| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,929,556 | A→C | 10.6% | intergenic (‑121/+76) | gcvP‑II ← / ← gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,929,556 | 0 | A | C | 10.6% | 731.8 / 3.5 | 281 | intergenic (‑121/+76) | gcvP‑II/gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Reads supporting (aligned to +/- strand): ref base A (142/92); new base C (3/34); total (145/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.21e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 282 total aligned reads displayed.
AGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTC > NC_002947/5929407‑5929704 | gTTGCTGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACGTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAGGCCGCTCCTACAg > 2:5771478/1‑150 (MQ=255) gTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGAGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAg > 2:1744197/1‑150 (MQ=255) ttGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAgg < 2:4635892/150‑1 (MQ=255) ttGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAgg < 2:6085422/150‑1 (MQ=255) ttGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAgg < 2:733593/150‑1 (MQ=255) aTGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGc < 2:4310858/150‑1 (MQ=255) tGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCt < 1:8771406/150‑1 (MQ=255) gCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCTCCAACAGGGGCTg > 1:1323544/1‑150 (MQ=255) cAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTACAAAAGGGGCTGc > 2:4052237/1‑150 (MQ=255) gggATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCAc < 1:3335003/150‑1 (MQ=255) gATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCAccc < 1:851828/150‑1 (MQ=255) cGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGACTAAAGCCGCTCCTACAGGGGCTGCACCCGtctc < 2:6461498/150‑1 (MQ=255) gACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCACCACAAACAAGGGCTGAAccccaaacg > 1:1246540/1‑144 (MQ=255) tGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAAt > 2:1322965/1‑150 (MQ=255) ggACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGc > 1:2753207/1‑150 (MQ=255) gACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCa < 2:7533135/150‑1 (MQ=255) aTGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTg > 1:5102954/1‑150 (MQ=255) gacgacGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCt > 2:3484395/1‑150 (MQ=255) gacgacGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCt < 2:837608/150‑1 (MQ=255) gacgacGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCGCGAATGCAGTGCt > 1:1433241/1‑150 (MQ=255) acgacgCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTg < 2:6803632/150‑1 (MQ=255) gacgCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCTACAGGGGCTGCACCCGGCTCGAATGCAGTGCTGTa > 1:699295/1‑150 (MQ=255) gacgCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCTACAGGGGATGCACCCGTCTCGAATGCACTGCAGTa > 1:8768789/1‑150 (MQ=255) gCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCt < 2:305732/150‑1 (MQ=255) gCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCt < 2:4963451/150‑1 (MQ=255) tctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGTATGCAGTGCTGTACCtgt > 2:4116100/1‑150 (MQ=255) tctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCtgt < 2:1450121/150‑1 (MQ=255) tctctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAACCCCTCCGACACGGGCGGCACCCCACTCGAATGCAGGGCTGTaacagt > 1:7702777/1‑145 (MQ=255) tctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTAACTgtgt > 1:7143617/1‑150 (MQ=255) ttCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAg < 2:5606021/150‑1 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGc < 1:4871170/150‑1 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGc < 1:8653461/150‑1 (MQ=255) aGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCCCAACTAAACGGGCTGCACCCGGCTCGAATGCCGTGCGGTACCAGTGTGGGAGCg > 1:6782007/1‑150 (MQ=255) gACCAGGCCTCATGGAAACTTACACGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCgg < 2:6918577/150‑1 (MQ=255) gACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCgg < 1:7420722/150‑1 (MQ=255) aCCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGc < 1:5419980/150‑1 (MQ=255) cAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGTCtt < 2:1979242/150‑1 (MQ=255) aGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCttt < 1:6125953/150‑1 (MQ=255) ggCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTa < 1:2219836/150‑1 (MQ=255) ggCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTa < 2:799568/150‑1 (MQ=255) ccTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCAACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGc > 1:4246698/1‑150 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTAc < 2:7072456/127‑1 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGGGTAGGAGCGGCTTTAGCcg > 2:6737818/1‑150 (MQ=255) tGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTAAAGCcgctc < 1:4771803/150‑3 (MQ=255) ggAAACTTACAAGTCTAGGATGGGTTTGCCGTTTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGAAGTGCTGTACCTGTTTAGGAGCGGCTTTAGCCGCGaa < 2:1911168/150‑1 (MQ=39) ggAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTAAAGCcgctcc < 2:8528674/150‑4 (MQ=255) aaaCTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGGCTCGAATGCAGTGCTGTACCGGTGTAGGAGCGGCTTTAGCCGCGaagc > 2:285459/1‑150 (MQ=255) aaaCTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACAGGGGCTGCCCCCCTCACGAATGCAGTGCTGTACCGGTGTAGGAGCGGCGTTATCCCCGaacc > 2:7351848/1‑148 (MQ=255) ttACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGacgcaagc > 2:8666348/1‑150 (MQ=255) ttACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGaagcaagc > 2:7737257/1‑150 (MQ=255) ttACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCCTCTCGAATGCAGGGCTGTACCGGTGTAGGAGCGGCGTTAGCCGCGaagcacgc > 2:2238464/1‑150 (MQ=39) tACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCGAAATCCGCGCCAACAAGGGGTGCACCCGGCGCGAAATGAGTGCGGTTCCGGTGTTGGTTCGGGGTTAGCCGCGAagcaacca > 1:6645550/1‑150 (MQ=255) aCAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCGTTAGCCGCGAAgcaagcaa > 2:7457807/1‑150 (MQ=255) aaGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCGCTCCTAAAGGGGCTGCACCCCGGGCGAATGCAGTGCTGTAACAGTGTATGGGCGGCTTTAGCCGCGAAgcaagcaaag > 1:1987577/1‑148 (MQ=255) aaGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTACTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGGAACGGTGTAGGCGCGGCGTTAGCCGCCGAGCAAGCAAcg > 1:3573928/1‑150 (MQ=255) tAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTc < 2:7957071/150‑1 (MQ=255) ggAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCA‑CCATCTCGAATGCAGTGCTGTACCTGTGGAGGAGCGGCTTTATCCGCGAAGCAAGCAACCCGGTCTTa > 1:7910321/1‑150 (MQ=38) aTTGCCTTTTGTGCGGGGATACTTGTTTGCCGGCCCGGCCTCTTCGCGGCAAAAGCCGCTCCACCCGGGGCTGCACCGGTGTGGATTGCCGTGCTGTACCTTTGTTGTAGCGCATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGcc < 2:931132/150‑1 (MQ=255) ttGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAAAGGGGCTGCACCCGTCTCGAATGCCGTGCTGTGCCGGTGGAGGAGCGGCTTTAGCCGCGGAGCGAGCAACGCGGTCTTACTAGccc > 1:1935222/1‑149 (MQ=255) gCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTACACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCaaa > 2:5597188/1‑149 (MQ=255) ccGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCACCAACAGGGGCTGCACCCCTCACGAATGCACTGCTGTACCAGTGTAGGAGCGGCTGTAGCCCCGAAGCAAGCCACCCGCTCTTACACGCCaaac > 1:6503757/1‑148 (MQ=255) gATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCAGCACCCGTCGCGAATGCAGTGCGGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCac > 2:2639341/1‑149 (MQ=255) ttGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCGGTGTAGGAGCGGCGTTAGCCGCGAAGCAAGCAACGCGGTCTTACACGCCAAACAccg > 2:7363802/1‑150 (MQ=39) gtgCGGGGAAACTTGTTTGCCGGCCCGGCCTCTTCGCGGCTAATGCCGCTCCTACCGGGGCTGCACCCGTCTCTAATGCAGTGCTGTACCTGTGTAGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGcc < 2:6125843/150‑1 (MQ=255) tgCGGGGAAACTTGTTTGCAGGCCGGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCt < 2:5105990/150‑1 (MQ=255) gCGGGTAAACTTGTTTGCCGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGCGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTg < 2:1836905/150‑1 (MQ=39) gCGGGGAAACTTTTTTGCAGGCCCGGCCTCTTCGCGGCTAACGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCCGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTg < 1:2106242/150‑1 (MQ=255) gCGGGGAAACTTGTTGGCCGGCCCGGCCTCTGCGCGGCTAACGCCGCTCCTACCGGGGCGGCACCCGTCTCGACGGCATGGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTg < 2:7635859/150‑1 (MQ=255) ggggAAACTTTTTTGCAGGCCCGGCCCCTGCGCGGATAACCCCGCTCCTACTGGGGCTGCACCCGACTCGAATGAAGTGCTGTCCCGGTGTTGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGt < 1:7263010/150‑1 (MQ=255) ggggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCGACAGGGGCTGCACCCGTCTCGAATGCACTGCGGTACCAGTGTAGGAGCGGCTTTAGCCGCGAACCAAGCAACGCGGTCTTAATCGCCAAACACCGCCAGGt > 2:1541035/1‑150 (MQ=255) gggAACCGTGTGGGCCGGCCCGGCCTCAGCGCGGCTAAAGCCGCGCCGCCCGGGGCTGCACCCGTCTCGACTGCAGTGCTGTACGTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTa < 2:6430671/150‑1 (MQ=255) gggAAACTTTTTTGCTGGCCCGGCCTCTTCGCGGCCAACGCCGCTCCTACTGGGGCTGCACCCGTCTCGAATGAAGTGCTTTACCTGTGTTGGAGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTa < 2:5979306/150‑1 (MQ=255) gggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCTGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTa < 2:2033449/150‑1 (MQ=255) gggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCAGCACCCCTCTCGAATGCAGTTCTGTACCGGTGTAGGAGCGGCGTTAGCCGCGAAGCAAGCAACGCGGGCTTACTCGCCAATCAGCGCCAGGTa > 2:4509346/1‑150 (MQ=39) aCTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCGGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCACCGCGGTCTTACTCGCCAATCAGCGCCAGGTagccag > 2:3469255/1‑150 (MQ=255) ttGTTTGCCGGCCCGGCCTCTTCGCGGCTAACGCCGCTCCTACCGGGGCTGCACCGGTCTCGAATGCTGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagccagcc < 2:3282813/150‑1 (MQ=39) ttGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAAATGGGGTGGACCCGTGTCGAATTGAGTTGTGTACGTTTGTTGGATCGGGTTTATCCGCGTAGCAAGAAACGCGGTGTTTCTGGCCAATAAGGGCCTGGTagccagcc > 2:1799531/1‑150 (MQ=255) cggCCGGGCCTCTTCGCGGCTAACGCCGCTCCTCCGGGGGCTGCACCCGTCTCTATGGCCGTGCTGTACCGGTTTCGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAg < 1:6022761/149‑1 (MQ=255) aGGCCCGGCCTCTTCGCGGCTAAATCCCCTACTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAAAGCGGTATTACTCGCCAATCAGCGCCAGGTAGCCAGCCGCATCCac > 1:5796149/1‑149 (MQ=255) ccGGCCTCTTCGCGGCTAACGCCGCTCCTCCCGGGGCTGCACCCGTCTCTAATGCCGTGCTGTACCTGTGTAGGTGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAAc < 2:2430281/150‑1 (MQ=255) ctctTCGCGGATAACGCCGCTCCTACCGGGGCGGCCCCCGTCTGGATTGCTGTGCTGTACCTGTGTAGGAGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCACTCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTc < 2:8298228/150‑1 (MQ=255) tctTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTcc < 2:7826729/150‑1 (MQ=255) tctTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTAATCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTcc > 1:7245292/1‑150 (MQ=255) ctTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCa < 2:4914822/150‑1 (MQ=255) ctTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAAGGCAGTGCTGTACCTGTGTTGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCa < 2:357015/150‑1 (MQ=255) ttCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCGTTAGCCGCGAAGCAACCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACATGTCCAg > 1:8674548/1‑150 (MQ=255) tAACGCCGCTCCACCCGGGGCTGCACCCGTCGCTACGGCTGTGCTGTACCTGTGTCGGCGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCg < 1:4593526/150‑1 (MQ=255) aacgCCGCTCCTACCGGGGCTGCACCCGTCTCTAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCgg < 2:6681454/147‑1 (MQ=255) gcaccTACCGGGGCTCCACCCTTCTTCACTGCTGTGGTGTACGTGTGTCGGCGCGGCTTCCCCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt < 1:104904/147‑1 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTc < 1:5045639/132‑1 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTc > 2:5045639/1‑132 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 2:6963695/1‑150 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 1:4488669/1‑150 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 1:8156008/1‑150 (MQ=255) gCTCCTACAGGGGATGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 1:5224677/1‑150 (MQ=255) cTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGTGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGc > 2:7402620/1‑150 (MQ=255) cTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGc > 1:608911/1‑150 (MQ=255) cTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGc > 2:8750271/1‑150 (MQ=255) tACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCt < 2:476358/150‑1 (MQ=255) tACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCt < 2:8235537/150‑1 (MQ=255) | AGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTC > NC_002947/5929407‑5929704 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |