| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 706,878 | T→G | 6.1% | intergenic (+51/+195) | PP_0599 → / ← rpsT | paraquat‑inducible protein B/30S ribosomal protein S20 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 706,878 | 0 | T | G | 6.1% | 1867.7 / 14.3 | 621 | intergenic (+51/+195) | PP_0599/rpsT | paraquat‑inducible protein B/30S ribosomal protein S20 |
| Reads supporting (aligned to +/- strand): ref base T (188/372); new base G (48/7); total (241/380) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.34e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 637 total aligned reads displayed.
TGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGC > NC_002947/706730‑707027 | gTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCGTGCg > 2:3532305/1‑150 (MQ=255) aCCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTcg < 2:1482909/150‑1 (MQ=255) cccGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTcgc < 1:8012955/150‑1 (MQ=255) gcgGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAgg > 2:2333275/1‑150 (MQ=255) ccGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGGCGCGAAAGGGgcg > 2:7238621/1‑150 (MQ=255) gcagACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAg < 1:1005624/150‑1 (MQ=255) gACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGTAAGGGGCGCGTAGCgg > 2:4726059/1‑150 (MQ=255) gACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCgg < 2:5795035/150‑1 (MQ=255) aCCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGc < 1:1207917/150‑1 (MQ=255) cTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGccc > 2:3364621/1‑150 (MQ=255) cTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGccc > 2:2829002/1‑150 (MQ=255) cTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGccc < 2:2028208/150‑1 (MQ=255) cTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGccc < 1:7256934/150‑1 (MQ=255) cTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGGAGCGGccc > 2:3331070/1‑150 (MQ=255) cTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGGAGCGGccc > 1:7800083/1‑150 (MQ=255) cTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCCCCTCGCGGccc > 2:5410766/1‑150 (MQ=255) tttGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGcccc > 2:2937743/1‑150 (MQ=255) tttGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGcccc > 2:4836880/1‑150 (MQ=255) ccTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCgg < 2:7676516/150‑1 (MQ=255) ttGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGGCGTGGGGCGCGGAAGGGGGGCGGAGCGGCCCCGCgggc > 1:287596/1‑148 (MQ=255) ttGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCGTGCGGCGCGAAAGGGGGGCGTAGCGGCCCCGCgggc > 1:2467165/1‑148 (MQ=255) ttGTACGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGtc > 2:6120797/1‑150 (MQ=255) tGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGtct < 1:4272028/150‑1 (MQ=255) ttCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGGGCAAGGGGGGCGGAGCGGCCCCGCgggcggg > 1:5983277/1‑145 (MQ=38) ttCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCa > 2:7901991/1‑150 (MQ=255) cGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAgc < 1:6670908/150‑1 (MQ=255) cGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAgc < 1:8638848/150‑1 (MQ=255) cGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATAGCCAAGTGATGTAAAACTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCCCAAGTGGCGCGGAGCGCGCCCTCGGGGTCAgc > 1:7578838/1‑150 (MQ=255) aaGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAg < 1:3925382/150‑1 (MQ=255) ccGAGGAGGAAGGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAACGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAg < 2:8530886/150‑1 (MQ=255) cGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGt < 1:316167/150‑1 (MQ=255) aGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTga < 2:6648486/150‑1 (MQ=255) gATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGTGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTgaga > 2:2685761/1‑150 (MQ=255) tGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGAtt < 2:416450/150‑1 (MQ=255) aaTGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCGGTGCGTGGCGAAAGGGGGGGGGGGGGGCCCCTCCGTCTCAGCGCAGAAAGTGTGAtttg > 1:3788773/1‑148 (MQ=255) ggCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCgg < 2:5032751/150‑1 (MQ=255) gCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCggg < 2:6448759/150‑1 (MQ=255) cTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGGCGTGCGGCGCGCAAGGGGCGCGGGGCGGCCCCCCGGGCGCCGCGCCGCAAGTGAGGTTGGCgggg > 1:1649932/1‑150 (MQ=255) cTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCgggg < 2:5937261/150‑1 (MQ=255) tGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCGTGCGTCGCGGAAGGGGCGCGGAGCGGCCCCCCGGGCGCCGCGCAGCAAGGGAGATTGCGGGGGCGGccc > 1:8548667/1‑150 (MQ=37) gggCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGcccc < 1:4936772/150‑1 (MQ=255) cACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCa < 2:6962481/150‑1 (MQ=255) ttCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCAGGGCTGCGGGGCAGccccggca < 1:1513610/150‑6 (MQ=38) tCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATcgc < 1:8331230/150‑1 (MQ=255) tCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCGTGCGGGGCCCAAGGGGCGGGGAGCCGCCCCCCCGGGACAGCCCCGAAAATGGGGTTGGCGGGGCTGGCCCCCCCCCCTATccc > 1:5424496/1‑148 (MQ=255) aGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCGTGCGGCGCGGAAGGGGCGCGGAGCGGCCCCGCCGTCTGCGCGCAGAAAGGGAGATTTCCCGGGCGGCCCCCCAGCCCGAGCGCGa > 1:6844576/1‑150 (MQ=25) gATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGac < 2:8214613/150‑1 (MQ=255) tCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACAc > 1:3345381‑M2/1‑149 (MQ=255) gCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACAcaa > 1:4073284‑M2/1‑147 (MQ=255) gCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTCTGTGGGAGCGGCCTTGtgtcgcgatagggctgcggggcagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaa < 2:4132439‑M1/150‑89 (MQ=255) aaGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGGCGTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCGCGGTCGCCGCGCAGAAAGTGCGATTGCCGGGGCTGCCCCGCAGCCCAATCGCCACCcaacgc < 2:3929515‑M2/150‑7 (MQ=255) aaGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGa < 1:6579483/142‑1 (MQ=255) aGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGtgtcgcgatagggctgcggggcagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaaggcc < 2:838300‑M1/150‑93 (MQ=255) aGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCGTGCGTCGCGAAAGGGGCGCGTCGCGGCCCCGCGGTCGCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCCATCGCGACAcaacgcc < 1:5036319‑M2/150‑8 (MQ=255) gATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACAcaaggccgct > 2:8434025‑M2/1‑140 (MQ=255) tAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAATGTGAGATTGCCGGGGCTGCCCCTCAGCCCTATCGCGACAcaaggccgctccca > 1:7389879‑M2/1‑136 (MQ=255) aaaaGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTGGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGACAGTGTGGGTGGCGGGGGTGGCCCGCAGCCCGATGGCGACCcatggccgcgccccc < 1:6511611‑M2/150‑16 (MQ=255) aaaaGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACAcaaggccgctcccac > 2:6173251‑M2/1‑135 (MQ=255) aaaaGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCGTGCGTCGCGAAAGGGGCGCGGAGCGGCCCCACGGTCGCAGCGCCGAAAGGGAGAGTGCCGGGGCTGCCCCGCAGCCCGATCGCGACAcaaggccgctcccac < 2:2445972‑M2/150‑16 (MQ=255) tAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATc < 1:1955347/150‑1 (MQ=255) gggCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGa < 2:2111645/150‑1 (MQ=255) gggCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGa < 1:3468142/150‑1 (MQ=255) gggCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGa < 1:8749258/150‑1 (MQ=255) gccgccAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGt < 1:6315875/150‑1 (MQ=255) gccgccAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCCTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCCGTCACAGCGGCGAAAGGGGGGATGCCGGGGCGGCCCCCCAGCCCTATCGCGAAACAACGCCGCACCCCCAGAACGAGt > 2:400633/1‑150 (MQ=25) gccAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTccc < 2:8075915/150‑1 (MQ=255) gccAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCCCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTccc > 2:3841535/1‑150 (MQ=255) gcgcGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATg < 1:4507817/150‑1 (MQ=255) cgcgGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGAGTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATgg < 1:8166953/150‑1 (MQ=255) cgGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGaa < 2:8803730/150‑1 (MQ=255) cccTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGCAcgg > 2:7089150/1‑148 (MQ=255) ccTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTgg < 2:8601564/150‑1 (MQ=255) cTGCTTTTTTGTGGGAGCGGCCTAGCCTCGCGAAAGGGGCGCGGAGCGGCCCCTCGGTCGCAGCGCAGAAAGTGAGATTTCCGGGGCTGCCCCCCAGCCCGATCGCGACACAAGGCCGCGCCCACAAAACCAGTCCCGCATGGAACgggg > 2:3011807/1‑150 (MQ=25) ttttttGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCg > 2:1334764/1‑150 (MQ=255) tttttGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGc < 2:6813401/150‑1 (MQ=255) tttttGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGc < 2:960624/150‑1 (MQ=255) ttttGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGTGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGCTTGCCGGGGCTGCCCCGCAGCCCCCTCGCGACCCAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCa > 2:5235567/1‑150 (MQ=38) tttGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCaa < 1:2157752/150‑1 (MQ=255) tgtgtgGGAGCGGCCTGGCGTCGCGCAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCaa < 2:1226699/148‑1 (MQ=255) gtgGGCGCGGCCTTGtgtcgcgattgggctggggggcagccccggcattctcactttctgcgctgagacggaggggccgctacgcgcccctttcgcgacgcaaggccgctcccacaaaaaagcagggccgcgcttggcggccctactttt < 2:1844169‑M1/150‑136 (MQ=255) gtgGGAGCGGCCTTGtgtcgcgataggggtgcggggcagccccgggaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaaggcgggtcccacaaaaaagcagggccgcgcttggcggccctactttt > 2:1112457‑M1/1‑15 (MQ=255) tgGGAGCGGCCTTGtgtcgcgatagggctgcggggcagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaaggccgctcccacaaaaaagcagggccgcgcttggcggccctactttta > 2:7420129‑M1/1‑14 (MQ=255) tgGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCAt < 1:5518456/150‑1 (MQ=255) gggAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACAcaaggccgctcccacaaaaaagcagggccgcgcttggcggccctccttttac < 2:7510466‑M2/150‑53 (MQ=255) ggAGCGGCCTTGtgtcgcgatagggctgcggggcagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaaggccgctcccacaaaaaagcagggccgcgcttggcggccctacttttaca > 1:2312505‑M1/1‑12 (MQ=255) ggAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGCCACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATaa < 2:5109945/150‑1 (MQ=255) ggAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCGATAGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATaa > 2:3638038/1‑150 (MQ=255) gAGCGGCCTTGtgtcgcgatcgggctgcggggcagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaaggccgctcccacaaaaaagtagggccgccaagcgcggccctgcttttttgt < 2:216623‑M1/150‑140 (MQ=255) aGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAAt > 1:6141745/1‑150 (MQ=255) ggCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAg > 1:358290/1‑50 (MQ=255) gCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCa < 2:4397596/150‑1 (MQ=255) gCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCa < 1:4726059/150‑1 (MQ=255) ccTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCACATGGAACTGGGCCCGCAAGCAGAAATCGCAg > 1:6952897/1‑150 (MQ=255) cTTGtgtcgcgatagggctgcggggcagccccggcaatcttactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaaggccgctcccacaaaaaagcagggccgcgcttggcggccctacttttacatcacttgg > 2:7128637‑M1/1‑4 (MQ=255) cTTGtgtcgcgatagggctgcggggcagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaaggccgctcccacaaaaaagcagggccgcgcttggcggccctacttttacatcacttgg > 2:5722712‑M1/1‑4 (MQ=255) cTTGtgtcgcgatagggctgcggggcagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaaggccgctcccacaaaaaagcagggccgcgcttggcggccctacttttacatcacttgg > 2:5253597‑M1/1‑4 (MQ=255) cTTGtgtcgcgatagggctgcggggcagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaaggccgctcccacaaaaaagcagggccgcgcttggcggccctacttttacatcacttgg > 2:4292017‑M1/1‑4 (MQ=255) cTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAgg < 1:7901991/150‑1 (MQ=255) ttGtgtcgcgatagggctgcggggtagccccggcaatctcactttctgcgctgagaccgaggggccgctacgcgcccctttcgcgacgcaaggccgctcccacaaaaaagcagggccgcgcttggcggccctacttttacatcacttggc > 1:2796486‑M1/1‑3 (MQ=255) ttGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGc > 1:5734613/1‑150 (MQ=255) | TGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGC > NC_002947/706730‑707027 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |