| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,929,591 | T→G | 6.4% | intergenic (‑156/+41) | gcvP‑II ← / ← gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,929,591 | 0 | T | G | 6.4% | 810.9 / 3.2 | 287 | intergenic (‑156/+41) | gcvP‑II/gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Reads supporting (aligned to +/- strand): ref base T (122/128); new base G (22/6); total (153/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.72e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 300 total aligned reads displayed.
GCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTC > NC_002947/5929442‑5929740 | tctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTgtgt < 2:5613370/150‑1 (MQ=255) tctTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTAACTgtgt > 1:7143617/1‑150 (MQ=255) ttCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAg < 2:5605899/150‑1 (MQ=255) ttCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACAGGGGCTGCACCCGTCTCGAATGCCGTGCTGTACCGGTGTAg > 2:1556784/1‑150 (MQ=255) cTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAg < 1:3449232/150‑1 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGc < 1:730979/150‑1 (MQ=255) aGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCCCAACTAAACGGGCTGCACCCGGCTCGAATGCCGTGCGGTACCAGTGTGGGAGCg > 1:6782007/1‑150 (MQ=255) gACCAGGCCTCATGGAAACTTACACGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCgg < 2:6918577/150‑1 (MQ=255) aCCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGc < 1:5419980/150‑1 (MQ=255) cAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGTCtt < 2:1979242/150‑1 (MQ=255) aGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCttt < 1:6125953/150‑1 (MQ=255) aGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTGTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCatt < 2:8023124/150‑1 (MQ=255) ccTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCCCACCAACAGGGGCTGCACCCCTCTCGAAATGAGTGCGGTAACAGTGTATGTGCGGCTTTTGc > 1:4530514/1‑150 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGACGCTACAACAGTGGCTGCACCCGTCGCGAATGCAGTGATGTACCTGTGTAGGAGCGGCTTTAGCcg > 2:6737875/1‑150 (MQ=255) aTGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCACCAACACGGGCTGCACCCCGCTCGAAATCAGTGCTGTACCTGTGTTGGAGCGGCGTTAGccccc > 1:6079501/1‑147 (MQ=255) ggAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGaa > 2:8761218/1‑150 (MQ=255) ggAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTAAAGCcgctcc < 2:8528674/150‑4 (MQ=255) aaaCTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAACAGGGGCTGCCCCCCTCACGAATGCAGTGCTGTACCGGTGTAGGAGCGGCGTTATCCCCGaacc > 2:7351848/1‑148 (MQ=255) ttACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCGGTGTAGGAGCGGCTTTAGCCGCGaagcaagc > 2:2860144/1‑150 (MQ=255) tACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGACACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAagcaagca > 2:8716023/1‑150 (MQ=255) tACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCGAAATCCGCGCCAACAAGGGGTGCACCCGGCGCGAAATGAGTGCGGTTCCGGTGTTGGTTCGGGGTTAGCCGCGAagcaacca > 1:6645550/1‑150 (MQ=255) aCAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCGTTAGCCGCGAAgcaagcaa > 2:7457807/1‑150 (MQ=255) aaGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGGCTCGAATGCAGTGCTGTTACTGTGTAGGAGCGGGGTTAGCCGCGTAGCCAGCAAcg > 1:3574224/1‑150 (MQ=255) aaGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCACCAACAGGGGCTGCACCCCTCGCGAAAGCAGTGCTGTAACGGGGTAGGAGCGGCGTTAGCCGCGAAGCAAGCAAcc > 1:1987546/1‑149 (MQ=255) ttggAGGGGATTGCCGTTGGTGGGGGGAAACTTGTTGGCGGGCCCGGCCTCGTGGCGGCTAACGCGGCTCCGACGGGGGCTGCACCGTGCGCGACGGCCGTGCTGTCCGTTTGGTGGTGCGGCTTTTGCCGCGAAGCAAGCAACGCGGTc < 2:4065754/148‑1 (MQ=255) ggAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCA‑CCATCTCGAATGCAGTGCTGTACCTGTGGAGGAGCGGCTTTATCCGCGAAGCAAGCAACCCGGTCTTa > 1:7910321/1‑150 (MQ=38) gAAGGGATTGCCGATTGTGCGGGTAAACTTGTTTGCAGGCCCGGCCTATTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTa < 2:2010743/150‑1 (MQ=255) gtttGCCGATTGTGCGGGTAAAGTTGTTGGCTGGCCGGGCCTCTGCGCGGCTAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCCTTGCTGTACCTGTTTTGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGc < 1:8705202/148‑1 (MQ=255) gATTGCCTATGGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGATAAAGCCGCTCCTACCGGGGCTGCACCCGTCTCTAATGAAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGc < 2:4422727/150‑1 (MQ=255) gCCGTTTGTGCGGGTAAACTTTTTGGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACTGGGGCTGCACCCGTCTCGAATGCATTGCTGTACCTGTGTAGGAGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAAt < 2:3318942/150‑1 (MQ=39) gCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACTGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAAt < 2:2124383/150‑1 (MQ=255) ccGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAAAGCAGTGCTGTACCTGTGTAGGAGCGGCGTTAGCCGCGGAGCCAGCAACGCGGGCGTACTCGCCCATc > 2:7757518/1‑150 (MQ=39) ccGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCACCAACAGGGGCTGCACCCCTCACGAATGCACTGCTGTACCAGTGTAGGAGCGGCTGTAGCCCCGAAGCAAGCCACCCGCTCTTACACGCCaaac > 1:6503757/1‑148 (MQ=255) gATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCAGCACCCGTCGCGAATGCAGTGCGGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCac > 2:2639341/1‑149 (MQ=255) tgtgCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAgcgc < 2:6451145/150‑1 (MQ=255) tgCGGGGAAACTTGTTTGCAGGCCGGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCt < 2:5105990/150‑1 (MQ=255) tgCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAATCCCCTACTACAGGGGCTGCCCCCGTCTCGAATTCACTGCTGGACCGGGGTAGGAGCGGCGTTAGCCGCCAAGCAAGCAACCCCGTCTTAAGCGCCAAAAAGCGcca > 2:2399845/1‑149 (MQ=255) gCGGGGAAACTTTTTTGCAGGCCCGGCCTCTTCGCGGCTAACGCCGCTCCTACCGGGGCTGCACCCGTCTCGAATGCCGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTg < 1:2106242/150‑1 (MQ=255) gCGGGGAAACTTGTTGGCCGGCCCGGCCTCTGCGCGGCTAACGCCGCTCCTACCGGGGCGGCACCCGTCTCGACGGCATGGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTg < 2:7635859/150‑1 (MQ=255) gAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCAACGACAGGGGCTGCACCCCTATAGAATGCAGGGCTGTACCAGGGTAGGAGCGGCGTTAGCCGCGAAGCAACCAACGCGGTCTTAATCGCCAAACACCGCCGGGTagc > 1:4973342/1‑150 (MQ=255) ttGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAg < 1:2302380/85‑1 (MQ=255) tttGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCACCGAAAGGGGCTGCACCCCTCTCGGATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTATCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATAAGCGCCGGGTAGCCACCCGCa > 2:1843194/1‑150 (MQ=255) aGGCCCGGCCTCTTCGCGGCTAAATCCCCTACTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAAAGCGGTATTACTCGCCAATCAGCGCCAGGTAGCCAGCCGCATCCac > 1:5796149/1‑149 (MQ=255) ccGGCCTCTTCGCGGCTAATGCCGCTCCTACAGGGGCTGCACCCGTCTCTATTGCTTTGCTGTACCTGTGTTGGAGCGGTTTTTGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAAc < 2:671991/150‑1 (MQ=255) ccGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAAc > 2:7976993/1‑150 (MQ=255) gtaggagcgGCTTTAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTc > 2:3474137/7‑150 (MQ=255) ctctTCGCGGATAACGCCGCTCCTACCGGGGCGGCCCCCGTCTGGATTGCTGTGCTGTACCTGTGTAGGAGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCACTCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTc < 2:8298228/150‑1 (MQ=255) tctTCGCGTATAAAGCCGCTCATACCGGGGGTGCACCCTTCTCTATTGCTTTGATGTACCGGTTTCGTAGGGGGTTTCGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTcc < 1:8250263/150‑1 (MQ=255) tctTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACATGTcc > 1:7245353/1‑150 (MQ=255) ttCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCCAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCGGGTAGCCAGCCGCCTCCAGCAACTTGTCCAg > 1:8674530/1‑150 (MQ=255) gCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGc > 2:459853/1‑150 (MQ=255) gCTAAAGCCGCTCCTACAGGGGCTACACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGc > 2:4998979/1‑150 (MQ=255) tAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCg > 2:6345737/1‑150 (MQ=255) tAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCg > 1:1453909/1‑150 (MQ=255) aaaGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACGTGTCCAGCTCGGCCgg > 1:4814000/1‑150 (MQ=255) aGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGt > 2:1529308/1‑150 (MQ=255) aGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGt > 2:6091134/1‑150 (MQ=255) ccGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTg > 1:4706660/1‑150 (MQ=255) cGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGc > 2:7271924/1‑150 (MQ=255) gcaccTACCGGGGCTCCACCCTTCTTCACTGCTGTGGTGTACGTGTGTCGGCGCGGCTTCCCCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt < 1:104904/147‑1 (MQ=255) gCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 2:6963695/1‑150 (MQ=255) gCTCCTACAGGGGATGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCt > 1:5224677/1‑150 (MQ=255) ccTACGGGGGCCGCCCCCGTCTCTATTGCTGTGGTGTACCTTTTTTGGCGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTgg < 1:2200230/150‑1 (MQ=255) ccTACCGGGGCTGCACCCGTCTCTACGGCTGTGCTTTCCCTGTGTTGGCGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTgg < 1:128506/150‑1 (MQ=255) cTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGTGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGc > 2:7402620/1‑150 (MQ=255) tACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCt < 2:476358/150‑1 (MQ=255) tACCGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCt < 2:8235565/150‑1 (MQ=255) ccggggCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTc < 1:4916992/148‑1 (MQ=255) cAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTc > 2:7836663/1‑150 (MQ=255) gggCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAt < 2:1323791/150‑1 (MQ=255) gggCTGCACCCGTCTCGAAGGCTGTGGTTTACCTGTTTAGGAGGGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAt < 1:5892117/150‑1 (MQ=255) ggcggcACCGGTCTCGAAGGCTGGGCTGGACCGGTGTCGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAtt < 1:7457708/150‑1 (MQ=255) tGCACCCGTCTCTATTGCTTTGGTTTACGTTTGTTGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGa < 1:423563/150‑1 (MQ=255) tGCACCCGTCTCGACTGCAGTGCTGTACCTGTGTAGGAGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGa < 2:1222989/150‑1 (MQ=255) cACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAg > 1:4075875/1‑150 (MQ=255) cACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAg > 1:944898/1‑150 (MQ=255) aCCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGa < 2:8129276/150‑1 (MQ=255) aCCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGa > 1:1896240/1‑150 (MQ=255) ccGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATc > 2:5594388/1‑150 (MQ=255) cGTCTCGGATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATcc > 1:4425635/1‑150 (MQ=255) tcGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGa > 2:3069593/1‑150 (MQ=255) tcGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGa > 2:7071235/1‑150 (MQ=255) gAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAAc > 2:7374046/1‑150 (MQ=255) aaTGCTGTGCTGTACGTGTGTTGGAGCGGTTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAAcc < 1:8629633/150‑1 (MQ=255) cAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTaa < 2:1818750/150‑1 (MQ=255) cAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTaa > 2:4828376/1‑150 (MQ=255) aGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAg > 1:6359355/1‑150 (MQ=255) gTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAgg < 2:2753207/150‑1 (MQ=255) tGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGc > 1:3989598/1‑83 (MQ=255) tGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGc < 2:3989598/83‑1 (MQ=255) tGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGc > 2:455521/1‑150 (MQ=255) tGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGc > 2:430328/1‑150 (MQ=255) tGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGctct > 2:4741124/1‑150 (MQ=255) gTACCTGTGTTGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTCGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCtt < 2:1433241/150‑1 (MQ=255) gTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCtt > 1:5136959/1‑150 (MQ=255) tACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTc > 1:262821/1‑150 (MQ=255) ccTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGt > 2:494030/1‑150 (MQ=255) cTGTGTTGGCGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGtt < 1:7587496/150‑1 (MQ=255) tgtgTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTc < 2:3033140/150‑1 (MQ=255) tgtgTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTc > 2:3610289/1‑150 (MQ=255) | GCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACAGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTC > NC_002947/5929442‑5929740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |