| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,847,431 | G→T | 5.3% | R332L (CGG→CTG) ‡ | calB → | coniferyl aldehyde dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,847,431 | 0 | G | T | 5.3% | 1291.2 / 40.6 | 379 | R332L (CGG→CTG) ‡ | calB | coniferyl aldehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (168/191); new base T (3/17); total (171/208) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.16e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 383 total aligned reads displayed.
CCGCCTGTACCCGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAGCGCCCACACCCATTGGCGC > NC_002947/5847282‑5847580 | gCCTGTACCCGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGgc < 1:3229579/150‑1 (MQ=255) ccTGTACCCGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGgcg < 1:5142973/150‑1 (MQ=255) cTGTACCCGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGgcgc < 1:766897/150‑1 (MQ=255) cTGTACCCGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGgcgc > 2:6367247/1‑150 (MQ=255) gTACCCGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCt < 1:5708968/150‑1 (MQ=255) gTACCCGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCt < 2:2133963/150‑1 (MQ=255) aCCCGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACGCAGGCGCCGGCCCTGAGGGGCTTCGCCTgg < 2:7310215/150‑2 (MQ=255) cccGCGTATTGCCGACAACCCCGACTCCACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGCCGGCCCTGAGGGGCTTCGCCTggg < 1:795695/150‑3 (MQ=255) cccGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGCCGGCCCTGAGGGGCTTCGCCTggg < 1:6440353/150‑3 (MQ=255) ccGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGcca > 2:771189/1‑150 (MQ=255) ccGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGcca > 1:168229/1‑150 (MQ=255) ttGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACAcc < 1:3464746/150‑1 (MQ=255) tGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACct < 2:6463280/150‑1 (MQ=255) aaCCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACctgc‑tgctg < 2:8306974/150‑1 (MQ=255) aaCCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACctgc‑tgctg < 1:6622312/150‑1 (MQ=255) aaCCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACctgc‑tgctg > 1:437225/1‑150 (MQ=255) aCCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCtgcatgctg < 1:8390649/150‑1 (MQ=255) ccccGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGa > 1:5965662/1‑150 (MQ=255) cccGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCAACACACCTGC‑TGCTGGAc < 2:2544001/150‑1 (MQ=255) cGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGt < 1:1484896/150‑1 (MQ=255) aCTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGa < 2:6888955/150‑1 (MQ=255) aCTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGAGGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGa < 2:1473034/150‑1 (MQ=255) tACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAAc < 2:7859734/150‑1 (MQ=255) acCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGAc > 2:4487852/1‑150 (MQ=255) acCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGAc > 1:5748022/1‑150 (MQ=255) acCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGAc > 1:6598467/1‑150 (MQ=255) atcatcAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATg < 2:3434605/150‑1 (MQ=255) tcatcaACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGc > 2:2402359/1‑150 (MQ=255) atcaACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAg > 1:5314767/1‑150 (MQ=255) caACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGt > 2:8751479/1‑150 (MQ=255) aaCCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTg > 2:1500020/1‑150 (MQ=255) aaCCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTg < 1:3744146/150‑1 (MQ=255) aaCCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTg < 1:1047552/150‑1 (MQ=255) aCCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGa < 2:936703/150‑1 (MQ=255) cccGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGAt > 1:8245128/1‑150 (MQ=255) gcgcCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCa > 1:3921645/1‑150 (MQ=255) gcgcCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCa < 2:363452/150‑1 (MQ=255) gcgcCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCa > 2:1117592/1‑150 (MQ=255) gCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAAt < 2:698052/150‑1 (MQ=255) aGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCt > 2:2236986/1‑150 (MQ=255) cTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCgg < 1:1893631/150‑1 (MQ=255) cTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCgg < 2:5289354/150‑1 (MQ=255) cTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCgg < 2:3119254/150‑1 (MQ=255) ttGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGc > 2:3293378/1‑150 (MQ=255) ttGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGc > 2:1949818/1‑150 (MQ=255) ttGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGc < 1:7046715/150‑1 (MQ=255) agcaCCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGc < 2:8588795/150‑1 (MQ=255) ccTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTAtt < 1:7342906/150‑1 (MQ=255) gctgGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGGCGGCGCCTGCCACCACACCTGC‑TGCTGTACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGcc < 2:642407/150‑1 (MQ=255) tgGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGt > 2:2712309/1‑150 (MQ=255) tgGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGt > 2:1788063/1‑150 (MQ=255) gACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCCGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCCCACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTa < 2:4276270/150‑1 (MQ=255) gACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTa < 1:7162259/150‑1 (MQ=255) gACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTa < 2:6025591/150‑1 (MQ=255) aCGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAg > 1:619034/1‑150 (MQ=255) cGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGt < 1:8736096/150‑1 (MQ=255) gATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTg > 2:4610047/1‑150 (MQ=255) gATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTg > 2:2376182/1‑150 (MQ=255) cTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCtt > 2:4773416/1‑150 (MQ=255) tCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTa > 2:516867/1‑150 (MQ=255) tCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTa > 1:2367471/1‑150 (MQ=255) tCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTa > 2:6334835/1‑150 (MQ=255) gcgcCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATg > 1:8072670/1‑150 (MQ=255) cgcCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGa < 2:4743977/150‑1 (MQ=255) gcCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGAc < 2:4698721/150‑1 (MQ=255) cAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACgg > 2:8082290/1‑150 (MQ=255) aaaGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGc > 1:477422/1‑150 (MQ=255) gcgcgcAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCg > 1:4062122/1‑150 (MQ=255) cgcAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATc < 1:4259639/150‑1 (MQ=255) gcAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCa < 1:7557987/150‑1 (MQ=255) gcAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCa < 2:5887206/150‑1 (MQ=255) gcAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCa > 2:4035468/1‑150 (MQ=255) gcAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCa < 2:3735697/150‑1 (MQ=255) gcAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCa < 2:437225/150‑1 (MQ=255) gcAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCa < 1:5821213/150‑1 (MQ=255) cAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAg < 1:846892/150‑1 (MQ=255) aaGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAgg < 2:6542106/150‑1 (MQ=255) gTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGcc > 1:3771995/1‑150 (MQ=255) aCTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCtt < 2:1271865/150‑1 (MQ=255) tCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGAt < 2:2978576/140‑1 (MQ=255) tCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTgg > 2:7393483/1‑150 (MQ=255) cGACTTGGACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACCCCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGc < 2:8690250/150‑1 (MQ=255) gACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGcc > 2:6632434/1‑150 (MQ=255) cTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTa < 1:2669080/150‑1 (MQ=255) ttGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTAc > 2:1198467/1‑150 (MQ=255) ccAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATc > 1:4996988/1‑130 (MQ=255) ccAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATc < 2:4996988/130‑1 (MQ=255) aGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCa > 2:8397444/1‑150 (MQ=255) gAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAgcgc > 1:3545647/1‑150 (MQ=255) gAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAgcgc > 1:997403/1‑150 (MQ=255) gAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAgcgc > 1:6766925/1‑150 (MQ=255) gAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAgcgc > 1:7625757/1‑150 (MQ=255) gCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAGCGCCca < 1:912065/150‑1 (MQ=255) ccccTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAGCGCCcac < 2:1634238/150‑1 (MQ=255) ctgaaGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAGCGCCCacac > 2:5687651/5‑150 (MQ=255) ccTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAGCGCCCacac > 1:293769/1‑150 (MQ=255) tCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAGCGCCCACAccc > 1:3619076/1‑150 (MQ=255) aGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAGCGCCCACACCCAt > 1:2429091/1‑150 (MQ=255) gCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAGCGCCCACACCCATTgg < 1:1203037/150‑1 (MQ=255) ggCGCCAGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAGCGCCCACACCCATTGgcgc > 2:74754/1‑150 (MQ=255) | CCGCCTGTACCCGCGTATTGCCGACAACCCCGACTACACCGCCATCATCAACCCGCGCCAGTTGCAGCGCTTGCAGCACCTGCTGGACGATGCTCGCGCCAAAGGCGCGCAAGTACTCGACTTGTACCCAGGCGAAGCCCCTCAGGGCCGGCGCCTGCCACCACACCTGC‑TGCTGGACGTGAACGACAGCATGCAGGTGATGCAGGACGAAATCTTCGGCCCGCTATTGCCGTTAGTGCCTTATGACGGCATCGATCAGGCCTTGGCCTACATCAACCAGCGCCCACACCCATTGGCGC > NC_002947/5847282‑5847580 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |