| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,882,009 | T→A | 6.2% | intergenic (+26/+79) | rpiA → / ← PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,882,009 | 0 | T | A | 6.2% | 1056.1 / 10.0 | 350 | intergenic (+26/+79) | rpiA/PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (140/178); new base A (18/10); total (160/190) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.77e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 373 total aligned reads displayed.
GGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCAT > NC_002947/5881860‑5882158 | ggAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCT < 1:2723752‑M1/150‑1 (MQ=255) gCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACA < 2:268250‑M1/150‑1 (MQ=255) tGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgg < 2:7855061‑M1/150‑3 (MQ=255) ggAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAgg > 2:5950060/1‑150 (MQ=255) gAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCGCCTACAAGGt > 2:6748201/1‑150 (MQ=255) taGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTATACCCGCTCCTACAAGGTa < 2:1865008/149‑1 (MQ=255) gcAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTAcccc > 2:2089523/1‑150 (MQ=255) cAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGc < 1:7608259/150‑1 (MQ=255) aCGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑t < 1:6522145/150‑1 (MQ=255) aCGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑t < 1:6189061/150‑1 (MQ=255) aCGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑t < 2:2795134/150‑1 (MQ=255) cGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGATGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑Tg > 1:8753335/1‑150 (MQ=255) cgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTgg < 1:710972/150‑1 (MQ=255) cgGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTgg < 1:4577988/150‑1 (MQ=255) ggCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGc < 2:2990265/150‑1 (MQ=255) ccAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgta > 2:561478‑M2/1‑146 (MQ=255) ccAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgta > 2:6944581‑M2/1‑146 (MQ=255) ccAACGGCCTGGTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACACGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgta > 2:5999155‑M2/1‑146 (MQ=255) cAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtag > 1:3450961‑M2/1‑145 (MQ=255) ggCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagc > 1:7303299‑M2/1‑141 (MQ=255) gCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcg < 2:3865931‑M1/150‑45 (MQ=255) ccTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgg < 2:3079402‑M1/150‑46 (MQ=255) ccTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgg > 2:4088879‑M2/1‑139 (MQ=255) ccTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgg > 2:1667385‑M2/1‑139 (MQ=255) ccTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCGCTCCTACAACGTACCCCACCGGCC‑AGGAACCCTGGCGATCCCagtaggagcgg < 2:5967639‑M2/150‑12 (MQ=255) cTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcggg < 2:5169028‑M1/150‑47 (MQ=255) cTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcggg < 2:4834285‑M1/150‑47 (MQ=255) cTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcggg < 2:7424862‑M1/150‑47 (MQ=255) cTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcggg > 2:3873732‑M2/1‑138 (MQ=255) cTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcggg > 2:7241386‑M2/1‑138 (MQ=255) tGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgggt > 1:8254155‑M2/1‑137 (MQ=255) tGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACACGCGCCAACAAAGTAACCCAACGGCCAGGGAAACG‑GGCGATCCCGGAAGGGGCgggg > 2:147309/1‑149 (MQ=255) gTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgggtt > 2:6095654‑M2/1‑136 (MQ=255) gTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgta > 2:6486355‑M2/1‑136 (MQ=255) gcggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGGGAACCCCCGCCAACAAGGTACCCCCCCCGCC‑GGGGACCCGGGCGATCCCcgtgggagcggggttacc < 1:6399728‑M2/150‑19 (MQ=255) cggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgggtttaccc > 2:2186723‑M2/1‑131 (MQ=255) cggcgcggcCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgggtttaccc > 1:3824502‑M2/1‑131 (MQ=255) gccggcGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAACCCCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACa > 1:3279813/1‑150 (MQ=255) tgctgctgctgGGCACCGCTGACGGCGTGAAGAGCCTGAAGGCCGATTAAACCCCTTCGCGGGTAAACCCGCACCTACACGGTACCCCACGGGCC‑TGGAACGGTGGCGATCCCTGTCGGAGGGGTTTTACCCGCGAACAGGCCCTGACAg < 1:5194513/150‑1 (MQ=255) tgctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAg > 2:2609721/1‑150 (MQ=255) cggctgctgGGCACCGCTGACGGCTTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGGGGGTAAACCCGCTCCTACACGGTACCCCACGGGCC‑TGTAACCGTGGCGATCCCTGTTGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGc < 1:182363/148‑1 (MQ=255) tgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGc > 2:1245360/1‑91 (MQ=255) gctggtgGGCACCGCTGATGGGGTTAAGAGCCTGATGGCCGATTAAAACCCTTCGGGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGACCGGTGGCGATCCCTGTTGGAGGGGGTTTACCCGCGAACAGGCCCTGACAGGCGa < 1:7449047/150‑1 (MQ=255) gtgctgGGCACCGCTTATGGCGTTAAGCGCCTGAAGGCCGATAAAAACCCTCCGGGGTTAAACCCGCTCCTAAACGTTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTTGGCGGGGTTTTACCCGCGAACAGGCCCTGACAGGCGAt < 1:3111098/149‑1 (MQ=255) ctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAt < 2:3563784/150‑1 (MQ=255) ggtgGGCACCGCTGACGGCGTTAAGCGCCTGACGGCCGTGTAAACCCCTTCGGGGTAAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGTAACCGTGGCGATCCCTGTAGGCGGGGTTTTACCCGCGAACAGGCCCTGACAGGCGAtca < 1:1123264/148‑1 (MQ=255) tgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagt < 2:3770947/150‑1 (MQ=255) ggCACCGCTGACGGCTTGAAGCGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAACCCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACGGTGGCGACCCCGGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 1:5546941/150‑1 (MQ=38) ggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGTGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 1:591689/150‑1 (MQ=255) ggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 1:7188086/150‑1 (MQ=255) ggCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGAtcagtca < 1:5760586/150‑1 (MQ=255) gCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCGCCTAAAAGGTACCCCCCCGGCC‑GGGGACCGGGGCGATCCCGGGTGGAGCCGGTTTACCCGCCAACAGGCCCTGACCGGCGAtcagtcag > 2:2406149/1‑150 (MQ=255) cGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCAGACAGGCGATCCGTCAGTCgg > 2:6571635/1‑150 (MQ=255) cTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGACCCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgct < 1:1253141/150‑1 (MQ=255) aaGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGgctgct < 2:6868703/150‑1 (MQ=255) cGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa < 1:2089523/150‑1 (MQ=255) cGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCA‑TGGAACCGTGGCTATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGaa < 1:1964743/150‑1 (MQ=255) gTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGc < 1:4475050/81‑1 (MQ=255) gagCCTGATGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCACCTACAAGTTACCCCACCGGCC‑TGTAACGGTGGCGATCCCTGTAGGTGGGGTTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATa < 1:7758945/150‑1 (MQ=255) agCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAg < 2:4597568/150‑1 (MQ=255) aaGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAgg < 2:4973056/150‑1 (MQ=255) ggCCGAGTAAAACCCTTCGCGGGTTAACCCGCTCCAACAAGGTACCCCACCGGCC‑GGGAGACGTGGGGATGCCGGTAGGAGCGGGTTTACCCGCGAACAGGCCCAGACAGGCCCTCAGTCAGTCGGCGGCGTGAACACATAGAACAGGtt > 2:4177897/1‑150 (MQ=255) gAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGc < 2:3452240/150‑1 (MQ=255) aGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCt < 1:4214536/150‑1 (MQ=255) aaaaCCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCAc < 2:622803/150‑1 (MQ=255) aaaaCCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCAc < 2:5674159/150‑1 (MQ=255) cccTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGAc < 1:3079007/150‑1 (MQ=255) ccTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACAAAGAACAGGTTCGGCTCACTGAcc > 2:8779127/1‑150 (MQ=255) cTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCa < 1:4929189/150‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgg < 1:4039326‑M2/69‑12 (MQ=255) gcgGGTAACCCCGCTCCTACAgggatcgccacggttccaggcggggggggtaccttgttggagggggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgc < 2:580631‑M1/150‑130 (MQ=255) gggTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccg > 2:6131255‑M1/1‑19 (MQ=255) gggTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTaaa > 1:8052697/1‑150 (MQ=255) gggTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTaaa < 1:7874814/150‑1 (MQ=255) ggTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgc > 1:3587013‑M1/1‑18 (MQ=255) gTAAACCCGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcg > 2:1303524‑M1/1‑17 (MQ=255) gTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATg < 2:545418/150‑1 (MQ=255) gTAAACCCGCACCTACCgggatcgccagggtccctggccggtggggtaccttgttggagcggttttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcg < 2:1065162‑M1/150‑134 (MQ=255) aCCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTcc < 2:116001/150‑1 (MQ=255) cccGCTCCTACAgggatcgccacggttccaggccggtggggtatcttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacag > 2:3726847‑M1/1‑12 (MQ=255) cccGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacag > 2:5651466‑M1/1‑12 (MQ=255) cccGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacag < 1:3902044‑M2/150‑105 (MQ=255) ccGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacagg > 1:4338332‑M1/1‑11 (MQ=255) ccGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaa > 2:4039326‑M1/1‑11 (MQ=255) ccGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacagg < 2:5062959‑M2/150‑106 (MQ=255) ccGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTcccc > 2:4440153/1‑150 (MQ=255) cGCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggc < 2:4554304‑M1/150‑141 (MQ=255) cGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCg > 2:1228556/1‑150 (MQ=255) cGCCCCTACTgggatcgccacggttccaggccggtggggtaccttttaggagcggttttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggc < 2:2529466‑M1/150‑141 (MQ=255) gCTCCTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcggagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggcc > 1:8524719‑M1/1‑9 (MQ=255) cTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccg < 2:8319173‑M2/150‑109 (MQ=255) tCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgt < 1:6259984‑M2/150‑110 (MQ=255) ccTACCgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgtt < 2:7673499‑M1/150‑145 (MQ=255) cTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttg > 2:4354149‑M1/1‑5 (MQ=255) cTACAgggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttg > 2:1565748‑M1/1‑5 (MQ=255) cTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTca > 2:7140297/1‑150 (MQ=255) tACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCtgtaggagcgggtttacccgcgaagggttttactcggccttcaggctcttcacgccttcagcggtgcccagcagcagcagatccgccggccgcgccgcgaacaggccgttgg < 1:1981‑M2/150‑113 (MQ=255) tACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTcat > 1:6619997/1‑150 (MQ=255) tACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTcat > 2:8451332/1‑150 (MQ=255) tACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGGAAATGGTCCCCGCTTcat > 1:2190587/1‑150 (MQ=255) | GGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAAGGTACCCCACCGGCC‑TGGAACCGTGGCGATCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCAT > NC_002947/5881860‑5882158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |