| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 644,143 | G→C | 5.3% | R293G (CGC→GGC) | acoA ← | acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 644,143 | 0 | G | C | 5.3% | 1359.6 / 45.5 | 399 | R293G (CGC→GGC) | acoA | acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base G (200/178); new base C (17/4); total (217/182) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.29e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
Only 100 of 425 total aligned reads displayed.
GATCTTTCTTGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGAAATGGCCGT > NC_002947/643994‑644292 | gATCTTTCTTGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGAcgcg < 1:6676504/150‑1 (MQ=255)gATCTTTCTTGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCCCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGAcgcg > 2:7792038/1‑150 (MQ=255) aTCTTTCTTGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCgg > 2:4863477/1‑150 (MQ=255) aTCTTTCTTGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCgg > 2:6699192/1‑150 (MQ=255) aTCTTTCTTGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCgg > 2:6773057/1‑150 (MQ=255) ctttcttGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGc < 1:7042014/150‑1 (MQ=255) ctttcttGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGc < 2:5668669/150‑1 (MQ=255) tacttGCCATGGTGGTTCTCCAGGTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGGGGACGTCGGTGAGCAGGAGGGCGGGCGGTGGCTGGGGATCGGATGTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGt > 2:2128062/3‑150 (MQ=255) cttGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCg < 2:4796627/150‑1 (MQ=255) ttGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGa > 2:4921311/1‑150 (MQ=255) ttGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGa > 1:7176699/1‑150 (MQ=255) tGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGAt < 1:1949349/150‑1 (MQ=255) gCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATg > 1:1007224/1‑150 (MQ=255) gCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCCCGCGTCGagg < 2:2571633/150‑3 (MQ=255) cATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGc < 2:8553071/150‑1 (MQ=255) cATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGc < 1:1814092/150‑1 (MQ=255) aTGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCg > 1:2078201/1‑150 (MQ=255) tggtggTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGt > 1:5066667/1‑150 (MQ=255) tggtTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCa < 2:4065430/150‑1 (MQ=255) ggtTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAg > 2:2358647/1‑150 (MQ=255) ttCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGtt < 1:385838/150‑1 (MQ=255) ctcCTGTTGTTCTTGTAATCCGCGGCTCAGGGGGAGGCGACGGAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGc < 2:8141005/150‑1 (MQ=255) tcCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCt > 1:7783935/1‑150 (MQ=255) tgttgtTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCgg > 2:7348656/1‑150 (MQ=255) ttCTTGTACTCCGCGGCTCAGGGGGAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTg < 1:7476242/150‑1 (MQ=255) tCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGa < 2:6906522/150‑1 (MQ=255) ttGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGc > 2:8085835/1‑150 (MQ=255) tGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCa > 2:2213305/1‑150 (MQ=255) gTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAg > 1:554205/1‑150 (MQ=255) gTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAg < 1:2412944/150‑1 (MQ=255) gTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAg > 2:6487539/1‑150 (MQ=255) tAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAgg > 2:4291779/1‑150 (MQ=255) aTCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGcc > 1:3563774/1‑150 (MQ=255) tCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCg > 1:5125135/1‑150 (MQ=255) cgcgGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGgc > 1:4067379/1‑150 (MQ=255) cgcgGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATAAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGgc > 2:7765102/1‑150 (MQ=255) ggCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGcgcg < 2:4966025/150‑1 (MQ=255) gCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCgg < 2:1461983/150‑1 (MQ=255) tCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCCGGCCGGCGCGggt > 1:5381309/1‑150 (MQ=255) tCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGggt > 1:4134779/1‑150 (MQ=255) cAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGGTGCTCGGCCGGGAGCAGGCCGGCGCGggtg < 1:1474392/150‑1 (MQ=255) aGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGggtgg < 2:3185497/150‑1 (MQ=255) gTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCtt < 1:6114149/150‑1 (MQ=255) tAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCttg < 2:2987191/150‑1 (MQ=255) aGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCttgt < 1:6468962/150‑1 (MQ=255) ggCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCttgtt < 2:1592100/150‑1 (MQ=255) accGACGTCTACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCttgtt > 2:7479166/3‑150 (MQ=255) tAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAAt > 2:2291573/1‑150 (MQ=255) aGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAAtt < 1:2552032/150‑1 (MQ=255) aGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAAtt < 2:3900403/150‑1 (MQ=255) aGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAAtt < 2:7605212/150‑1 (MQ=255) aCGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGCCGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGc < 1:4432528/150‑1 (MQ=255) cGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCa < 2:5169269/150‑1 (MQ=255) gTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCACGGGTGGTCTTGTTGCGAAATTGCAt < 2:8275768/150‑1 (MQ=255) cAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTc > 1:1321649/1‑150 (MQ=255) cAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTc < 2:3567066/150‑1 (MQ=255) gTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTcgcg > 1:8467511/1‑150 (MQ=255) tCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCgg < 1:3008388/150‑1 (MQ=255) gggCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTc < 1:4944359/150‑1 (MQ=255) ggCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTcg < 1:221705/150‑1 (MQ=255) gCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTcgc < 1:4324398/150‑1 (MQ=255) ggCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAgg > 2:4484828/1‑150 (MQ=255) ggCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAgg < 2:1004243/150‑1 (MQ=255) gCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGt < 1:6320046/150‑1 (MQ=255) ttGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGttc < 1:4894616/150‑1 (MQ=255) ttGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGttc > 1:8170515/1‑150 (MQ=255) ttGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGttc < 1:4586207/150‑1 (MQ=255) gggCTCGGATTTGGCGCGGCGCACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGttctt < 2:6208503/150‑1 (MQ=255) gggATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGttctt < 1:7510389/150‑1 (MQ=255) gggATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGttctt < 2:4606319/150‑1 (MQ=255) ggATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTcttcacttc > 1:5742202/1‑150 (MQ=255) gATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTcttcacttca > 1:27464/1‑150 (MQ=255) tttGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTtcatc > 1:4747023/1‑150 (MQ=255) ttGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTtcatca < 2:3464461/150‑1 (MQ=255) tGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAg < 1:3956642/150‑1 (MQ=255) ggCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAgg > 2:4348335/1‑150 (MQ=255) gAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGt > 1:1745458/1‑150 (MQ=255) gAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGt > 1:6556598/1‑150 (MQ=255) cGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAgg < 2:5835921/150‑1 (MQ=255) gTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTg > 2:328151/1‑150 (MQ=255) tCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTgc > 2:2800504/1‑150 (MQ=255) cTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTgcg < 1:1171370/150‑1 (MQ=255) gATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATc > 1:3823325/1‑150 (MQ=255) gATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATc < 1:6773057/150‑1 (MQ=255) aTCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCg > 1:8559117/1‑150 (MQ=255) tCAGGTCCTCGACGAGGGCGTCGTTTGCGTCCAGTTGATAGGCCGTTATCAGGACTGCGCGGGTGGTCTTTTTGCGAAATTGCATGATGCAGACGCGGGATTCGCGCAGGTTCTTCACTACATCAGGGGAGCGGTAGGTTTGCGCATctc > 2:6070515/1‑148 (MQ=255) gTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTc > 2:6647364/1‑150 (MQ=255) gTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTc < 1:8086508/150‑1 (MQ=255) tCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCg > 1:5841602/1‑150 (MQ=255) ccatCGACGCCCGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCg > 2:6367729/4‑150 (MQ=255) catCGACGCCCGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGa > 2:7872711/3‑150 (MQ=255) catCGACGCCCGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGa > 2:8407167/3‑150 (MQ=255) tCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGTCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGaaa < 2:2078201/150‑1 (MQ=255) tCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGaaa < 2:713080/150‑1 (MQ=255) tCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGaaa > 1:6813342/1‑150 (MQ=255) tCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGaaa < 2:1204867/150‑1 (MQ=255) gcgGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGAAATGGcc < 1:3206315/150‑1 (MQ=255) gggCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGAAATGGCCgt > 2:6988279/1‑150 (MQ=255) gggCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGAAATGGCCgt < 1:6660619/150‑1 (MQ=255) gggCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGAAATGGCCgt > 1:8321382/1‑150 (MQ=255) | GATCTTTCTTGCCATGGTGGTTCTCCTGTTGTTCTTGTAATCCGCGGCTCAGGGGTAGGCGACGTAGACGTCGGTGAGCAGGTCGGCGGGCTGTGGCTTGGGATCGGATTTGGCGCGGCGAACGGCGTCTTCGATCAGGTCCTCGACGCGGGCGTCGATGGCGTCCAGTTGCTCGGCCGTGAGCAGGCCGGCGCGGGTGGTCTTGTTGCGAAATTGCATGAGGCAGTCGCGGGATTCGCGCAGGTTCTTCACTTCATCAGGGGCGCGGTAGGTTTGCGCATCGCCTTCGAAATGGCCGT > NC_002947/643994‑644292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |