Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,952,103 T→C 7.2% intergenic (‑90/+116) ubiD ← / ← rho 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,952,1030TC 7.2% 857.7 / 35.6 279intergenic (‑90/+116)ubiD/rho3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
Reads supporting (aligned to +/- strand):  ref base T (118/139);  new base C (18/2);  total (138/141)
Fisher's exact test for biased strand distribution p-value = 1.07e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01

Only 100 of 289 total aligned reads displayed.

TTGAGCTCGCCGCGCTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCG  >  NC_002947/5951955‑5952252
                                                                                                                                                    |                                                                                                                                                       
 tGAGCTCGCCGCGCTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCttt                                                                                                                                                       >  1:1349634/1‑150 (MQ=255)
  gAGCTCGCCGCGCTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTg                                                                                                                                                      >  2:5480508/1‑150 (MQ=255)
   aGCTCGCCGCGCTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGc                                                                                                                                                     <  2:821652/150‑1 (MQ=255)
       cgccgcGCTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATcc                                                                                                                                                 <  2:5257873/150‑1 (MQ=255)
       cgccgcGCTGGTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATcc                                                                                                                                                 <  2:4450786/150‑1 (MQ=255)
         ccgcGCTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCt                                                                                                                                               >  2:1442775/1‑150 (MQ=255)
           gcgcTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTc                                                                                                                                             >  1:2354931/1‑150 (MQ=255)
             gcTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCCTTGCGGCCCTTcgc                                                                                                                                           <  2:4057872/150‑1 (MQ=255)
                 ttCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑aa                                                                                                                                     >  1:7434931/1‑150 (MQ=255)
                 ttCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑aa                                                                                                                                     >  1:5045300/1‑150 (MQ=255)
                 ttCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑aa                                                                                                                                     <  2:2775589/150‑1 (MQ=255)
                 gtCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑aa                                                                                                                                     <  2:2640474/149‑1 (MQ=255)
                    cAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGcc                                                                                                                                  <  2:8067572/150‑1 (MQ=255)
                    cAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGcc                                                                                                                                  >  1:2270026/1‑150 (MQ=255)
                     aGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGccc                                                                                                                                 <  1:538442/150‑1 (MQ=255)
                       gCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGc                                                                                                                               <  1:5821608/150‑1 (MQ=255)
                         cACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTc                                                                                                                             >  2:4770197/1‑150 (MQ=255)
                          aCGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTcc                                                                                                                            >  2:643699/1‑150 (MQ=255)
                           cGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCt                                                                                                                           <  1:4152664/150‑1 (MQ=255)
                              aTGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACa                                                                                                                        <  2:6339711/150‑1 (MQ=255)
                               tGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACaa                                                                                                                       <  2:605457/150‑1 (MQ=255)
                               tGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACaa                                                                                                                       <  2:1652899/150‑1 (MQ=255)
                               tGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACaa                                                                                                                       <  2:7353043/150‑1 (MQ=255)
                                 aaGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAgg                                                                                                                     <  1:5602034/150‑1 (MQ=255)
                                 aaGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAgg                                                                                                                     <  1:5680252/150‑1 (MQ=255)
                                 aaGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCGTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAgg                                                                                                                     >  1:3878484/1‑150 (MQ=255)
                                  aGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGGGTGTAGCGCCGTTCGGGCCGGGGTGGGGGGTGAAAAGGCAGGGGGGCCGCGGTGCCTCCCGGCGCGG‑‑ACGCCCGCGCCGACACggg                                                                                                                    >  2:7855330/1‑150 (MQ=255)
                                  aGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAggg                                                                                                                    <  2:4932011/150‑1 (MQ=255)
                                    tCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGcc                                                                                                                  <  2:7207857/150‑1 (MQ=255)
                                    tCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGcc                                                                                                                  >  2:3355597/1‑150 (MQ=255)
                                    tCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGGTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGcc                                                                                                                  >  2:5002133/1‑150 (MQ=255)
                                     cgcgCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCg                                                                                                                 <  1:3781613/150‑1 (MQ=255)
                                      gcgcAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGc                                                                                                                <  1:575184/150‑1 (MQ=255)
                                      gcgcAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGc                                                                                                                >  2:4198495/1‑150 (MQ=255)
                                            gTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGAc                                                                                                          <  1:1801955/150‑1 (MQ=255)
                                             tCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATcc                                                                                                                                                 <  2:2902630/112‑1 (MQ=255)
                                             tCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGAcc                                                                                                         >  1:1040018/1‑150 (MQ=255)
                                              cgcgATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGc                                                                                                                <  1:4578973/142‑1 (MQ=255)
                                               gcgATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCtg                                                                                                       >  1:6631161/1‑150 (MQ=255)
                                               gcgATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCtg                                                                                                       >  2:6602367/1‑150 (MQ=255)
                                                cgATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCtgt                                                                                                      <  1:2835243/150‑1 (MQ=255)
                                                 gATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCtgtg                                                                                                     >  1:2031887/1‑150 (MQ=255)
                                                  aTACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGc                                                                                                    >  1:2689215/1‑150 (MQ=255)
                                                  aTACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGc                                                                                                    <  2:2575423/150‑1 (MQ=255)
                                                  aTACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGc                                                                                                    >  1:128050/1‑150 (MQ=255)
                                                   tACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCa                                                                                                   <  1:6231379/150‑1 (MQ=255)
                                                   ggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgATTGGGGCCGCCTTGCGGCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCa                                                                                                   >  2:7240762‑M1/87‑150 (MQ=255)
                                                   ggtcgacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgATTGGGGCCGCCTTGCGGCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCa                                                                                                   >  2:6806807‑M1/87‑150 (MQ=255)
                                                       gacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgATTGGGGCCGCCTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAg                                                                                               <  2:4877481‑M1/68‑1 (MQ=255)
                                                        catgcaGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGc                                                                                              <  2:896164/150‑1 (MQ=255)
                                                        catgcaGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGc                                                                                              >  1:665651/1‑150 (MQ=255)
                                                        acaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGa                                                                                                >  1:8441978‑M1/82‑150 (MQ=255)
                                                         atgcaGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCg                                                                                             >  1:3575016/1‑150 (MQ=255)
                                                           gcaGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCggg                                                                                           <  1:4940714/150‑1 (MQ=255)
                                                           gcaGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCggg                                                                                           <  2:595400/150‑1 (MQ=255)
                                                           gcaGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCggg                                                                                           <  1:6090749/150‑1 (MQ=255)
                                                           agctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgATTGGGGCCGCCTTGCGGCCCTTCGCGGGAAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCgg                                                                                            >  1:8021153‑M1/79‑150 (MQ=255)
                                                            caGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGc                                                                                          <  1:2574922/150‑1 (MQ=255)
                                                             ctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgATTGGGGCCGCCTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCggg                                                                                           >  1:3462646‑M1/77‑150 (MQ=255)
                                                               gAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTg                                                                                       >  1:6935762/1‑150 (MQ=255)
                                                                  ccTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGccc                                                                                    >  2:7493627/1‑150 (MQ=255)
                                                                    tCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCcgc                                                                                  <  2:15209/150‑1 (MQ=255)
                                                                    tCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCcgc                                                                                  >  1:3648556/1‑150 (MQ=255)
                                                                    tCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCcgc                                                                                  >  2:3156727/1‑150 (MQ=255)
                                                                      gtgtTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCAAGCCcgctc                                                                                <  1:1848680/150‑3 (MQ=255)
                                                                       tgtTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGaa                                                                               >  2:8618773/1‑150 (MQ=255)
                                                                            gCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGcc                                                                          <  1:4271806/150‑1 (MQ=255)
                                                                            gCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGATCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAACGGCCGCAATGACCTGAGCAGGAGCGGGCTTGCCCGCGAAGGGcc                                                                          >  2:1880785/1‑150 (MQ=255)
                                                                             ccaacgatgagttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCg                                                                         >  2:2105393‑M1/61‑150 (MQ=255)
                                                                                 aTCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACACGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAg                                                                     <  2:1811013/150‑1 (MQ=255)
                                                                                 aTCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAg                                                                     <  2:6235689/150‑1 (MQ=255)
                                                                                   cggtcggGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAggc                                                                   <  1:5162779/150‑1 (MQ=255)
                                                                                      tcggGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAggcggc                                                                <  1:7876955/150‑1 (MQ=255)
                                                                                      tcggGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAggcggc                                                                <  2:168967/150‑1 (MQ=255)
                                                                                      agttcttcctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgATTGGGGCCGCCTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAggcggc                                                                >  2:3945452‑M1/52‑150 (MQ=255)
                                                                                       cggGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGcc                                                               <  1:751894/150‑1 (MQ=255)
                                                                                        ggggTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGccc                                                              <  2:6666074/150‑1 (MQ=255)
                                                                                          ggTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCca                                                            >  1:8530430/1‑150 (MQ=255)
                                                                                          ggTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCca                                                            >  1:1499592/1‑150 (MQ=255)
                                                                                          ggTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCca                                                            >  2:3575715/1‑150 (MQ=255)
                                                                                           gTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCcaa                                                           <  2:47900/150‑1 (MQ=255)
                                                                                             gCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCcaatc                                                         >  1:4759050/1‑150 (MQ=255)
                                                                                             cctgtcgatgaagcgcaagtaagcgagcgtttcaggctggattgATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACACGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCCTtgcggcccttcgc                                                         >  1:921027‑M1/45‑145 (MQ=255)
                                                                                              cAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCcaatca                                                        >  2:7599494/1‑150 (MQ=255)
                                                                                                                 ggCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAAcgctcg                                     <  2:3440139/150‑1 (MQ=255)
                                                                                                                     ttGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTa                                 >  1:6444776/1‑150 (MQ=255)
                                                                                                                      tGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTAc                                <  2:1734304/150‑1 (MQ=255)
                                                                                                                          tGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTgc                            <  2:3371609/150‑1 (MQ=255)
                                                                                                                           gggggTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCtgtg                                                                                                     <  2:2268833/76‑1 (MQ=255)
                                                                                                                               gTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTc                       >  1:8124881/1‑150 (MQ=255)
                                                                                                                               gTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTc                       >  1:7313391/1‑150 (MQ=255)
                                                                                                                                tGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCa                      <  2:1349634/150‑1 (MQ=255)
                                                                                                                                tGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCa                      <  1:4694884/150‑1 (MQ=255)
                                                                                                                                  aaaaTGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATc                    <  1:6724500/150‑1 (MQ=255)
                                                                                                                                         ATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGga             >  1:2981499‑M1/1‑150 (MQ=255)
                                                                                                                                               GCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACt       >  2:2679745‑M1/1‑150 (MQ=255)
                                                                                                                                                CCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTc      <  1:5323957‑M1/150‑1 (MQ=255)
                                                                                                                                                CCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTAGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTc      <  2:3711573‑M1/150‑1 (MQ=255)
                                                                                                                                                 CGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCa     <  2:8420811‑M1/150‑1 (MQ=255)
                                                                                                                                                   CTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATc   <  2:5270190‑M1/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                       
TTGAGCTCGCCGCGCTGTTCCAGGCCACGAATGAAGTCGCGCAAGTCGCGATACTGCATGCAGGAGCCTCGTGTTGGCCGTATCGGTCGGGGTGCAGAGTGTAGCGCCGTTCGGGCCTTGTTTGGGGGTGAAAATGCATTGGGGCCGCTTTGCATCCCTTCGCGG‑‑AAGCCCGCTCCTACAAGGGCCGCAATGACCTGTGCAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAGGCGGCCCCAATCAATCCAGCCTGAAACGCTCGCTTACTTGCGCTTCATCGACAGGAAGAACTCATCG  >  NC_002947/5951955‑5952252

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: