| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,005,975 | A→T | 9.2% | intergenic (+77/+32) | PP_5256 → / ← amaA | cyclic nucleotide‑binding protein/L‑pipecolate oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,005,975 | 0 | A | T | 9.2% | 525.7 / 3.2 | 192 | intergenic (+77/+32) | PP_5256/amaA | cyclic nucleotide‑binding protein/L‑pipecolate oxidase |
| Reads supporting (aligned to +/- strand): ref base A (97/66); new base T (6/13); total (110/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.70e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 195 total aligned reads displayed.
CCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGG > NC_002947/6005826‑6006120 | ccGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACACGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTa < 1:8676201/150‑1 (MQ=255)ccGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTa < 1:3565594/150‑1 (MQ=255) ttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAg > 1:1042225‑M1/82‑150 (MQ=255) ttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAg > 2:1070427‑M1/82‑150 (MQ=255) ggAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGa < 1:8797589/150‑1 (MQ=255) ggAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGa < 1:8797784/150‑1 (MQ=255) ctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGc > 2:4147334‑M1/78‑150 (MQ=255) aGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGc < 2:6490663/150‑1 (MQ=255) gcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCgg > 2:2508331‑M1/76‑150 (MQ=255) gcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCgg > 2:8711626‑M1/76‑150 (MQ=255) gcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCgg > 1:2164762‑M1/76‑150 (MQ=255) cggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCggg > 1:5060627‑M1/75‑150 (MQ=255) cGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCggg < 1:6990725/150‑1 (MQ=255) cGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCggg < 2:1137616/150‑1 (MQ=255) gttgttgttGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCCGGGTAAACCC‑CACCAACAACTAGTGCACCCCCAGAGAGGGCGGTGGTGAACCAGGAGGAGCgggg > 1:6391992/1‑149 (MQ=255) ttgttgttgCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGtt < 1:577055/150‑1 (MQ=255) ttgCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCACTTCG‑CGGGTAAAACCCCACCAAAAACTAGTGCACCGCCGGAGAGGGCGGTGGTGAACCAGTAGGAGCGGGttttatag > 1:2991277/1‑145 (MQ=255) ttgCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCAGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCGGAGAGGGCGGTGGTGAACCAGTAGGAGCGGGTTTACCcg > 2:5057811/1‑150 (MQ=255) aGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCAGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGaa > 2:2883630/1‑150 (MQ=255) aGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAAACCGCGCCTACAAGTAGTGCACCGCCGGAGAGGGCTGTGGTGAACCGGTAGGCGCGGGTTTACCcgcgca > 2:8405192/1‑148 (MQ=39) aGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAAACCCCGCCTACAACTAGTGCACCGCCGGGGAGGGCTGTGGTGAAACGGTAGGAGCGGGTTTAACCCCGaa > 2:2246335/1‑150 (MQ=255) aGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGGTGGTTGCACAAGTGAGCATGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACCAGTAGTGCCCCGCCGGAGAGGGCGGGGGGGAACCGGAAGGAGCGGGTTTACCCCCGaa > 2:4256230/1‑150 (MQ=38) aGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGGAAACCCCCTCCGACAAGTAGTGCCCCCCCAGAGAGGGCGGTGGTGAACCGGTAGGAGCGGGTTTTCCCCCCAagag > 1:7329322/1‑150 (MQ=255) gCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTTAAACCCCACCAACAATTTGTGCACCCCCGGAGAGGGGTGTGGTGTACCTGTAGGAGCGGGTTTACCCCCGAAGAgg > 1:6525364/1‑150 (MQ=255) ccGGCTTCAATCATGACGGGTGGCTTCATGAGTTGGTTGCACAAGTGAGCGTGTGCGGGCCTCTGCG‑CGGTTAAACCCGCTCATACAATTAGTGCACCGCCTGAGTGGGGTGTGGTGAACCTGTCGGAGCGGGTTTACCCGCGAAGAGGc < 2:7504747/150‑1 (MQ=37) ccGGCTTCAATCACGAAGGGTGGCTTCCTGTGTTGGTTGCAAAAGTGAGCCTGTGCCGGCCTCTTCG‑GGGGTAAACCCTCTCCTACAAGTAGTGCACCGCCTGAGTGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGc < 2:8002977/150‑1 (MQ=38) ccGGCTTCAATCAAGACGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGc < 2:7860480/150‑1 (MQ=255) ccGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAAACCCCTCCGACAAGTAGTGCACCCCCTGAGAGGGGGGTGGTGAACCGGTAGGAGCGGGGTTAACCCCGAAGAGGc > 2:6780567/1‑150 (MQ=255) ggCTTCAATCAAGAAGGGTGGCTTCCTGCGTTGGTTGCACACGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACACGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGATTACCCGCGAAGAGGCCa < 2:583969/150‑1 (MQ=255) ggCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCa < 2:4978903/150‑1 (MQ=255) ttCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAAACCCCGCCAACAACTAGTGCACCCCCGGAGAGGGGGGTGGGGGACCGGGAGGAGCGGGTTTAACCCCGCAGAGGccccta > 2:272171/1‑146 (MQ=255) tcaatcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCGCCTACAAGTAGTTCACCGCCGGGGTGGGCTGTGGTGGACCGGGGGGGGCGGGTGGACCCGCGGAGGGGcccctac > 2:3164949/1‑145 (MQ=25) aatcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAAACCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCCCGAAGAGGCCAGTACtt > 2:2744718/1‑150 (MQ=255) gctgtaccacgcggggcagtgcctgagggttgtgttgtaagtaccGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCgg < 1:1080899‑M1/75‑1 (MQ=255) aagaagGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAAACCGCTCCTACAAGTAGTGCACCGCCTGGGAGGGCTGTGGTGAACCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACATacaa > 2:3520210/1‑150 (MQ=255) gggTGGCTTCGTTAGTTGGTTGCACAAGTGAGCCTGTGCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGTGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaacacaa < 2:6067204/150‑1 (MQ=255) ggCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCCCTCCTACAAGTAGGGCACCGCCGGCGAGGGCTGTGGGGAACCGGGAGGCGCGGGTTTACCCGCGAAGGGGCCAGTACTTACAACACAAccca > 2:6976236/1‑149 (MQ=37) gtCCTGTGTTGGTTGCACACGTGAGCCTGTGCCGGCCACTTCG‑CGGGTAAACCCGCTCCTACACGTCGTGCACCGCCTGAGCGGGCTGTGGTGAACCTGTCGGCGCGGTTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAg < 1:2092179/149‑1 (MQ=38) gAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTTAAACCCCTCCCACAAGGAGTGGCCCCCCGGAGAGGGGGGTGGTGTAACGGTGGGTGCGGGGTTAACCCCGAAGAGGCCCGTACTTACAAAACAACCCGCAGGcccg > 2:2528610/1‑147 (MQ=255) ttggttgCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGcc < 2:1667797/150‑1 (MQ=255) gCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACAGCCCcgcgg > 2:6570219/1‑149 (MQ=255) cacaAGTGCGCCTGTGCCGGCCTCTTCG‑CGGGTAACCCCGCTCCTACACGTAGTGCACCGCCTGCGTGGGCTGTGGTGACCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTg < 2:7436052/150‑1 (MQ=38) acaAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAAACCGCTCCGACAAGTAGTGCACCCCCCGAGAGGGCGGTGGTGTACCGGGAGGGGCGGGGTTAACCGCGAACAGGCCCCGAATTACAACACAACCCCCAGGCACGGcccccccggg > 2:4686891/1‑144 (MQ=255) acaAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAAACCGCTCCGAAAAGTAGTGCACCGCCGGAGAGGGCGGTGGTGGACCGGTAGGAGCGGGTTTACCCGCGCAGCGGCCAGTACATACAAAACAACCCTCAGGCACTGCCCCCCGTgg > 2:5308533/1‑150 (MQ=37) aGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAAACCCCTCCAAAAAGTAGTGCACCCCCCGAGGGGGCTGTGGTGAAACGGTGGGGGCGGGTTTAACCCCCAAGAGGCCAGTTCATAAAAAAAAACCCCCAGCCCCAGCCCCCCGGGGTAc > 2:5250941/1‑150 (MQ=255) tGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAAACCCCAACAACAAATAGTTCACCCCCGGAGAGGGCGGTGGTGTACCATTTGGAGCGGGTTTACCCCCCAAGAGGCCCCTAAATAAAACACAAACCACACGCCCAGCCCCCCGGGGTACac > 2:4117570/1‑149 (MQ=255) gcgCCGGTGCCGGCCTCGTCG‑CGGGAAACCCCGCTCAACCATTTTGTCCCCCGCCTGCGTGGGTTGTGGTGACCGTGTCGGAGGGGTTTAACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGc < 1:8379140/148‑1 (MQ=255) gCCCGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGa < 2:8664833/150‑1 (MQ=255) gtgCCGGCCTCTTCG‑GGGGTAAACCCGCTCCTACAAGTCGTGCACCGCCTGAGAGGGCTGTGGTGAACCTTTAGGAGCGGTTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGaaaaa < 2:313579/150‑1 (MQ=255) gCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACACGTCGTGCACCGCCTGAGCGGGCTGTGGTGACCGTGTTGGCGGGGTTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAAcc < 1:575578/150‑1 (MQ=38) GGCCTCTTCG‑CGGTTAAACCCGCTCCTACAAGTAGTGCACCGCCTTAGAGGGCTGTGGTGAACCTTTTGGAGGGGTTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGa > 1:7804656‑M1/1‑150 (MQ=255) GGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGa > 2:2028244‑M1/1‑150 (MQ=255) TCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCa > 1:3610376‑M1/1‑150 (MQ=255) CTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCAt > 2:4167994‑M1/1‑150 (MQ=255) TCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAg > 2:1569206‑M1/1‑150 (MQ=255) CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAAc < 1:4961192‑M1/150‑1 (MQ=255) GTAAACCCGCTCCTACACGTCGGGCACCGCCTGTGTGGGCTTTGGTGAACCTGTTGTTGGGGTTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCt > 1:4183613‑M1/1‑150 (MQ=255) GTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCt < 2:1576279‑M1/150‑1 (MQ=255) TAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTg < 2:8535809‑M1/150‑1 (MQ=255) CCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCg < 2:3561359‑M1/150‑1 (MQ=255) cGCTCCTACACTTTGTGCCCCGCGTGTGTGGGGTTGGTTTAACCTTTTGGTGGGGTTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCa < 1:8184095/150‑1 (MQ=255) CGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGTTGAACCTGTCGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCa > 1:8082963‑M1/1‑150 (MQ=255) CGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCa > 2:7748587‑M1/1‑150 (MQ=255) TACAAGTTGTGCACCGCCTGAGAGGGCTGTGGTTAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAg > 1:1397978‑M1/1‑150 (MQ=255) TACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAg < 1:4743892‑M1/150‑1 (MQ=255) TACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAg < 1:7616264‑M1/150‑1 (MQ=255) TACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAg < 1:3084297‑M1/150‑1 (MQ=255) cccgtcgtGCACCGCCTGAGAGGGCTGTGGTGCCCCTGTAGGAGCGGGTGACCCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgc < 2:8215641/144‑1 (MQ=255) AAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgcg < 2:1349265‑M1/150‑1 (MQ=255) gttttGCACCGCGTGAGAGGGCTTTGTTGAACCTGTTGGTGGGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgcgcg < 1:8762164/146‑1 (MQ=255) gtagtGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgcgcg > 1:4373559/1‑150 (MQ=255) gtagtGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgcgcg < 2:4234554/150‑1 (MQ=255) gtagtGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgcgcg > 1:2377173/1‑150 (MQ=255) tagtGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAGAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgcgcgc > 1:1457923/1‑150 (MQ=255) agtGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCt < 2:5760820/150‑1 (MQ=255) gCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTcac > 2:3769964/1‑150 (MQ=255) gCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGc < 2:8335890/150‑1 (MQ=255) ccTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCt > 2:2955854/1‑150 (MQ=255) cTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTc > 1:5364651/1‑150 (MQ=255) gagaGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCAt > 2:5532501/1‑150 (MQ=255) gagaGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCAt > 1:3516851/1‑150 (MQ=255) gagaGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCAt > 2:4836512/1‑150 (MQ=255) agagGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATc > 2:3767285/1‑150 (MQ=255) gggtggggtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCg < 1:7109807/144‑1 (MQ=255) ggCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCg > 2:4850725/1‑150 (MQ=255) ggCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCg > 1:67316/1‑150 (MQ=255) ggCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCg > 1:2326373/1‑150 (MQ=255) gtgtgGTGAAGCTGTTGGAGGGGTTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGaa < 1:5312038/149‑1 (MQ=255) tgtgGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGaaa < 2:1798226/150‑1 (MQ=255) ggggtcAACCTGTAGGAGGGGTTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGaaaa < 1:1843596/148‑1 (MQ=255) tggtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAAc < 2:4258936/150‑1 (MQ=255) tggtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAAc < 2:6391032/150‑1 (MQ=255) tggtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAAc > 1:2523652/1‑150 (MQ=255) tggtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAAc > 2:14766/1‑150 (MQ=255) gtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACgg > 1:7312523/1‑150 (MQ=255) cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCgg > 1:1319576/1‑150 (MQ=255) cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCgg > 1:1367894/1‑150 (MQ=255) cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCgg > 2:7507606/1‑150 (MQ=255) cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCgg > 2:516826/1‑150 (MQ=255) cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCgg > 2:4171352/1‑150 (MQ=255) | CCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGG > NC_002947/6005826‑6006120 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |