| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 733,851 | G→A | 5.3% | intergenic (+18/+173) | PP_t11 → / ← ndh | tRNA‑Lys/NADH dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 733,851 | 0 | G | A | 5.3% | 2058.8 / 61.0 | 646 | intergenic (+18/+173) | PP_t11/ndh | tRNA‑Lys/NADH dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (375/234); new base A (23/11); total (399/247) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
Only 100 of 654 total aligned reads displayed.
GCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGTAAACCCGCG > NC_002947/733702‑734000 | gCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCCCATg > 2:3224839/1‑150 (MQ=255) cTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCATTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATga < 1:295549/150‑1 (MQ=255) gggAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTGCACGACCCCCCATGAACAAAGGGCATCTCGCATGAGATg > 1:8662580/1‑150 (MQ=255) ggAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGc < 1:5234325/150‑1 (MQ=255) gAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGcc > 2:1229799/1‑150 (MQ=255) agcagcATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCATGCGAGATGccc < 1:2571938/150‑1 (MQ=14) aGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGccc > 1:4161953/1‑150 (MQ=255) gCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTTGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCATGCGAGATGCCCt < 1:6052014/150‑1 (MQ=14) aGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCATGCGAGATGCCCttt < 2:4894572/150‑1 (MQ=255) gATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCttttt > 2:3732215/1‑150 (MQ=255) tCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCttt < 1:912307/150‑1 (MQ=255) tCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCttt > 1:2848030/1‑150 (MQ=255) cAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCtttt > 1:8508070/1‑150 (MQ=255) aGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTCACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCcttttgcttttg > 1:4619973/1‑150 (MQ=255) aGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTg > 2:7416906/1‑150 (MQ=255) aGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTg > 1:3737782/1‑150 (MQ=255) aGGAGTCCTAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTg < 1:6317135/150‑1 (MQ=255) ttCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCg > 1:6946411/1‑150 (MQ=255) ttCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCg > 2:3026735/1‑150 (MQ=255) cGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGaa > 1:7384777/1‑150 (MQ=255) cGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGaa > 1:6868655/1‑150 (MQ=255) cGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGaa > 1:652089/1‑150 (MQ=255) gAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGaaa > 1:7805126/1‑150 (MQ=255) gAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGaaa > 2:3842357/1‑150 (MQ=255) gAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGaaa > 2:1022234/1‑150 (MQ=255) aaTCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGaaaa > 2:532022/1‑150 (MQ=255) tCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAAt > 2:4752362/1‑150 (MQ=255) ccTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATgcg < 2:4576941/150‑1 (MQ=255) ccTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATgcg > 1:2397336/1‑150 (MQ=255) ccTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATgcg > 1:5794042/1‑150 (MQ=255) ccccGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCAt > 2:1809658/1‑150 (MQ=255) cccGACCAGTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTAGGCTTGTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTATTCTTTTGACTCGAAAAATGAGCCCATc > 1:3161749/1‑150 (MQ=21) gACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGgc < 2:1558174/150‑1 (MQ=255) gACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGgc < 1:2730603/150‑1 (MQ=255) cATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCa > 2:642330/1‑150 (MQ=255) cATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCa > 2:5073416/1‑150 (MQ=255) gTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCt > 2:8061704/1‑150 (MQ=255) gTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCa > 2:7018528/1‑150 (MQ=255) gTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCa < 1:7224652/150‑1 (MQ=255) aGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCt > 2:730731/1‑150 (MQ=255) tCAGTTGGTAGAGCAGTTGGCTTTTATCCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAATATGCGCCCATCGGCGCTATCGCACCTGCATCTAtt > 2:6006923/1‑150 (MQ=255) tCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAtt < 2:8640322/150‑1 (MQ=255) cAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAttt < 1:2221395/150‑1 (MQ=255) cAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAttt < 1:3829359/150‑1 (MQ=255) cAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAttt < 1:1521825/150‑1 (MQ=255) cAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAttt < 1:3438210/150‑1 (MQ=255) aGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAttgg > 2:7793347/1‑148 (MQ=255) gtgggTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGc < 2:8544786/147‑1 (MQ=255) gTTGGTAGTGCAGTTGTCTTTTAAACTAGTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCACTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGc < 1:5903111/150‑1 (MQ=37) ggTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTTCCTCGAAAAATGAGCCCATCGGCGCAATCCCACCTGCATCTATTTGCcac > 1:2643020/1‑150 (MQ=255) gTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCcaca > 1:39939/1‑150 (MQ=255) gTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCcaca > 1:2298028/1‑150 (MQ=255) ttGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTa > 1:4360562/1‑150 (MQ=255) ttGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTa > 2:7904507/1‑150 (MQ=255) cTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTa > 1:6138907/1‑150 (MQ=255) ttttAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAg > 1:7118265/1‑150 (MQ=255) ttttAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAg > 2:4183406/1‑150 (MQ=255) ttttAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAg > 1:5136951/1‑150 (MQ=255) ttAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAg < 2:2439725/148‑1 (MQ=255) ccAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCgg < 2:1384456/150‑1 (MQ=255) ccAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCgg < 2:6921265/150‑1 (MQ=255) ccAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCgg > 1:1678913/1‑150 (MQ=255) cAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCggg < 2:8183295/150‑1 (MQ=255) cAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCggg < 2:568872/150‑1 (MQ=255) aTTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGgcg > 2:6582613/1‑100 (MQ=255) tttgTCGTAGGTTCGTATCCTTCACGACCCACCATGAACTAAGGTCATCTCTCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTc < 2:4076338/147‑1 (MQ=255) ggTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGaa < 2:3525489/150‑1 (MQ=255) gTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAAt < 2:8758489/150‑1 (MQ=255) ttCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCAGCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATg > 2:2148891/1‑150 (MQ=255) tCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAg < 1:3604822/150‑1 (MQ=255) tCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGACCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAg > 1:1382163/1‑150 (MQ=255) tACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGc > 1:3047507/1‑150 (MQ=255) tACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGc > 1:7992087/1‑150 (MQ=255) tACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGc > 1:7619783/1‑150 (MQ=255) acacGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCa < 2:2241927/150‑1 (MQ=255) cGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGcc < 1:8315903/150‑1 (MQ=255) gACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGcca > 2:4332197/1‑150 (MQ=255) ccaccaTGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGccacca > 2:332962/1‑150 (MQ=255) caccaTGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCAt < 1:6703397/150‑1 (MQ=255) accaTGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATc < 2:5475223/150‑1 (MQ=255) caTGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGc > 1:1070309/1‑150 (MQ=255) caTGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGc < 2:2744182/150‑1 (MQ=255) caTGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGc > 1:5619160/1‑150 (MQ=255) aTGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCa > 2:5184333/1‑150 (MQ=255) tGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCAt > 1:7704128/1‑150 (MQ=255) aaCAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTc > 1:5009469/1‑150 (MQ=255) aaaaaGGGCATCTCATGCGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTca > 2:1904307/3‑150 (MQ=255) aCAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTca < 1:2479100/150‑1 (MQ=255) aCAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTca < 1:3376278/150‑1 (MQ=255) cacaGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTcac < 2:674951/147‑1 (MQ=255) aaaGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTcaca > 2:8790255/1‑150 (MQ=255) aaaGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTcaca > 2:8368944/1‑150 (MQ=255) aGGGCATCTCATGCGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCt > 1:8079281/1‑93 (MQ=38) aGGGCATCTCATGCGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAgg > 2:6299333/1‑150 (MQ=255) gggCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGt > 2:6212542/1‑150 (MQ=255) gggCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGt > 1:4841182/1‑150 (MQ=255) gggCATCTCATGCGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGt > 1:1901977/1‑150 (MQ=255) gCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTc > 1:5506660/1‑106 (MQ=255) tctcGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGTAAAcc < 2:1630923/150‑1 (MQ=255) cGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGACAGTGCAGCCACCATCGCATTCACAGGTAAACCcgc < 1:1229799/150‑1 (MQ=255) | GCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGTAAACCCGCG > NC_002947/733702‑734000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |