| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,863,891 | G→C | 8.1% | intergenic (+64/+74) | PP_5134 → / ← PP_5135 | hypothetical protein/ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,863,891 | 0 | G | C | 8.1% | 634.3 / 6.3 | 213 | intergenic (+64/+74) | PP_5134/PP_5135 | hypothetical protein/ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (139/49); new base C (15/6); total (155/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 213 total aligned reads displayed.
GCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTT > NC_002947/5863743‑5864038 | gCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGa > 2:6498037/1‑150 (MQ=255) gTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAt‑gt < 2:3384861/150‑1 (MQ=255) gTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAt‑gt < 2:128730/150‑1 (MQ=255) ccACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTc > 2:7754348/1‑150 (MQ=255) cccTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTccac < 1:695203/150‑1 (MQ=255) cccTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTccac < 1:4250145/150‑1 (MQ=255) ccTGAATCCCGTGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCGCCAAAGGGCGGCCGTTGTACAACCACCCAT‑GTGGGTccccc > 1:4968664/1‑150 (MQ=255) ccTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTccacc > 2:8814652/1‑150 (MQ=255) cTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTccacca < 2:1937352/150‑1 (MQ=255) cTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTccacca < 1:1100685/150‑1 (MQ=255) cTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAAACC‑CCTCCTACGGGCGGCCAGTGTAAAACAACCGAA‑GTGCGTcaaaca > 2:2555935/1‑145 (MQ=255) cTGAATCCAGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAAACC‑GCTCCTACGCGCCGCCGTTTTAAAACCACCGAT‑GTGCGTccacca > 2:4488063/1‑150 (MQ=255) tGAATCCCAGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTGAAACC‑CCGCCAACGGGCGGCCGTTGTAAAACCACCCAA‑GTGCGTccaccac > 1:5659690/1‑150 (MQ=255) ccGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAAACC‑GCGCCTACCGGCGGCCGTTGTTAAACAACCGAA‑GTGCGTCCACCACCAATcc > 1:553587/1‑150 (MQ=255) cGGGGCCTAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGTGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCg < 2:839513/150‑1 (MQ=255) cGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCg < 1:649945/150‑1 (MQ=255) cGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCg > 2:6478861/1‑150 (MQ=255) cGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCg < 1:5043975/150‑1 (MQ=255) gggCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGc > 1:76752‑M2/1‑149 (MQ=255) gggCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGc > 2:4234409‑M2/1‑149 (MQ=255) gggCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGc > 1:2508611‑M2/1‑149 (MQ=255) ggCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCAAAGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcg < 2:8355158‑M2/150‑3 (MQ=255) ccAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgta > 1:2370642‑M2/1‑146 (MQ=255) ccAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgta > 1:2521924‑M2/1‑146 (MQ=255) ccAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgta > 1:6813375‑M2/1‑146 (MQ=255) aaGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtagg > 2:3634973‑M2/1‑144 (MQ=255) aaGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACCGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtagg < 2:5776676‑M2/150‑7 (MQ=255) aGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtagga > 2:322867‑M2/1‑143 (MQ=255) aGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtagga > 1:4810235‑M2/1‑143 (MQ=255) gCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcggaggag < 2:5615343‑M2/150‑9 (MQ=255) aaTCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcggg > 1:2122375‑M2/1‑138 (MQ=255) aaTCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcggg > 1:770833‑M2/1‑138 (MQ=255) aaTCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcggg > 1:3438438‑M2/1‑138 (MQ=255) aTCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcgggt > 1:716606‑M2/1‑137 (MQ=255) aTCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcgggt > 1:6370804‑M2/1‑137 (MQ=255) tCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAAACC‑GCTCCAACCGGCGGGCGGTGTTAAACCACCCCT‑GTGGGTCCCCCACCCAAACCGCGGGGGAGCCGGtt > 2:785661/1‑150 (MQ=255) cAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcgggttt > 1:6263898‑M2/1‑135 (MQ=255) ggCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcgggtttac > 2:7046673‑M2/1‑133 (MQ=255) gCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcgggtttacc > 1:8197231‑M2/1‑132 (MQ=255) gCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcgggtttacc > 2:4048533‑M2/1‑132 (MQ=255) tGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcgggtttaaccg < 2:5782854‑M2/150‑21 (MQ=255) gAGCGGCAGGTGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACAACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcgggtttacccgc > 1:6873614‑M2/1‑129 (MQ=255) gCGGCTGGAGCTGTTGGAGGCGCTGGTTTCAGAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgttggtgcgggtttacccgcga > 2:1824496‑M2/1‑127 (MQ=255) gCAGGAGCCGTTGGTGGCGCTGGTTTCACAGATTTGCGCCAGCAGGGTGGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCTAT‑GTGCGTCCACCACCAATCCGGcttaggagcggttttacccgcgaaga > 2:4503978‑M2/1‑124 (MQ=255) gCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAAACC‑CCTACTACGGGCGGCCTTTGTAAAAACACCCAA‑GTGAGTCCACCACCAAAACCGcgtaggagcgggtttaaccgcgaaga < 2:6185374‑M2/150‑27 (MQ=255) cAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtag < 1:5083729‑M2/122‑6 (MQ=255) cAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑CCACCAACGGGCGGCCATTGTACAACCACCGAT‑GTGCGTCCACCACCAAACCGGCGTAGGAGCGGGTTTA‑ACCGCGAAGAGGCCGAc > 2:3369115/1‑150 (MQ=38) ttGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑CCTCCAACGGGCGGCCGTTGTACAACCACCCAT‑GTGCGTCCACCACCCAACCGGCGGAGGAGCGGGTTTA‑CCCGCCAAGAGGCCGACCCt > 2:6405658/1‑150 (MQ=38) ttGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACAC‑GCTCCTAAGGGCGGCCTTTGTACAACCACCCAT‑CTGCGGCCACCACCAATACGGcctaggagccggtttaccccccaagaggcccaccct < 2:4663788‑M2/150‑37 (MQ=255) tGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTccac < 2:2117340/93‑1 (MQ=255) acaGATTTGAGCCAGCAGGGTTGGCCTGTTGGCGGGTTAAACC‑GCTCCTAAGGGGGGGCGTTTTAGAACCAACGAT‑GTTGGTCCACCAACAAAACGGGGTTGGTTCGGGTTTT‑AGCGCGAAGATGGCGACCCTGGAATAGTGATTCGttt > 2:2228739/1‑149 (MQ=255) acaGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑CCTCCAACGGGCGGCCGTTTGACAACCACCCAT‑GTGCGTCCCCCACCCAACCCGCGTAGGAGCGGGTTTA‑ACCGCGCAGAGGCCGACCCAGCAATAGTGAAGCGTTa > 2:3820348/1‑150 (MQ=37) caGATTTGAGCCAGCAGGGTTGGCCTCTTCGCCGGTAAACCC‑CCTCCGACGGGCGGGCGTTTTAAAACCACCCAG‑GTGCGGCCACCACCAAAACCGCGGGGGGGCGGGGTTA‑ACCGCGAAGAGGCCCACCCCGCAAACGTGAAGCGGTaa > 2:8091353/1‑149 (MQ=255) aGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAAACC‑GCTCCTACCGGCGGGCGTTGTACAACCCCCGAT‑GTGCGTCCACCACCAAACCCGCCTACGAGCGGGGTTA‑ACCCCGAAGAGGCCGACCCAGCAATAGTGAAGCGTTAct > 2:5544906/1‑150 (MQ=255) tgctgtgCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTActgc > 2:8722677/7‑150 (MQ=255) tGAGCCTGTTGGGTTGGCCTCTTGGGGGTTAAACCC‑GCACCTCCGGGCGGACTTTTTACACCCACCGTT‑GTGCTTCCACAAAAAATCGGGGTTTGGTGCGTTTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTgg < 2:5095436/150‑1 (MQ=255) ctggtggTTGGGCTTTTTGGGGTTAAACCCGGCTCCT‑CGGGGGGCCGTTGGAAAACCCCCGGTGGTGCGCCCACCACCACGCGGGGTTCGGGGGGGTTTTC‑CCCGCGAAGCGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCAc < 2:4851929/145‑1 (MQ=255) ggTTGGCCTCTTCGCGGGTAAAACC‑CCTCCAAAGGGCGGCCTTTGTACAACCACCCAT‑GTGCGTCCACCCCCAAACCGGCGGAGGAGCGGGTTTA‑ACCCCGAAGAGGCCCACCCAGCAATAGTGAAGCGTTACTGCTGGGCCACCGtctc > 2:4628500/1‑150 (MQ=255) ggCCTCTTCGCGGGTAAACCC‑CCGACAACGGGCGGCCGTTGTAAAACCACCCAA‑GTGCGGCCCCCACCAAACCGGCGGTGGAGCGGGTTTA‑ACCGCGAAGAGGCCGACCCAGCAATAGTGAAGCGTTACTGCGGGGCCACCATCACCGAc > 2:26362/1‑150 (MQ=255) ctctTCGCGGGTAAACCC‑CCTCCAACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCCGCGGAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAAAAGTGAAGCGTTACTGCAGGGCCACCATCTCCGACTTg > 1:2843076/1‑150 (MQ=25) ttCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCg > 2:2849343/1‑150 (MQ=255) gttaaacccc‑GCTCATGGGGGGGCCTTTTTTACACCCCCCGTT‑GTGCGCCCACCACCAA‑GCGGGGTTGGGTGGTTTTTACCCCGGTACGGGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATa < 2:8148445/143‑1 (MQ=255) ggTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGcc > 1:1428693/1‑143 (MQ=255) ggTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGcc < 2:1428693/143‑1 (MQ=255) ggTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAg > 1:4113366/1‑150 (MQ=255) gTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcgggtttacccgcgaagaggccgaccctgctggctcaaatctgtgaaaccagcgcctccaactgctcctgccgctcagcc < 2:8678642‑M2/150‑89 (MQ=255) cccc‑GCCCCTCCGGGCGCCCTTTTCACACCCACGGTT‑GTGCGCCCCCCCCAACGCGGGCTTTGGTGGGGTTTTC‑CCCGCTATGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCtt < 2:2749551/149‑1 (MQ=255) ccc‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTg > 1:6112152/1‑150 (MQ=255) ccc‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTg > 2:6028673/1‑150 (MQ=255) cc‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGcgtaggagcgggtttacccgcgaagaggccgaccctgctggctcaaatctgtgaaaccagcgcctccaactgctcctgccgctcagcctgattc < 2:1141737‑M2/150‑95 (MQ=255) cc‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTgc > 1:4197850/1‑150 (MQ=255) cc‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTgc > 2:5287693/1‑150 (MQ=255) cc‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTgc > 2:6131472/1‑150 (MQ=255) c‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTgcg > 2:454909/1‑150 (MQ=255) ccccgccGGGGGGCCTTTTTACAACCCCCTCT‑GTGCGCCCACCCCCACGCCGGCTTTGGTGGGTGTTTC‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGcc < 2:4218226/144‑1 (MQ=255) tCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCa > 2:4022366/1‑150 (MQ=255) naCGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATa > 1:1953552/2‑91 (MQ=255) cGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCgg > 2:3514774/1‑150 (MQ=255) ggggggCCTTTGAACAACCACGGTT‑GGGCGCCCACCACCACTCCGGCTTTGGTGGGGGTTTA‑CCCGCTAAGTGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGc < 2:666729/150‑1 (MQ=255) gggCGGCCTTTGTACACCCCCCGAG‑GGGCGCCCACCACCACGCGGGCGTCGGCGCGGGTTTA‑CCCGCGAAGCGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGc < 2:7255466/150‑1 (MQ=255) gggCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCAtt < 2:5419799/146‑1 (MQ=255) gggCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCAtt > 1:5419799/1‑146 (MQ=255) ggcggcATTTGAACAACCACCGTT‑GGGCGACCCCCACCAATCCGGCGTCGGTGGGGGTTTC‑CCCGCTATGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGcc < 2:4989567/150‑1 (MQ=255) gcCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGaa > 2:7391841/1‑150 (MQ=255) cTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATc > 1:3978304/1‑150 (MQ=255) tcaaCAACCACCGTG‑GTGCTACAACCACAAAACCGGGTGAGGTGCGTGTTAA‑CCCGCTAAGAGCCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTgg < 2:7641904/147‑1 (MQ=255) cAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCAc > 2:5840582/1‑150 (MQ=255) aaCCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACg > 2:1787289/1‑150 (MQ=255) aaCCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACg > 1:7998975/1‑150 (MQ=255) aaCCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACg > 2:8486138/1‑150 (MQ=255) aaCCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACg > 2:2467044/1‑150 (MQ=255) aaCCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACg > 1:1944829/1‑150 (MQ=255) aaCCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCAGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACg > 1:4712925/1‑150 (MQ=255) accaccGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACgg > 1:5376705/1‑150 (MQ=255) ccaccGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGt > 1:8654555/1‑150 (MQ=255) caccGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGtt > 2:1559766/1‑150 (MQ=255) caccGAT‑GTGCGACCACCACCAACCCGGCTTAGGAGCGGGTTAA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGtt < 2:8599951/150‑1 (MQ=255) accGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGttt > 2:7360587/1‑150 (MQ=255) accGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGttt > 2:5065817/1‑150 (MQ=255) accGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGttt > 1:8492338/1‑150 (MQ=255) | GCAGTGGTCCACCCTGAATCCCGGGGCCAAGCTGAATCAGGCTGAGCGGCAGGAGCAGTTGGAGGCGCTGGTTTCACAGATTTGAGCCAGCAGGGTTGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGGCGGCCTTTGTACAACCACCGAT‑GTGCGTCCACCACCAATCCGGCGTAGGAGCGGGTTTA‑CCCGCGAAGAGGCCGACCCTGCAATAGTGAAGCGTTACTGCTGGGCCACCTTCTCCGACTTGCCGTCATAGCGCTTGCGCCATTCGGCCAGAATCTGGTCACGGTTTT > NC_002947/5863743‑5864038 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |