| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 668,094 | A→C | 8.0% | intergenic (+55/+97) | yfhM → / ← PP_0571 | lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 668,094 | 0 | A | C | 8.0% | 562.8 / 5.1 | 215 | intergenic (+55/+97) | yfhM/PP_0571 | lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (64/116); new base C (19/3); total (89/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.00e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 218 total aligned reads displayed.
ACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTC > NC_002947/667945‑668243 | gccgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGcccc < 2:1795241/150‑1 (MQ=255) cgccgcAGGTCGAATCGTTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCATGGGGAGATGACGGTGAAAGCCCGCTATAGACCCGCTCTACGCGT‑AAAGTGTGGGTGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGa < 1:6893730/150‑1 (MQ=39) cgccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATGGGGCCGCTTTGCGGccctat < 2:1281174/150‑4 (MQ=255) gccgcAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGAGAGGGCCGCTTTGCGGccctatc < 2:1206498/150‑5 (MQ=255) aGGTCGAACCGATGTACCGGCCGAACCTGCAGGCCGTGGGCTATGGGCATGGGGAGTTGACGGTGAAAGCCCGATTGAGACCCGCTGTACGCGG‑AATGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTc < 1:7083518/150‑1 (MQ=38) cGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgc < 2:5978779/150‑1 (MQ=255) gactCGATGTACCGGCCGACCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGCGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcg < 2:7104983/147‑1 (MQ=255) gAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGTGCGGCGCGCGAGGGCCGCACAGCGGCCCCCACCCATCAAgcg > 2:3100447/1‑150 (MQ=255) aaTCGATGTACCGGCCGAACCTGCTGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAGGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGAAAAGCGGCCCCGACAATTCAAgcgg < 2:2244850/150‑1 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTTGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcgg < 1:8702533/150‑1 (MQ=255) aaTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCGGGGCGGCGCGGTGGGGCGGCCGAGCGGCGCCGACCAttacaccgg > 1:2503843/1‑143 (MQ=255) aTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGGCGTGCGGGGCGCTGGGGCCGCCAACCGGCCCCCCCAAAGCAAacggc > 1:3864077/1‑150 (MQ=255) aTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAgcggc < 1:6523997/150‑1 (MQ=255) aTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGGCGCGGGAGGGCCGCAAAGCGGCCCCGACAAATAAAgcggc > 2:848416/1‑150 (MQ=255) aTGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCCAAGCGGCCCCGACAAGTCCAGCGGCGAAg > 2:8142396/1‑150 (MQ=255) gTACCGGCCGAACCTGCAGGCGGGGGGCGAGGGGCCTGGGGATATGCGGGTGACCGCCCGCTAGCGACCCGCTCTCCGCGG‑AAAGTGGGGGCGGGGCCTTGCGTCGCGATCGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCt < 1:6611502/150‑1 (MQ=255) gTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCt < 2:7892158/150‑1 (MQ=255) gTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCt < 2:7318515/150‑1 (MQ=255) gTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCt < 2:654187/150‑1 (MQ=255) tACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGCAGCTg > 2:3343192/1‑150 (MQ=255) tACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTg < 2:5262072/150‑1 (MQ=255) aCCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCCCAAAGCCGCCCCGACAATACAATCGgcggagcgga > 2:83580/1‑150 (MQ=255) ccGGCCGAACCTGCAGGCCGTGGGCGTTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGATACCCGCTCTACGCGGAAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGa < 2:2815495/150‑1 (MQ=255) cGGCCGAACCTGCTGGCCGTGGGCGATGGGCAAGGGGAGTTGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCGT‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGaaa < 1:5537959/150‑1 (MQ=255) cGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGaaa < 2:7815068/150‑1 (MQ=255) ggCCGAACCTGCTGGCCGTGGGCGTTGGGCATGGGGAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGT‑AATGTGTGGGTGCGGCCTTGCGTCGCTTTAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAg < 1:5183488/150‑1 (MQ=255) gCCGACCCTGCAGGCGGGGGGGGTTGGGCATGGGGAGTTGACGGTGAAAGCCCGCTCGCGACCCGCTCTAGGGGG‑AATGTGGGGGTGGGGCCTTGCGGCGGTATCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGc < 1:2989842/150‑1 (MQ=255) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGTGCGTCGCGGTAGGGCCGCCAAGCGGCCCCGACAATTGAAGCGGCGTCGCGGAAAGccgg > 1:1370219/1‑148 (MQ=38) ccggccggCCGTGGGCGTTGGGCATGGGGAGAGGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGG‑AATGTGTGGGCGCGGCCTTGCGTCGCGATAGGGCCGCAACGGGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgggg < 1:1497149/144‑1 (MQ=37) ccTGCTGGCGGTGGGCGAGGGGCATGGGGAGTTGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGGGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgggg < 1:4480142/150‑1 (MQ=37) aGGCGGTGGGCGAGGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgct < 2:2185762/150‑1 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACTGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCCGCGCGATAGGGCCGCAAAGCCGCACCGACAAATCAAGCGCCCAACCAGACAGACTGGGgcagca > 2:7452607/1‑149 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGGGCGGCGCGCTTGGGCCGCCAAGCGGCCCCGCCCCGTGACGCGGCGAAGCGGAAAGCCTGGGgcggct > 1:3617728/1‑150 (MQ=255) gCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGTGCGTCGCGGTATGGGCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCGGGGGCGGCggt > 2:8224934/1‑150 (MQ=255) ccGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGGCGGGCGGGGCGGTAGGGCCGCCCCGCGGCCCCGCCCAAAAAAGCCGCGCAGCGGCGAGCCGGGggcggcgggg > 1:2715387/1‑146 (MQ=255) ccGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGGCGCGGTAGGGCCGCAAAGCGGCCCCGCCAAATCAAGCGGCGCAGCGGTAAGCCGGGGGCTGCggtg > 2:2363085/1‑150 (MQ=255) ccGTGGGCGATGGCAAAGGGTAGATGACGGTTAAACCCCGCTATACACCCCCTCTACGCGG‑AAAGTGTGGGAGCGGCATTGCGTCGCGATAGGCCCCAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:901405/150‑1 (MQ=255) cGTGGGCGATGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGc < 2:573335/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:8618762/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCACAAATCAAGCCGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa > 2:8515696/1‑150 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGAAGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGAGTGGGAGCGGCCATGCCGCGCCATAGCGCCCCCCAGCCGCCCCCACAAATCAACCGGCGCACCGGCAACCCTGGGGCGGCtgtgaa > 2:3805193/1‑148 (MQ=255) gggggttGGGCATGGGGAGATGCCGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGT‑AATGTGTGGGTGCGGCCTTGCGTCGCTATTGGGCCCCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGc < 1:3690017/144‑1 (MQ=255) gggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCAG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGc < 1:3557094/150‑1 (MQ=255) ggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc < 2:7058323/150‑1 (MQ=255) ggCGAGGGGCACGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc < 2:4800484/150‑1 (MQ=255) cgtggggCTAGGGGCGAGTAGGGTGAACGCCCGCTCCCGCCCCGCTCTACGCGT‑AACGTGTGGGTGCGGCCTTGCGTCGCGATTGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCt < 1:275128/146‑1 (MQ=255) cgcggggCACGGGGAGATGCCGGTGAACGCCCGCTCGAGCCCCGCTCTACGCGG‑AACGGGGGGGAGCGGCCTGGCGTCGCGATCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCt < 1:2540664/146‑1 (MQ=255) cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGT‑AAAGTGTGGGAGCGGCCTTGCGTCGCTATAGGCCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCt < 1:116934/150‑1 (MQ=255) cGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGTGCGTCGCGCAAGGGCCGCAAAGCGGCCCCGACAAAAAAACCGGCGAAGCCGAAACCCAGGCGCTGCTGAGCAGacca > 1:7275898/1‑149 (MQ=37) cAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGGCAGGCGTGGCGATAGGGCCGCCAAGCGGCCCCGACCATACAAGCGGCCAAGCGGTACGCCAGGGGCGGCGGTGCCGCCCAGGCGCGa > 1:1027646/1‑150 (MQ=255) cAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcga > 2:5360253‑M2/1‑144 (MQ=255) cAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcga > 2:8052571‑M2/1‑144 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCCTCGCGATAGGGCCGCCAAGCGGCCCCCACAAATCAAGCGGCGAACCGGAAAGCCTGGGGCTGCAGTGCAGCCCGGtcgcgac < 2:4440916‑M2/150‑8 (MQ=255) agaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑ACAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCACAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaagg > 2:3507025‑M2/1‑137 (MQ=255) gttgaGGGTCAACGCCCGCTATACACCGGCTCTACGGGT‑AACGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggc > 1:1751967‑M2/3‑136 (MQ=255) gACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGACAAATAAAGCGGCGAAGCTGAAAGCCAGGGGCTGCGGTGCAGCCCAGtcgcgacgccaggccgc < 2:2588190‑M2/150‑18 (MQ=255) ggTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGCGCGGCCGTGCGGCGCGCTAGGGCCGCACAGCGGCCCCGACACGGCCCGCGGCGCAGCGGCAAGCCGGGGGCGGCGGGGCCGCCCTGGCGCGGCGCCCGGCCGCGcc > 2:5098460/1‑150 (MQ=255) ggTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGGCCCGACAAATATAGCGGCGCAGCTGTAAGCCTGGGGCTGCTGTGCAGCCCGGtggcggcgcaaggccgctcc < 2:2567195‑M2/150‑21 (MQ=255) ggTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCCAGCGGCGAAGCTGTAAGCCGGGGGCGGCTTTGCAGCCCTGtcgcgacgccaggccgcgcc < 2:5209047‑M2/150‑21 (MQ=255) aGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTAAAGCGGCGACGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCCAGGCCGCTCCCACaaa > 2:2039655/1‑150 (MQ=255) cccGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAGCGGCGAAGCGGAAAGCCAGGGGCTGCTGGGCAGCCCGGTCGCGCCGCAAGGCCGCGCCCACCAAGa > 2:8624150/1‑150 (MQ=37) cTAGAGACCCGCTCTCCGGGT‑AATGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGAAAATTCACGCGGCGAAGCTGAACGCCTGGGGCTGCTGTGCAGCCCTGTGGCGCCGCAAGGCCGCTCCCACAAAGACcgc < 2:5831604/150‑1 (MQ=25) gagaCCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCACAAAAAAAGCGGCGAAGCGGGAAGCCAGGGGCTGCGGTGCAGCCCAGTCGCGACGCAAGGCCGCGCCCACAAACACcgcccc > 2:2923815/1‑147 (MQ=25) caCCCGCTCTCCGCGG‑ACTGTGGGGGCGCGGCCTTGCGTCGCGATGGGGCCGAAACGCGGCCCCGACACTTCACGCGGCGACGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGTAGa < 2:8242546/149‑1 (MQ=25) aCCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGACAAATCAAGCGGCGGAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCAGTCGCGACGCAAGGCCGCTCCCCCAAAGACCgcgccgct > 2:3398330/1‑146 (MQ=37) tACGCGG‑ATTGTGGGGGCGCGGCGTGGGGTCGCTATCGGGCCCCAAGGCGCCCCCGACAATTCACGCGGCGACGCTGAACGCGTGGGGCTGGGGTGCCGCCGTGCCGCGCGGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGAt < 2:2096383/150‑1 (MQ=255) cgcgG‑AAAGTGTGGGAGCGGCCTTGCCTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAACCGGCCAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCCAGGCCCCTCCCACCAAGACCGCGCCGATCAGTGGATCa > 2:8727765/1‑150 (MQ=37) cgcgG‑AAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCCGCCCCGACAAATCAAGCGGCCCAGCTGAAAGCCGGGGGCTGCGGGGCAGCCCAGTCGCGACGCAAGGCCGCGCCCACCAAGACCGCGCAGATCAGTGGATCa > 2:3982047/1‑150 (MQ=37) cgG‑AACGTGGGGGTGCGGCCTTGCGTCGCGATCGGGCCGCAACGCGGCCCCGACAATTCACGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCAcc < 2:7935680/150‑1 (MQ=37) ttgtgGGTGCGCCCTTGCGAGCCTATTGGCCCCCAACGCGCCCCCCACAATACAAGCGGCGAAGCTTAAAGCCTGGGGCTGCTGTGCCGCCCTGTCGCCACGAACGCCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCtc < 2:8293367/149‑1 (MQ=255) tgtgGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCCACAAATCAAGCGGCCGAGCTGAAAGCCTGGGGCTGCTGTGCCGCCCATTAGCCTCCCCAGGCCGCGCCCCCAAAGACCCCGCCGGTCACTGGATCACCCAGCtca > 2:2491074/1‑150 (MQ=21) gtgggtggGGGCTTGGGTCGCGATCGGGCCGCAACGGGCCCCCTACAATTCACGCGGCGACGCTTAACGGGTGGGGCTGCTGTGCCGCCCTGCCGCGCCGCAAGCCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCtcat < 2:4522281/150‑1 (MQ=255) tgGGCGGGGCCTTGGGTCGCTTTCGGGCCGCAACGGGGCCCCGACAATTCACGCGGCCAAGCTGAAAGCCTGGGGCTGCTTTGCAGCCCTTTGGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCtcatc < 2:1359164/150‑1 (MQ=25) ggcgCGGCCTGGCGTGGCGTTCGGGCCGCAACGCGGCCCCGAAAATCCACGCGGCGACGCTGAACGCGTGGGGCTGCTGGGCCGCCGTGTCGCGACGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAc < 2:4580374/147‑1 (MQ=255) gcgCGGCCTTGCGCCGCTATCGGGCCGAAACGCGGCCCCGACAATTAACGCGGCGACGCTGAACGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGAAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAcc < 2:4346061/148‑1 (MQ=37) gAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc < 2:5696415/85‑1 (MQ=255) tgCGGCCTTGGGCCGCGATTGGGCCGCAACGCGGCCCCTAAAATACACGCGGCGAAGCTCAAAGCCTGGGGCTGCTGTGCCCCCCTGTCGCGACGCACGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAccc < 2:8284482/149‑1 (MQ=255) aGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCAccc > 2:8412343/1‑150 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatc < 1:6001027‑M2/150‑68 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 1:948292/1‑150 (MQ=255) cTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctc < 1:8346003‑M2/150‑70 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 1:8481763/1‑150 (MQ=255) gCGTCGCTATAGGCCCGCAAAGCGCCCCCCAAAATACAACCGGCTAAGCTGAAAGCCTGGGCCTGCTGTGCACCCCTGTCCCGACGAAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCa < 2:4925876/150‑1 (MQ=255) gTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGc > 1:5825507/1‑150 (MQ=255) tCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttg < 1:4329158‑M2/150‑76 (MQ=255) gATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccag > 1:5807289/1‑150 (MQ=255) aTAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagc > 1:3770202/1‑150 (MQ=255) ggggCCGCTTTGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagcca > 2:7413528/2‑150 (MQ=255) ggggCCGCTTTGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagcca > 2:6120325/2‑150 (MQ=255) ggggCCGCTTTGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagcca > 1:6206114/2‑150 (MQ=255) ggggCCGCTTTGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagcca > 2:1695873/2‑150 (MQ=255) gggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagccag > 1:7981563/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgcccatcgcc < 1:6164513‑M2/150‑85 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggct > 1:5246947‑M2/1‑66 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcacacactttccgcgtagagcgggtctctagagggctttcaccgtcatctccccttgcccatcgcc < 2:8784541‑M2/150‑85 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGtcgcgacgcaaggccgctcccacactttccgcgtagagcgggtctctagcgggctttcaccgtcatctccccttgcccatcgccc < 2:4264194‑M2/150‑86 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgat > 1:2122464/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGAGCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgat > 1:3224090/1‑150 (MQ=255) ccGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatg > 1:7526909/1‑150 (MQ=255) aaaGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTc > 1:2964616/1‑150 (MQ=255) | ACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGG‑AAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTC > NC_002947/667945‑668243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |