| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,828,109 | A→T | 5.9% | S14C (AGC→TGC) | yggW → | coproporphyrinogen/heterocyclic compound oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,828,109 | 0 | A | T | 5.9% | 636.3 / 4.2 | 198 | S14C (AGC→TGC) | yggW | coproporphyrinogen/heterocyclic compound oxidase |
| Reads supporting (aligned to +/- strand): ref base A (31/152); new base T (10/2); total (44/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.07e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 219 total aligned reads displayed.
TGGGTACCGGAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTG > NC_002947/5827960‑5828258 | tGGGTACCGGAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTa < 2:5502056/150‑1 (MQ=255)tGGGTACCGGAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTa < 2:8505708/150‑1 (MQ=255)tGGGGACCGGAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGACATGCTGTCGCCCCCCGGCGCGGCAGGCTTTa < 2:2842087/150‑1 (MQ=255) gggTACCGGAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTag < 1:4440187/150‑1 (MQ=255) gggTACCGGAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTag < 1:4124656/150‑1 (MQ=255) gggTACCGGAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTag < 1:7783919/150‑1 (MQ=255) gTACCGGAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTagca < 1:7245601/150‑1 (MQ=255) cGGAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCt < 2:1836177/150‑1 (MQ=255) ggAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTg < 1:6385873/150‑1 (MQ=255) gAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGGCGGCGTTTGGAGccagg > 2:3199941/1‑147 (MQ=255) aGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGccgcgc < 2:2349275/150‑5 (MQ=255) aGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTgcc < 2:1536747/150‑1 (MQ=255) aGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTgcc < 2:6071798/150‑1 (MQ=255) cAACTGCTCCTGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTGCTAAAGCCTgccgcgc < 1:2713641/150‑3 (MQ=255) cTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTg < 2:3472174/150‑1 (MQ=255) tGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTgg < 1:5171167/150‑1 (MQ=255) tCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGGCGGCGGTTGTAGACGGCCGCCCCCGgcgc > 1:2312516/1‑150 (MQ=255) tCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCCGGCTTTATCAACCAGCCCCCCCCGgcgc > 1:7195564/1‑150 (MQ=255) tCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGgcgc < 1:259191/150‑1 (MQ=255) ccAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCt < 1:1843918/150‑1 (MQ=255) aGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGGCGGCGGTTTCAGCCAGCCCCCCCCGGCGCGGt > 1:6490456/1‑150 (MQ=255) aGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGt < 2:8608679/150‑1 (MQ=255) gcCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACa < 1:5991408/150‑1 (MQ=255) cGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATc < 1:4775983/150‑1 (MQ=255) cccAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCg < 1:3577180/150‑1 (MQ=255) agACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGc < 2:8214190/150‑1 (MQ=255) aCAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGGCGGGTTTTGGAGCCAGCCGCCGCGGGCGCGGTACAACAA‑CAGTACGTGGTGCGt > 2:6773248/1‑150 (MQ=255) cAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑a < 2:7228085/150‑1 (MQ=255) aaGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑Ac < 2:3436387/150‑1 (MQ=255) gAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGGGGGCGGTAGGCGCCGGCCGCCCCGGGCGCGGGACAACCA‑CAATCCCGGGTGCggaagc > 2:1600567/1‑145 (MQ=255) ccAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGGCGGCGTTTGCAGCCTGCCGCCGCGGGCGCGGTACATACA‑CAATGCGGTGTGCGT‑AAGCaaa > 2:2820207/1‑150 (MQ=255) ccAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCaaa < 2:6509383/150‑1 (MQ=255) cAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAAt < 1:1560165/150‑1 (MQ=255) cAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAAt < 1:1560251/150‑1 (MQ=255) gCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCGTTATCGGCCCGCCGCCGCGGGCGCGGTTCATACA‑CAATCACGGGTGCGG‑ACGCaaaatc > 2:4225066/1‑147 (MQ=255) cTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGcc < 1:4843827/150‑1 (MQ=255) cTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGcc < 1:3058882/150‑1 (MQ=255) ccACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTAt < 2:7602885/150‑1 (MQ=255) cACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCCGGCGTTTGCAGCCAGCCCCCCCGGGCGCGGTAAAAACA‑CAATACGGGGTGCGT‑ACCCCAAAGCCCATaat > 2:2130754/1‑148 (MQ=255) aCCGCGCCCGTTCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTg < 2:2350530/150‑1 (MQ=255) ccGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGGGGGCGGTGGCAGCCCGCCCCCGCGGGCGCGGGACAACCA‑CAATCCGGGGGGCGG‑ACGCCAAAGccccgaatgg > 2:3743746/1‑143 (MQ=255) gcgcCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCCGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGa < 1:3507084/150‑1 (MQ=255) cgcCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGAc < 1:7511164/150‑1 (MQ=255) cccGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACtt < 2:3592294/150‑1 (MQ=255) cccGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACtt < 2:3866681/150‑1 (MQ=255) cGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCATTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCa < 2:2039230/150‑1 (MQ=255) tGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAAc < 1:507081/150‑1 (MQ=255) gCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGGCGGGGTTAGCAGCCGGCCCCCGCGGGCGCGGTACAACCACCATACCG‑GGGGCGG‑GCGCAAATGCCCCTAATGCGACATCAAca > 2:6405060/1‑149 (MQ=255) cATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTcc < 1:1245681/150‑1 (MQ=255) tGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCa < 1:4213789/150‑1 (MQ=255) ggCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTccccc < 2:8703212/150‑3 (MQ=255) ggCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCAc < 2:4100157/150‑1 (MQ=255) ggCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCAc < 2:864002/150‑1 (MQ=255) ggCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCAc < 1:7615777/150‑1 (MQ=255) ggCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCAc < 1:6155350/150‑1 (MQ=255) ggCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCAc < 2:2683714/150‑1 (MQ=255) tgctgcGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCGTTAGAAGCCAGCCCCCGCAGGCGCGGTTCAAACA‑CAATACGGTGTGCGT‑AAGCACATTCCCGAATTTCGACATCAACACCCCCCCAGc > 2:7922718/1‑150 (MQ=255) gctgcGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGcc < 1:297054/150‑1 (MQ=255) cAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCt < 1:3191526/150‑1 (MQ=255) aaaCGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCGGGCGTTAGCAGCCTGCCCCCCCGGGCGCTGTACAACCA‑CAAACCCAGGTGCGT‑ACGCCAAAGCCCCGATTGCGACCTCAACGCCCCCCccgccgcggcgg > 2:6294083/1‑144 (MQ=255) aaCGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGa < 1:2650146/150‑1 (MQ=255) gTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTATCACCCAGCCCCCCCAGGCGCAGTAAAACCA‑CAATACGTGGTTCCTAACCCAAAT‑CCCATAATTCGACATCAAAAACCACCCCCCCGGGCCAGAAca > 2:5837225/1‑149 (MQ=255) gTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACt < 1:549905/150‑1 (MQ=255) tCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTa < 1:3977013/150‑1 (MQ=255) gCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGa < 1:7074608/150‑1 (MQ=255) gCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGa < 2:3507902/150‑1 (MQ=255) ccTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGaa < 1:7060413/150‑1 (MQ=255) tGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGa < 1:5642379/150‑1 (MQ=255) ggCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCATGCAGCCGGGCCTGAACTACCGGAAGAt < 1:2251738/150‑1 (MQ=255) cATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGc < 1:7811860/150‑1 (MQ=255) aTGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGcc < 1:5289051/150‑1 (MQ=255) aaTGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGAAGCCTGCCGCCGCTGGCGCTGTTCATCCG‑GATTCCGTGGTGCGT‑TCGCACATTCCCTTTTTGCGACTTCAACTCCCACGCTGCCGGGCCTGAACTACCGGAAGTTGCCTACGTcac < 2:3524013/150‑1 (MQ=255) aTGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTcaca < 1:2803660/150‑1 (MQ=255) gCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCGGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGc > 2:493151/1‑150 (MQ=255) tGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCCCGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGccc < 1:3327044/150‑1 (MQ=255) ttgCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTg < 2:4470565/148‑1 (MQ=255) ccccccGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTc < 2:5649042/150‑1 (MQ=255) cccGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTcgac < 2:3657956/150‑1 (MQ=255) cGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTcgacga < 2:7010150/150‑1 (MQ=255) cGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTcgacga < 1:8057779/150‑1 (MQ=255) gcgcGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGAcc < 2:106553/150‑1 (MQ=255) ggCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGa > 1:8604194/1‑150 (MQ=255) cAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGAcc > 2:7481030/1‑150 (MQ=255) cAGGCTTTAGCAGCCTGCCCCCGCTGGCGCTGTACATCCA‑CATTACGTGGTGCGT‑ACGCAAAAGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCAGCTCGACGACCTCGAcc > 2:6095727/1‑150 (MQ=255) aGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCa < 1:4661403/150‑1 (MQ=255) aGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCa > 2:5351683/1‑150 (MQ=255) aGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCa < 2:4584598/150‑1 (MQ=255) aGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCa > 1:5960893/1‑150 (MQ=255) gCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAgg > 1:402242/1‑150 (MQ=255) gCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAgg > 2:3837057/1‑150 (MQ=255) cTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGa < 1:4049364/150‑1 (MQ=255) cTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGa < 2:2678114/150‑1 (MQ=255) cTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGa > 2:754962/1‑150 (MQ=255) tttAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAg > 1:8291925/1‑150 (MQ=255) ttAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAgc < 2:4007682/150‑1 (MQ=255) tgagcagcCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAgc < 1:537084/148‑1 (MQ=255) tAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAgct > 1:6650128/1‑150 (MQ=255) tAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAgct < 1:1700757/150‑1 (MQ=255) agcagcCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAACTGCCCTTATTGCGACTTCAACTCCCACGCCGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAgctg < 2:3053451/150‑1 (MQ=255) agcagcCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAgctg > 1:6780918/1‑150 (MQ=255) | TGGGTACCGGAGCGCAACTGCTCCAGCGCCGATCTAGCCCCAGCAGACAAGAACCAGCTCAGCCACCGCGCCCGTGCCATGGCCCTGCTGCGCAAACGTCTGGGCCTGGCATGATCGAAATGCTGTCGCCCCCCGGCGCGGCAGGCTTTAGCAGCCTGCCGCCGCTGGCGCTGTACATCCA‑CATTCCGTGGTGCGT‑ACGCAAATGCCCTTATTGCGACTTCAACTCCCACGCAGCCGGGCCTGAACTACCGGAAGATGCCTACGTCACAGCCCTGCTCGACGACCTCGACCAGGAGCTG > NC_002947/5827960‑5828258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |