| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 668,079 | T→G | 13.7% | intergenic (+40/+112) | yfhM → / ← PP_0571 | lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 668,079 | 0 | T | G | 13.7% | 518.9 / 21.6 | 237 | intergenic (+40/+112) | yfhM/PP_0571 | lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (56/138); new base G (34/4); total (90/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 241 total aligned reads displayed.
TGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCA > NC_002947/667930‑668228 | ccccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGC > 2:5680352‑M1/1‑150 (MQ=255) ccGGGCACCTACCGCGTGCCGCCGCCGCCGGTCGACTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGA < 1:5675961‑M1/150‑1 (MQ=255) ccGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGA < 2:4075375‑M1/150‑1 (MQ=255) ggCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAg < 1:2086792/150‑1 (MQ=255) ggCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAg < 1:6866641/150‑1 (MQ=255) ccTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGcc < 2:5360277/150‑1 (MQ=255) cTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGGTAGGGCCg > 1:3363275/1‑150 (MQ=255) tACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTGGCGATGGGGCCGc > 1:7251433/1‑150 (MQ=255) tACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAtagggctgc < 2:4612694‑M1/150‑10 (MQ=255) aCCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGGTAGGGCCGCa > 2:3251487/1‑150 (MQ=255) cgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc < 2:8787190/150‑1 (MQ=255) cgTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGc < 2:5750114/150‑1 (MQ=255) gTGCCGCCGCCGCAGGTCGAATCGAGGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGACAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCg < 2:7659876/150‑1 (MQ=255) gccgccgccGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGc < 1:3719032/150‑1 (MQ=255) ccgccgccgCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagcc < 2:4696948‑M1/150‑19 (MQ=255) ccgccgccgCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGcc < 2:2514227/150‑1 (MQ=255) cgccgccgcAGGTCGACTCGAGGTACCGGCCGAACCTGCAGGCCGTGGGCGCTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGccc < 2:5708047/150‑1 (MQ=255) gccgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGGGCGGCGCGGTCGGGCCGCAAAGCGGcccc > 1:8809914/1‑150 (MQ=255) ccgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGcccta < 1:386299/150‑3 (MQ=255) cgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCTTTGCGGccctat < 2:2481614/150‑4 (MQ=255) gcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCGACCAt > 2:6372640/1‑150 (MQ=255) aGGTCGAACCGATGTACCGGCCGAACCTGCAGGCCGTGGGCTATGGGCATGGGGAGTTGACGGTGAAAGCCCGATTGAGACCCGCTGTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTc < 1:7083518/150‑1 (MQ=38) gactCGATGTACCGGCCGACCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGCGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcg < 2:7104983/147‑1 (MQ=255) gAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCGCCAAGCGGCCCCGACAATTCAAgcg > 2:8521170/1‑150 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTTGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcgg < 1:8702533/150‑1 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGGGCGGTTGGGCCCCCAACCGGCCCCCCCCAATCAAgccg > 1:7469873/1‑148 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCGGGGCGGCGCGGTGGGGCGGCCGAGCGGCGCCGACCAttacaccgg > 1:2503843/1‑143 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcgg > 2:8205307/1‑150 (MQ=255) aTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGGTAGGGCCGCAAAGCGGCCCCGACCATTCAAgcggc > 2:848578/1‑150 (MQ=255) gATGTACGGGCCGACCCTGCCGGCGGTGGGCGATGGGCATGGGGTTATGACGGTGAAAGCCCGCTAGAGACCCGATCTACGCGTAACGTGTGGGAGGGGCCTTGCTTCGCTTTTGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGaa < 1:6932078/150‑1 (MQ=255) ttGTACCGGCCGAACCTGCAGGCGGTGGGCGTTGGGCATGGGTATATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAg < 1:1351867/149‑1 (MQ=38) gTACCGGCCGAACCTGCAGGCGGGGGGCGAGGGGCCTGGGGATATGCGGGTGACCGCCCGCTAGCGACCCGCTCTCCGCGGAAAGTGGGGGCGGGGCCTTGCGTCGCGATCGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCt < 1:6611502/150‑1 (MQ=255) gTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCt < 2:2985344/150‑1 (MQ=255) gTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCt < 2:7318515/150‑1 (MQ=255) gTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCt < 2:654187/150‑1 (MQ=255) gTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCt < 2:7892158/150‑1 (MQ=255) gaCCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTg < 2:5262133/149‑1 (MQ=255) aCCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGCGCGATAGGGCCGCCCAGCGGCCCCGACCAATCAAGCGGCGAAGCGGa > 2:5875168/1‑150 (MQ=255) aCCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCGGa > 2:452238/1‑150 (MQ=255) aCCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCCCAAAGCCGCCCCGACAATACAATCGgcggagcgga > 2:83580/1‑150 (MQ=255) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCCAAGCGGCCCCCACAATTCAAGCGGCGAAGCGGaa > 2:2207322/1‑150 (MQ=255) ggCCGAACCTGCTGGCCGTGGGCGTTGGGCATGGGGAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGTAATGTGTGGGTGCGGCCTTGCGTCGCTTTAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAg < 1:5183488/150‑1 (MQ=255) gaccgtGCTGGCGGTGGGCGTTGGGCAAGGGGAGATGAGGGTTAAAGCCCGCTCGAGACCCGCTCTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 1:5426650/145‑1 (MQ=37) gacccTGCAGGCCTTGGGCTTTGGGAAAGGGTTGATGACGGTTAAAGCCCTCTAGAGACCCGCTCTCCGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCTATTGGGCCCAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 1:7714657/147‑1 (MQ=37) aaCCTGCAGGCGGTGGGCGTTGGGAATGGGTATTTGACGTTTAAAGCCCGCTTGAGACCCGCTCTACGCGTAAAGTGTGGGAGCGGCGTTGCGTCGCGATTGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 1:6182187/150‑1 (MQ=255) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:1271207/150‑1 (MQ=255) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:1913650/150‑1 (MQ=255) ccTGCTGGCGGTGGGCGAGGGGCATGGGGAGTTGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGGGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgggg < 1:4480142/150‑1 (MQ=37) ccTGCTGGCCGTGGGCGTGGGGCATGGGGTGCTGACGGTGAAAGCCCGCTAGAGCCCCGCTCTAGGGGGAATGTGTGGGCGCGGCCTTGCGTCGCGATTGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgggg < 1:965880/150‑1 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACTGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCCGCGCGATAGGGCCGCAAAGCCGCACCGACAAATCAAGCGCCCAACCAGACAGACTGGGgcagca > 2:7452607/1‑149 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGGGCGGCGCGCTTGGGCCGCCAAGCGGCCCCGCCCCGTGACGCGGCGAAGCGGAAAGCCTGGGgcggct > 1:3617728/1‑150 (MQ=255) ccGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGGGCGGGGCGGTAGGGCCGCCCCGCGGCCCCGCCCAAAAAAGCCGCGCAGCGGCGAGCCGGGggcggcgggg > 1:2715387/1‑146 (MQ=255) cGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGc < 2:4968250/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:8618335/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGAAGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGAGTGGGAGCGGCCATGCCGCGCCATAGCGCCCCCCAGCCGCCCCCACAAATCAACCGGCGCACCGGCAACCCTGGGGCGGCtgtgaa > 2:3805193/1‑148 (MQ=255) gggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggc < 2:4264194‑M1/150‑66 (MQ=255) ggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggcc < 1:4078085‑M1/150‑67 (MQ=255) ggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc < 2:7058323/150‑1 (MQ=255) ggtggggCACGGGGTGATGACGTTGAAAGCCCGCTTGAGACCCGCTCTACGCGGAACGTGTGGGCGCGGCCTTGCGTCGCGATCGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCt < 1:2990447/146‑1 (MQ=255) gATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCACAGCAGcccca < 2:226726/150‑3 (MQ=255) tGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatc < 2:8751868‑M1/150‑72 (MQ=255) tGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggcagcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatc < 1:2758201‑M1/150‑72 (MQ=255) gggCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGCGGGTTAGGGCCGCAAAGCGGCCCCGTCAAAGGAAGCGGCGAAGGGGAAAGCCGGGGGCTGCTGTGGAGcccaggcg > 1:6464384/1‑145 (MQ=255) cAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCAGGCGTGGCGATAGGGCCGCCAAGCGGCCCCGACCATACAAGCGGCCAAGCGGTACGCCAGGGGCGGCGGTGCCGCCCAGGCGCGa > 1:1027646/1‑150 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCCTCGCGATAGGGCCGCCAAGCGGCCCCCACAAATCAAGCGGCGAACCGGAAAGCCTGGGGCTGCAGTGCAGCCCGGtcgcgac < 2:4440916‑M2/150‑8 (MQ=255) gggAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGCGGCGAACCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgca < 2:8424198‑M2/150‑11 (MQ=255) gttgaTGCCGTTCAAAGCCCGATATATCCCCGATATACGCGGAATGTGTGGTTGGGTCGTTGCTTCGCGATAGGGCCCCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCaa < 1:1608485/147‑1 (MQ=255) ggtgttgacggTTAAAGCCCGCTAGAGACCCGCTATACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaa > 1:8363029‑M2/6‑139 (MQ=255) gagaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaag < 1:8346003‑M1/150‑82 (MQ=255) gagaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaag > 2:2995081‑M2/1‑138 (MQ=255) gttgaGGGTCAACGCCCGCTATACACCGGCTCTACGGGTAACGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggc > 1:1751967‑M2/3‑136 (MQ=255) gACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGACAAATAAAGCGGCGAAGCTGAAAGCCAGGGGCTGCGGTGCAGCCCAGtcgcgacgccaggccgc < 2:2588190‑M2/150‑18 (MQ=255) gACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacccaaggccgc < 2:2588624‑M2/150‑18 (MQ=255) ggTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGGCCCGACAAATATAGCGGCGCAGCTGTAAGCCTGGGGCTGCTGTGCAGCCCGGtggcggcgcaaggccgctcc < 2:2567195‑M2/150‑21 (MQ=255) aGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggcc < 2:5246947‑M1/121‑67 (MQ=255) ttgagcCCCGCTCTCCGGGGACTGTGTGGGCGCGGCCTGGCGCCGCTATTGGGCCCCAACGCGGCCCCGACAATTCACGGGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGATCCCACAAAGACcgcg < 2:1704375/148‑1 (MQ=255) gagaCCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCgcgcc > 2:8062925/1‑149 (MQ=255) caCCCGCTCTCCGCGGACTGTGGGGGCGCGGCCTTGCGTCGCGATGGGGCCGAAACGCGGCCCCGACACTTCACGCGGCGACGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGTAGa < 2:8242546/149‑1 (MQ=25) aCCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGACAAATCAAGCGGCGGAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCAGTCGCGACGCAAGGCCGCTCCCCCAAAGACCgcgccgct > 2:3398330/1‑146 (MQ=37) tACGCGGATTGTGGGGGCGCGGCGTGGGGTCGCTATCGGGCCCCAAGGCGCCCCCGACAATTCACGCGGCGACGCTGAACGCGTGGGGCTGGGGTGCCGCCGTGCCGCGCGGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGAt < 2:2096383/150‑1 (MQ=255) cgcgGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCCGCCCCGACAAATCAAGCGGCCCAGCTGAAAGCCGGGGGCTGCGGGGCAGCCCAGTCGCGACGCAAGGCCGCGCCCACCAAGACCGCGCAGATCAGTGGATCa > 2:3982047/1‑150 (MQ=37) ttggtgggaGCGGCCTTGCGTCGCGActgggctgcccagcagccccaggctttcagcttcgccgctttaattgtcggggccgctgtgcggccctatcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggct < 2:2039686‑M1/147‑125 (MQ=255) gtgtGGGAGCGGGCTTGCGTCGCGCTAGGGCCGCAAAGCGGCCCCGACAATTAAAGCGGCGAAGCTGAAAGCCAGGGGCTGCTGTGGCGCCCTGTCGCGACGCAAGGCCGCTCCCCCAAAGACCGCGCACATCAGTGGATCACCCAGCtc > 2:4888678/1‑150 (MQ=37) tgtgGGAGCGGCCTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggcttt < 2:7855435‑M1/150‑127 (MQ=255) tgGGCGGGGCCTTGGGTCGCTTTCGGGCCGCAACGGGGCCCCGACAATTCACGCGGCCAAGCTGAAAGCCTGGGGCTGCTTTGCAGCCCTTTGGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCtcatc < 2:1359164/150‑1 (MQ=25) ggcgcggCCTGGCGTCGCGAcagggctgcaaagccgcccccggcttacagcttcgccgctggaattgtcggggccgctttgcggccctatcgcgacgcacggccgctcccacactttccgcgtagagcgggtctctagcgggctttcacc < 2:5209047‑M1/147‑131 (MQ=255) gcgCGGCCTTGCGCCGCTATCGGGCCGAAACGCGGCCCCGACAATTAACGCGGCGACGCTGAACGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGAAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAcc < 2:4346061/148‑1 (MQ=37) cgcggcgTTGCGTCGCGTACGGCCCGAACCCCGGCCCCGACAATCCCACCGCGGCCGCTGACACCCGGGGCCGGCGGTCCCGCCCGGTCCCCACGCACGCCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAccc < 2:8284486/149‑1 (MQ=255) aGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAccc > 2:8412343/1‑150 (MQ=255) cGGCCTTGCGTCGCGActgggctgcacagcagcccccggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcacggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtca < 2:4509690‑M1/150‑135 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatc < 1:6001027‑M2/150‑68 (MQ=255) ccTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgcacccacactttccgcgtagagcgggtgtatagcgggctttcaacgtcatct > 1:2691811‑M1/1‑13 (MQ=255) ccTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggcccgatcgcgacgcaaggcccctcccacactttccgcggagagcgggtctctagcgggctttcaccggcctca > 1:946702‑M1/1‑13 (MQ=255) ccTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctgtgcggccctatcgcgacgcaaggccgctcccacactgtccgcgtagagcgggtctctagcgggctttcaccgtcatct > 2:3507025‑M1/1‑13 (MQ=255) cTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctc > 1:1399461‑M1/1‑12 (MQ=255) cTTGCGTCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgctcccacactttacgcgtagagcgggtctctagcgggctttcacagtcatctc > 1:3594363‑M1/1‑12 (MQ=255) gTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctcccctt < 1:2219150‑M2/150‑75 (MQ=255) gTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGc > 1:5825597/1‑150 (MQ=255) gTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGc > 1:5825311/1‑150 (MQ=255) tCGCGAcagggctgcacagcagccccaggctttcagcttcgccgcttgaattgtcggggccgctttgcggccctatcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttg > 2:8052571‑M1/1‑6 (MQ=255) | TGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCA > NC_002947/667930‑668228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |