| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,908,169 | G→T | 10.8% | intergenic (‑128/‑140) | PP_5175 ← / → PP_5176 | HlyD family secretion protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,908,169 | 0 | G | T | 10.8% | 669.3 / 62.5 | 247 | intergenic (‑128/‑140) | PP_5175/PP_5176 | HlyD family secretion protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (79/140); new base T (15/12); total (95/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.95e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.12e-01 | |||||||||||
Only 100 of 254 total aligned reads displayed.
GACAGCGGACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGAATGCCACCGA > NC_002947/5908019‑5908318 | cAGCGGACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGTTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGa < 1:7862253/150‑1 (MQ=255) cAGCGGACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGa < 2:3418971/150‑1 (MQ=255) gCGGACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGc < 2:8190308/150‑1 (MQ=255) ggACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGccc < 2:650347/150‑1 (MQ=255) aCGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCcgc < 1:572290/150‑1 (MQ=255) gCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCTCGCCCGCGa < 1:4128001/150‑1 (MQ=255) cATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCTCGCCCGCGaa < 2:5168642/150‑1 (MQ=255) cATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCTCGCCCGCGaa < 1:5880946/150‑1 (MQ=255) cATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCTCGCCCGCGaa < 1:831920/150‑1 (MQ=255) cATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCTCGCCCGCGaa < 1:4523070/150‑1 (MQ=255) cATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGaa < 2:8355811/150‑1 (MQ=255) cATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGGTCGAGACACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGaa < 2:7579825/150‑1 (MQ=255) aTCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCGGGGCGCGGGCGGGccccccccc > 1:3181744/1‑144 (MQ=255) aTCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCGCGTCGCGGGGGGGGCCCCGAag > 1:6148815/1‑150 (MQ=255) aTCAACGCCATGCTGGCTCCTTGCGTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCCCGGGCGAGCCCCCGacg > 2:4025472/1‑148 (MQ=255) tCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGGGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAaga < 2:3532315/150‑1 (MQ=255) tCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAaga < 2:3443565/150‑1 (MQ=255) tCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCGCGTCGCGGGCGCGCCcgcccaga > 1:3810915/1‑145 (MQ=255) cAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCTCGCCCGCGAagag < 1:3920774/150‑1 (MQ=255) cAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAagag < 1:6918207/150‑1 (MQ=255) tGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCGTGGCGGGCGAGCCCCCGAAAACGCCTCcacaac > 1:5480617/1‑148 (MQ=255) ggCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCTTAGTTCAGGTTTCGATAAACATCACTGACGGGGGCCATGCTGGAATTTTTGTTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGcc < 1:7226446/150‑1 (MQ=255) ggCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATGTTTGGTGCCTGCGGGGGCCTATTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGcc > 2:6770485/1‑150 (MQ=255) gCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGC‑GGCGAGCCCGCGAAGAGGCCTCCACAGCCAt < 2:730966/150‑1 (MQ=255) ttgcttgTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCACTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTAt > 2:7412975/1‑150 (MQ=255) gcttgTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCTCGCCCGCGAag > 2:7681370/1‑128 (MQ=255) gCACAACTGATGTGTGGGATGCGACTGTGAGCGTAGTTCTGGGTTCGATAAACATCACTGCCGGGGGCCTTGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGCGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCt < 2:776998/150‑1 (MQ=255) acaAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGc < 2:5685085/150‑1 (MQ=255) aaaTGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCa < 2:8426782/150‑1 (MQ=255) aaaTGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCGCTTAGCGGGCGAGCCCGCGCAGAGGCCGCCACACCCAATTATAAGTATATGCCa > 1:2129037/1‑150 (MQ=255) gATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCGTTTTTGGTGCCTGCGGGGGCCACATCGCGGGCGAGCCCCCCAAGAGGCCTACACACCCACGTAAAAGTATCATCCAAATc > 2:6302739/1‑150 (MQ=255) aTTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATcc < 2:6915694/150‑1 (MQ=255) ttggtgGGTTGCCACTGTGAGCTTAGTTCTGGGTTCGATAACCATCAGTGAGGGGGGCCTTGCTGGCATTTTGGGGGCGGGGGGGGGCCTGTGGGCGGGCGCGCCCGGGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCa < 1:7601399/147‑1 (MQ=255) tgtgGGTTGCGACTGTGAGCGTTGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGa < 1:1360060/150‑1 (MQ=255) gtgGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCTTGCTGGAATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGaa < 1:6362490/150‑1 (MQ=255) tgtgAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGATCCCGCGAAGAGGCCTCCAAACCCCAGTATCAGTATCAGCCCAATCCAGAAACCATCAGGCAt > 2:7820301/1‑150 (MQ=255) gAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCgg < 1:8014247/150‑1 (MQ=255) aGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCGTCTTGGGGGGCGGGCCCGCGAAGAGGGCTCCACAGCCAATTATAAGTATATTGCATATGAAGTAAACATGAGGCATAGG‑c > 2:2622321/1‑150 (MQ=255) aGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCGCTTAGCGGGCGGGCCCGCCCAGAGGCCTCCACACCCAAGTGTAAGGATCTTCCAAATCCACAAAACAAAAGGccaccgc > 2:743133/1‑144 (MQ=255) ttCTGGGTTCGATAAACATCACTGACGGGGGCCATGCGGGCATTTGTGGGGCGTGCGGGGGCCTCTTCGCGGGCGCGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATcccc < 1:4585494/150‑1 (MQ=255) ttCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCGCGTCGCGGGCGGGCCCCCGAAGCGGCCGCCACAGCCAGGTAGAAGTATAAGCCCAATACACAAACCAACACGCCTCCG‑CCCAcccc > 2:1002868/1‑150 (MQ=255) aGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGtt < 2:2744816/150‑1 (MQ=255) aGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCACTTAGCCGGCGAGCCCCCCGACAAGCCAACAAACCCAAGGATCAGTATAAGCCCAAAACACAAAACAAAAGGCAACGG‑CCAAcccccgt > 2:2375743/1‑147 (MQ=255) ggtttCTATAAACATCACTGAGGGGGGCCTTGCTGGAATTTTTGGGGCCTGGGGGGGCCTCTTCGCGGGCGCGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTc < 1:5288331/147‑1 (MQ=255) ttCGATAAACATCACTGACGGGGGCCATGCTGGCTTTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCaa < 2:215566/150‑1 (MQ=255) ttCGATAAACAGCACTGACGGGGGCCATGCTGGCATTTTTGGGGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCaa < 2:1728649/150‑1 (MQ=255) aaCATCACTGCGGGGGGCCATGCTGGCTTTTTTGGTGCGTGGGGGGGCCTCTTCGCGGGCGAGCCCGCTAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTAc < 1:1002868/150‑1 (MQ=255) tCACTGACGGGGGCCTTGGTGGCATTTTTGGGGCCTGGGGGGGCCTCTTCGGGGGCGAGCCCGGGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCttt < 1:366461/150‑1 (MQ=255) tCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCttt < 1:4914346/150‑1 (MQ=255) tCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCttt < 2:4555609/150‑1 (MQ=255) aCTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTca < 1:6862117/150‑1 (MQ=255) aCTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCGCTTCGCGGGCGGGCCCCCGCAGAGGCCTCCCCACCCCAGTATAAATATATGCCATAAACACAAAACAAAAGGCAACGGCCCAACCCCG‑TCCAACCCCAACCattaa > 1:8805986/1‑148 (MQ=255) tGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCCTCCCCGGTCCAACCGCTACCTTTcaca > 2:5861078/1‑150 (MQ=255) gACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGCGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAg < 1:388400/150‑1 (MQ=255) cggggggCCTTGCTGGATTTTTTGGTGCCTGGGGGGGCCTCTTGGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAgg < 1:7364106/148‑1 (MQ=255) ggggCCATGCTGGCATTTTGGGGGCCTGGGGGGGCCTCTCCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAg < 1:2642395/150‑1 (MQ=255) gggCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAgg < 1:4768079/150‑1 (MQ=255) gCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCt < 2:6710008/150‑1 (MQ=255) gCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCt < 2:6564837/150‑1 (MQ=255) aTGCTGGCATTTTTGGTGCCTGCGGGGGCCTCGTCCCGGGGGAGCCCCCGCAGAGGCCGCCACAGCCCAGTTTCACTATCTGCCAAATAAAGAAACCAACAAGCATCCG‑CCAACCCCCGTACAAACGCAACCGTTAAAAAGGCGGCTcac > 2:3171413/1‑150 (MQ=255) tGGCATTTTTGGTGCCTGCGGGGGCCTCTTGGCCGGCGAGCCCCCGAAGAGGCCGCCACAGCCCAGTATAAGTAAATTCCAAAAACAGAAAACAACAGGCATAGG‑CCAACCCCCGTGCAACCCCAACCATTAACAGGGGGGCTcacaata > 2:8149841/1‑147 (MQ=255) tGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCCCGCAGAGGCCTCCACAGCCAAGTATCAGTATCTGCCAAATCCAGAAACCAACAGGCCACGG‑CCCACCCCCGTCCAACCGCTACCATTCACAGGGAGGCGCACAGTc > 2:7253038/1‑150 (MQ=255) gaaTTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCaa < 2:6738976/148‑1 (MQ=255) gCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCaa < 1:4262660/150‑1 (MQ=255) gCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCaa < 1:8511166/150‑1 (MQ=255) gCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCaa < 2:3551285/150‑1 (MQ=255) cATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAg < 2:225664/150‑1 (MQ=255) cATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAg < 1:780951/150‑1 (MQ=255) ttttGGGGCCTGCGGGGGCCTCTGCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGaa < 2:478057/150‑1 (MQ=255) ggTGCCTGGGGGGGCCTGTTCGGGGGCGCGCCCGCTAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATc < 1:3258544/150‑1 (MQ=255) gTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCa < 2:8647455/150‑1 (MQ=255) atggcTGTGGAGGCCTCTTCGCGGGCTCGCCCGCGAAGAGGCCCCCGCAGGCATGTATCAGTATCTTCCATATCCAGAAACCAACAGGCATCGG‑CCATCCCCCTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAATGAAGATCa > 1:7997504/5‑150 (MQ=25) tGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCaa < 2:5619788/150‑1 (MQ=255) ccTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCaaaa < 2:638237/150‑1 (MQ=255) cTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAAt < 2:6674716/150‑1 (MQ=255) ggggggCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACTATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGcc < 1:7552133/149‑1 (MQ=255) gCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAg < 1:1405886/150‑1 (MQ=255) gCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAg > 2:8581807/1‑150 (MQ=255) gCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAg > 2:7002505/1‑150 (MQ=255) ccTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTGTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGc > 2:4869517/1‑150 (MQ=255) ctctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGcc < 2:6711836/150‑1 (MQ=255) tctTCGCGGGCTCGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg > 2:7833095/1‑150 (MQ=255) tctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg > 1:4824664/1‑150 (MQ=255) tctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg > 2:801372/1‑150 (MQ=255) tctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg > 2:1542596/1‑150 (MQ=255) tctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg > 2:3767714/1‑150 (MQ=255) tctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg > 2:5959633/1‑150 (MQ=255) tctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg > 2:2332253/1‑150 (MQ=255) tctTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCg > 2:2645295/1‑150 (MQ=255) ctTCGCGGGCTCGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATTCCGTTAGCCGa > 2:5179735/1‑150 (MQ=255) ttCGCGGGCTCGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCATAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGaa > 2:1868484/1‑150 (MQ=255) ttCGCGGGCTCGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGaa > 2:7045799/1‑150 (MQ=255) ttCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGaa > 2:199093/1‑150 (MQ=255) ttCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGaa > 2:3602894/1‑150 (MQ=255) ttCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGGTAGCCGaa > 2:1277771/1‑150 (MQ=255) gcgGGCTCGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGAATGc > 1:2782071/1‑150 (MQ=255) ggggAGCCCGCGTAGAGGCCTCCACAGCCTTGTATCTGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGTGGCTCTGATTCAAGGTAGATCATAATGCGGTTAGCCGAATGCCAc < 2:292630/147‑1 (MQ=255) ggCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGAATGCCAc < 2:8805986/150‑1 (MQ=255) gAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGAATGCCACCGa < 2:1848586/150‑1 (MQ=255) gAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGAATGCCACCGa > 1:5149034/1‑150 (MQ=255) | GACAGCGGACGCATCAACGCCATGCTGGCTCCTTGCTTGTGCACAAATGATTTGTGGGATGCGACTGTGAGCGTAGTTCAGGGTTCGATAAACATCACTGACGGGGGCCATGCTGGCATTTTTGGTGCCTGCGGGGGCCTCTTCGCGGGCGAGCCCGCGAAGAGGCCTCCACAGCCATGTATCAGTATCTGCCATATCCAGAAACCATCAGGCATCGG‑CCATCCCCGTTCCAACCGCTACCTTTCACAGGGAGGCTCACATTCAAGGAAGATCAAAATGCCGTTAGCCGAATGCCACCGA > NC_002947/5908019‑5908318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |