGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCt > 1:472578/1‑150 (MQ=255) gATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTg > 1:7723886/1‑150 (MQ=255) gATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTg > 1:5991800/1‑150 (MQ=255) gATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTg > 1:5117785/1‑150 (MQ=255) ttcagggcCACGGTAGCCGTGGCCCTGAAGCAAGCTTCCCGGGCAGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGAAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGa > 2:6337116/7‑150 (MQ=255) ttcaGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGa > 2:183000/4‑150 (MQ=255) ttcaGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGa > 1:575497/4‑150 (MQ=255) aTGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGa > 1:711543/1‑150 (MQ=255) gAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGAcc > 2:3623378/1‑150 (MQ=255) aGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGAccc < 1:4939687/150‑1 (MQ=255) gggcCACGGTAGCCGTGGCGCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGACCCg > 1:8497454/3‑150 (MQ=255) cgcCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGACCCGt < 1:3608809/150‑1 (MQ=255) gcCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGACCCGTg > 1:133665/1‑150 (MQ=255) gcCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGACCCGTg > 2:1502548/1‑150 (MQ=255) cACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGACCCGTGAc > 2:7985545/1‑150 (MQ=255) cACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGACCCGTGAc > 1:7947074/1‑150 (MQ=255) aCGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGACCCGTGACg < 1:8607820/150‑1 (MQ=255) tACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGACCCGTGACGGCCaa < 2:1046922/150‑1 (MQ=255) | AAATGGCCCGCGCGGAAATGGTCGGCCGTTACGGCAGCGACGCCTACACCGAAGGCTTCCGCGTCACGACCACCGTGCCTAGCGACATGCAGGAAATGGCCAACAAGGCCGTCCTCAAGGGCCTCTCCGATTACGATGAGCGCCACGGCTACCGTGGCCCTGAAGCACGCTTCCCGGGCCGCACCCAGGCAGCGTGGCTGCAGGAGCTGGGCAAGCAACGCACCCTTGGCGGCCTGGAGCCAGCCATTGTCACCCAGGTGGAACACACCGGCCTCAAGGTGCTGACCCGTGACGGCCAA > NC_002947/5811216‑5811514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |