| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 718,462 | A→C | 10.8% | intergenic (+29/+48) | thiO → / ← PP_0613 | FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 718,462 | 0 | A | C | 10.8% | 889.8 / 21.5 | 386 | intergenic (+29/+48) | thiO/PP_0613 | FAD‑dependent glycine/D‑amino acid oxidase/amidase family protein |
| Reads supporting (aligned to +/- strand): ref base A (150/166); new base C (2/50); total (159/227) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.12e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 394 total aligned reads displayed.
GCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGCCACCAC > NC_002947/718313‑718611 | gCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTa < 2:3231038/150‑1 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTAc < 1:4473749/150‑1 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTAc < 1:5934230/150‑1 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTAc < 1:7153164/150‑1 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTAc < 1:8150718/150‑1 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTAc < 1:3264658/150‑1 (MQ=255) cATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTAc < 2:907101/150‑1 (MQ=255) cATGATCGCACTGGGCTGGGGCGGGCGCCGGCGTCGTGCCAGCTGTTTACCGATTTGCGGACAGGGGCCGCGCCGATTCTCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTAc < 2:8121778/150‑1 (MQ=255) aTTACCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTAcg > 1:5757235/1‑150 (MQ=255) aTCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGa < 2:3433909/150‑1 (MQ=255) aTCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGa < 2:5859890/150‑1 (MQ=255) tCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCGCCTACGCGAg > 2:4627466/1‑150 (MQ=255) cAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑gg < 1:1366840/150‑1 (MQ=255) cAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAACCGCTCCAACGCGAGC‑gg > 2:7372017/1‑150 (MQ=255) aaTGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAACCCCACCAACGCGAGC‑ggg > 2:3671532/1‑150 (MQ=255) aTGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGt < 1:1156164/150‑1 (MQ=255) aTGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGt < 1:7247069/150‑1 (MQ=255) aTGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGt < 2:2469874/150‑1 (MQ=255) ggCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGCGGCCCT‑TTCGCGGGTAAACCCGCTCGCGTAGGAGC‑GGGTTTAc < 1:3371058/150‑1 (MQ=37) gCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCGCGTAGGAGC‑GGGTTTAc < 1:7628726/150‑1 (MQ=39) tGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTAccc < 2:6456286/150‑1 (MQ=255) tGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCGACGCGAGC‑GGGTTTAccc > 1:5034165/1‑150 (MQ=255) gTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCcgc > 2:7711279/1‑150 (MQ=255) gcgcCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGTTTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCCCTCCTACGCGAGC‑GGGGTTACCCCCGGAAgg > 2:5413604/1‑150 (MQ=255) gcgcCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAGACCCGCTCGCGTAGGAGC‑GGGTTTACCCGCGaaga < 2:4110647/149‑3 (MQ=38) gcgcCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGGAAAACCCCACCTACCCGAGC‑GGGGTTACCcccgccagg > 1:8283804/1‑145 (MQ=255) gcCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAACCCCACCAACGCGAGC‑GGGGTTAACCGCGCAAGGGc > 2:1079094/1‑150 (MQ=255) ccGGCTTCGTGCCAGCTGTTTACCTATTTGCTGACTGGGGCCGTGCCTATTATCGACCGGGCGCCGTATGCGCCTGAAGGGCTTTTGGGCTGAGGACCTCTTCGCGTGTAAACCGGCTCCTACGCGCGG‑GGTTTTACCCGCGAAAGGGcc < 2:2343479/150‑1 (MQ=255) cGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCg < 2:6575287/150‑1 (MQ=255) ggCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCCCACCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGc > 2:8520891/1‑150 (MQ=255) ttCGTGCCCGCTGTTTACCGATTTGCTGACCGGGGCCGAGCCGATTATCGACCCGGCGCCGTAGGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGGGGGTAAACCCGCGCCTCCGCGAGC‑GGTTTTACCCGCGAAAGGGCCGCAgc < 2:2525511/150‑2 (MQ=255) ttCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAACCCCACCAAACCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGa > 2:3980444/1‑150 (MQ=255) ttCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGGAAACCCGCGCCGACGCGAGC‑GGGGTTACCCGCGCAAGGGCCGCAGa > 2:6127988/1‑150 (MQ=255) tCGTGCAAGCTATTTACCGTTTGGCTGACCGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTCCGCGAGC‑GGTTTTACCCGCGAAAGGGCCGCAGaa < 1:8712195/150‑1 (MQ=255) ccGTCCCAGCTTTTTACCGATTGGCTGACCGGCGCCGAGCCGATAAACGACCCGGCGCCGTATGCGCCAGAAGGGCGTTGGGCCTCAGCACCTCTTCGCGGGTAAACCCGCACCAACCCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGaa < 2:5923279/149‑1 (MQ=255) tGCCTGCTGTTTACCGTTTGGCTGACTGGGGCCGAGCCTATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTCCGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGcc < 2:6974002/150‑1 (MQ=39) ccAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCaa > 2:7300334/1‑150 (MQ=255) aGCTGTTTACCGATTGGCTGACCGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATa < 2:7997032/150‑1 (MQ=255) gTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTTTGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGATTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGa < 1:2992153/150‑1 (MQ=255) ttACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCAGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGAtt > 2:2825575/1‑150 (MQ=255) aCCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCCCACCGGCGCGCGC‑GGGTTTTCCCGCCAGAGGGGCGCCGAACCCAAGACAGAtttg > 1:1990636/1‑149 (MQ=255) ccGATTGGCTGACGGGGGCCGAGCCGTTTAGCGCCCGGGCGCCGTCTGCGCCAGATGGGCGTTTGGGCTGAGGACCTCTGCGCGGGTAACCCCGCTCCTCCGCGAGG‑GGTTTTCCCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCa < 1:4174526/150‑1 (MQ=255) cgttttGCTGACGGGGGCCGCGCCGATTTTCGCCCCGGCGCCGTAGGCGCCAGACGGGCGTTTGGGCGGAGGACCTCTTCGCGGTTAACCCCGCTCCTCCGCGCGC‑GGGTTAACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAg < 1:8520891/147‑1 (MQ=255) gATTTGCTGACTGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGc < 2:7856585/150‑1 (MQ=255) aTTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTGAAACCCCGCCAACGCCAGCGGGGTTTACCC‑CGCAAGGGCCGCCGCAGCCAAAACAGCATTCAGcc > 1:6242631/1‑150 (MQ=255) cTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTGAAACCCCACCGAAGCCAGC‑GGGTTTAACCCCCCAAGGGGCGCACCAGCCAAAAAACAATTAAGCCAGTaa > 1:5228660/1‑150 (MQ=255) tGACAGGGGCCGAGCCGATTACCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCCAAACAGATTTCAGCCAGTAAt > 1:8009418/1‑150 (MQ=255) gcccggggCCGCGCCGATTAGCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACGTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATc < 2:7459537/146‑1 (MQ=255) gACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATc < 2:5752323/150‑1 (MQ=255) accggggCCGAGCCGTTTTTCGACCCGGCGCGTTATGCGCCAGACGGGCGTTTGGGCTGAGGACCTCTTCGCGGTTAAACCCGCTCCTACGCGCGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCg < 2:6768942/147‑1 (MQ=255) aGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCCCTCCTACGCGAGC‑GGGTTTAACCGCGAAAGGGCCGCACAAGCCAAAAAAGATTTCAGCCAGAAATCGGt > 2:4863800/1‑150 (MQ=255) aGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGGTAACACCCGCCAAAGCCAGC‑GGGTTTTACCCCGCAAGGGCCCCACAAGCCACAACAGATTTAACCCAGTAAACggg > 1:1243446/1‑149 (MQ=255) ggCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCAACGCGAGC‑GGGTTTAACCGCGAAAGGGCCCCAGAAGCCAAAACAGATTTCACCCAGTAAAAGGTGca > 2:4976078/1‑149 (MQ=255) cgccccGGCGCCGTATGCGCCAGACGGGCGTTTGGGCGGAGGACCTCTGCGCGGGTAAACCCGCTCCTCCGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTc < 2:263384/147‑1 (MQ=255) cGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTCGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTc < 2:4159005/150‑1 (MQ=255) ttccGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCgg > 2:3593599/3‑150 (MQ=255) aCCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCCATACAGATTTCAGCCAGGAATCGGTGCGTGCAGGTGCCGGCGCgg > 2:1324012/1‑150 (MQ=255) aCCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAACCCCTCCGACGCGCGC‑GGGTTTACCCGCGCAAGGGCCGCAGAAGCCCAAACAGAGTTCAGCCCGGAATCGGGGCGTGCAGGGGCCGGCGCgg > 2:7793259/1‑150 (MQ=255) cccGTATGCGCCAGAAGGGCGTTTGGGCTGAGCACCTCTTCGCGGGTAAACCCGCTCCTACCCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAAtgc < 2:5463768/149‑1 (MQ=255) cGTAGGCGCCAGACGGGCGTTGGGGCGGCGGACCTCTTCGCGGGTAAACCCGCTCCTCCGCGAGC‑GGTTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAAtgctg < 2:3894649/150‑1 (MQ=255) gTAGGCGCCAGACGGGCGTTGGGGCTGAGGACCTCTTCGCGGGAAAACCCGCTCCTCCGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAAtgctgc < 2:380495/150‑1 (MQ=255) tGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGCGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCa < 2:1505289/150‑1 (MQ=255) tGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAACCCCTCCTACCCGAGC‑CGGGTTACCCCCGAAAGGGCCGCACAAGCCAAAAAACATTTAAGCCACTAAAAGGTGCGTTCAGGTGCCCGCAAGGATAAttctgcaaa > 1:6518281/1‑147 (MQ=255) gcCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTTAACCCGCTCCGACGCGCGC‑GGGGTTACCCGCGCAAGGGCCGCAGAAGCCAAAACAGATTTCAGCCCCGAAAAGGTGCGTGCCGGTGCCGGCGCGGCTAATGCTGCTCATac > 2:3187787/1‑150 (MQ=255) aGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACAcc < 2:1999996/150‑1 (MQ=255) aaGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAAACCCCACCAACGCCAGC‑GGGGTTAACCCCGAAAGGGCCGCAGAAGCCAAAAAAGATTTAAGCCAGTAATCGGTGCGTTCAGGTGGCGGCGCGGATAAATCTGCTCATACACCtt > 2:4532451/1‑150 (MQ=255) gggggGTTGGGGCTGTGGCCCTGTTGGGGGGTAACCCGGCTCCTCGGGGTGG‑GTGTTGACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTg < 1:4638120/149‑1 (MQ=255) gctgccatGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGc < 2:2098820/143‑1 (MQ=255) ggCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGca > 2:8066000/1‑150 (MQ=255) tttGGGCTGCGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGG‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACAcc < 1:4941922/150‑1 (MQ=255) ttGGGTTGTGGGCCTTTTCGGGGTTAAACCCGCTCCTACGCTTGC‑GGTTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACAccc < 1:5737455/150‑1 (MQ=255) ttGGGCTGTGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGCGG‑GGTTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACAccc < 1:2686273/150‑1 (MQ=255) ggCTGAGGACCTCTTCGCGGTTAAACCCGCTCCTACGGGTGG‑GGTTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCgca < 1:5407824/150‑1 (MQ=255) ggCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCgca < 2:5077909/150‑1 (MQ=255) ggCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCgca < 2:6848448/150‑1 (MQ=255) aGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACt < 2:4297995/150‑1 (MQ=255) gccacctTCGCGGGTAAACCCGCGCCTACGCGTGC‑GGGTTTCCCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTg < 1:6067437/145‑1 (MQ=255) gACCTCTTCGCGGTTAAACCCGCTCCTCCGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTg < 1:3867098/150‑1 (MQ=255) gACCTCTTCGCGGGAAAACCCGCTCCTCCGCGCGG‑GGTTTCACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTg < 1:1654394/150‑1 (MQ=255) aCCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGc < 2:2684376/150‑1 (MQ=255) ctctTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCtc < 2:8292202/150‑1 (MQ=255) tctTCGCGGGTAAACCCGCTCCGACGCGAGC‑GGGTTTACCCGCGCAAGGGCCGCAGAAGCCCATACAGATTTAAGCCAGTAATAGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCATGCACACCCGCAGCACATGCtca > 1:550915/1‑150 (MQ=255) ttCGCGGGTAAACCCGCTCCTACGCGAGG‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCtcatc < 2:8255029/150‑1 (MQ=255) gTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAg > 1:1844938/1‑150 (MQ=255) tAACCCCGCTCCGACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAgc < 1:6632983/150‑1 (MQ=255) aaaCCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCGAcgcg > 1:6202465/1‑150 (MQ=255) aaCCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAgcgc > 1:3912061/1‑150 (MQ=255) aaCCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAgcgc > 1:2152814/1‑150 (MQ=255) cccGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGccc > 1:2513287/1‑150 (MQ=255) cccGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGccc > 2:530812/1‑150 (MQ=255) cccGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGccc > 2:1875476/1‑150 (MQ=255) ccGCTCCTACGGGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCg < 2:28890/150‑1 (MQ=255) ccGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCg > 1:6893956/1‑150 (MQ=255) gCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGc > 1:7472024/1‑150 (MQ=255) tCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAAtg < 2:6032725/94‑1 (MQ=255) tCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGcca < 1:2791721/150‑1 (MQ=255) ccTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGccac > 1:3498833/1‑150 (MQ=255) ccTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGccac < 2:8749237/150‑1 (MQ=255) tACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGccacca > 1:7752524/1‑150 (MQ=255) aCGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGCcaccac > 2:7123478/1‑150 (MQ=255) | GCATTATCGCAATGGGCTGGTGCTGGCGCCGGCTTCGTGCCAGCTGTTTACCGATTTGCTGACAGGGGCCGAGCCGATTATCGACCCGGCGCCGTATGCGCCAGAAGGGCGTTTGGGCTGAGGACCTCTTCGCGGGTAAACCCGCTCCTACGCGAGC‑GGGTTTACCCGCGAAAGGGCCGCAGAAGCCAATACAGATTTCAGCCAGTAATCGGTGCTTGCAGGTGCCGGCTCGGATAATGCTGCTCATACACCTTGCACACCCGCAGCACTTGCTCATCAGCAAAGCGCCCGGCCACCAC > NC_002947/718313‑718611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |