| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 733,854 | T→C | 5.1% | intergenic (+21/+170) | PP_t11 → / ← ndh | tRNA‑Lys/NADH dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 733,854 | 0 | T | C | 5.1% | 2083.4 / 57.8 | 649 | intergenic (+21/+170) | PP_t11/ndh | tRNA‑Lys/NADH dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (372/238); new base C (22/11); total (398/251) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.32e-01 | |||||||||||
Only 100 of 657 total aligned reads displayed.
TGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGTAAACCCGCGCCT > NC_002947/733705‑734003 | cTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCATTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATga < 1:295549/150‑1 (MQ=255) tttGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATgag > 1:6921265/1‑150 (MQ=255) ttGGGAGCAGTATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATgaga < 2:5177859/150‑1 (MQ=255) gggAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATg > 2:1353100/1‑150 (MQ=255) gAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGcc > 1:3492872/1‑150 (MQ=255) agcagcATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCATGCGAGATGccc < 1:2571938/150‑1 (MQ=14) gCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCt < 1:2342018/150‑1 (MQ=255) gATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCttttt > 2:3732215/1‑150 (MQ=255) aTGTCAGGAGTTCGATTCCCCTCACCCCTACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTc < 1:484730/150‑1 (MQ=255) tCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCttt > 1:2848030/1‑150 (MQ=255) aGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCTATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTg > 2:451634/1‑150 (MQ=255) ggAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGc < 2:545643/150‑1 (MQ=255) gAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGcc < 2:1607614/150‑1 (MQ=255) gTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTc < 2:6884236/150‑1 (MQ=255) ttCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCg > 2:4886648/1‑150 (MQ=255) cGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGaa < 1:951407/150‑1 (MQ=255) gAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGaaa > 2:7650247/1‑150 (MQ=255) ccccTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATg < 2:3520037/150‑1 (MQ=255) ccccTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATg > 2:1883249/1‑150 (MQ=255) ccTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATgcg > 1:2397336/1‑150 (MQ=255) ccTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCAAGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATgcg > 2:3223606/1‑150 (MQ=255) cTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATgcgc < 2:6938085/150‑1 (MQ=255) tCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAATATGCGcc > 2:5015661/1‑150 (MQ=255) tCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGcc > 2:3842299/1‑150 (MQ=255) ccccGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCAt > 2:6528380/1‑150 (MQ=255) cccGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATc > 1:6636706/1‑150 (MQ=255) ccGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCg < 1:8516645/150‑1 (MQ=255) ccGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCg < 2:62274/150‑1 (MQ=255) gACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGgc < 1:3994380/150‑1 (MQ=255) gACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGgc < 1:2730603/150‑1 (MQ=255) gACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGgc < 1:7269356/150‑1 (MQ=255) cATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCa > 1:8352883/1‑150 (MQ=255) aTTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCaa > 2:6645468/1‑150 (MQ=255) tttttGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCATTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAAt > 1:3213698/1‑150 (MQ=255) ttGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCGATGGGCGCattttt < 2:7462716/150‑6 (MQ=255) tGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCGATGGGCGCatttttc < 2:7274917/150‑7 (MQ=255) gggTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCAc < 1:8162063/150‑1 (MQ=255) gTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCt > 2:8061704/1‑150 (MQ=255) tCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAATGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTg > 1:8695180/1‑150 (MQ=255) cGTTAGCTCAGTTGGTAGACCAGCTGGCTTTTAACCTATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGc < 2:3014606/150‑1 (MQ=255) aGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCt > 2:1226826/1‑150 (MQ=255) tCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAtt > 2:4324241/1‑150 (MQ=255) tCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAtt < 2:8640322/150‑1 (MQ=255) cAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAttt > 1:6784725/1‑150 (MQ=255) cAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAttt < 1:3829359/150‑1 (MQ=255) cAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTAttt < 1:1521825/150‑1 (MQ=255) gtgggTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGc < 2:8544786/147‑1 (MQ=255) ttGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGcc > 1:2224340/1‑150 (MQ=255) ggTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCcac > 1:2643650/1‑150 (MQ=255) ggTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCcac < 2:2395276/150‑1 (MQ=255) tAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGTGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCacac < 1:5678732/150‑1 (MQ=255) tAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCAAGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCacac > 2:1789051/1‑150 (MQ=255) agagCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACAcc < 1:5837168/150‑1 (MQ=255) agCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAAAACCACCTGCATCTATTTGCAACACCGc > 1:440414/1‑150 (MQ=255) aGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGcccc > 1:1705712/1‑150 (MQ=255) ttGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTa > 2:7904507/1‑150 (MQ=255) ttGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTa > 1:420084/1‑150 (MQ=255) ggCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATg < 1:5407545/150‑1 (MQ=255) gCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGt < 1:1925649/150‑1 (MQ=255) ttttAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAg > 1:8051301/1‑150 (MQ=255) ccAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACCAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCgg < 2:6406192/150‑1 (MQ=255) ccAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCgg > 1:2479466/1‑150 (MQ=255) cAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCggg < 2:8183295/150‑1 (MQ=255) cAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCggg < 2:4751270/150‑1 (MQ=255) cAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCggg > 2:3982662/1‑150 (MQ=255) gTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCcgc > 2:2042469/1‑150 (MQ=255) gTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCATTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCcgc < 1:597279/150‑1 (MQ=255) aGGTTCGAATCCTACTCGACCCACCATGAACATAGGGCATCTCGCATGAGATGCACTTTTTCTTTTTCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGAATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTGAACCcgctc < 1:5022554/150‑3 (MQ=255) gTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAATATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAAt > 2:7404318/1‑150 (MQ=255) gTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAAt < 2:8758489/150‑1 (MQ=255) tCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGc < 1:3743897/150‑1 (MQ=255) aaTCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGc > 1:7192525/1‑150 (MQ=255) tCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAg < 1:3604997/150‑1 (MQ=255) tCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGACCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAg > 1:1382163/1‑150 (MQ=255) tACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGc > 2:5274560/1‑150 (MQ=255) tACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGc < 1:7634750/150‑1 (MQ=255) tACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGc > 2:2630915/1‑150 (MQ=255) tACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGc > 2:1534714/1‑150 (MQ=255) tACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGc > 1:3047507/1‑150 (MQ=255) acacGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCa < 2:2241400/150‑1 (MQ=255) cGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCATTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGcc < 2:5676704/150‑1 (MQ=255) ccaccaTGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGccacca > 2:332962/1‑150 (MQ=255) ccaTGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGATTCACCCGCGAATGCGGCAGTGCAGCCACCATCg > 2:5966504/1‑150 (MQ=255) caTGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGc > 1:1070309/1‑150 (MQ=255) tGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCAt > 1:7704174/1‑150 (MQ=255) aaaaaGGGCATCTCATGCGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTca > 1:7816424/3‑150 (MQ=255) aCAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTca < 1:3376278/150‑1 (MQ=255) aaaGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTcaca > 2:8790255/1‑150 (MQ=255) aaaGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTcaca > 2:8368944/1‑150 (MQ=255) aGGGCATCTCATGCGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCt > 1:700410/1‑93 (MQ=38) gggCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGt > 1:6262649/1‑150 (MQ=255) gggCATCTCATGCGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGt > 1:5138588/1‑150 (MQ=255) gggCATCTCATGCGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGt > 1:4740806/1‑150 (MQ=255) ggCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGTa > 2:6196246/1‑150 (MQ=255) gCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGTaa > 1:5594734/1‑150 (MQ=255) aTCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCCCCATCGCATTCACAGGTAAAc < 1:6392493/150‑1 (MQ=255) ctcGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGTAAAccc < 2:4161953/150‑1 (MQ=255) ctcGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGTAAAccc < 1:6093206/150‑1 (MQ=255) cGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGACAGTGCAGCCACCATCGCATTCACAGGTAAACCcgc < 1:1229799/150‑1 (MQ=255) cATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGTAAACCCgcgc < 1:7496474/150‑1 (MQ=255) | TGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGAACAAAGGGCATCTCGCATGAGATGCCCTTTTTCTTTTGCCTCGAAAAATGCGCCCATCGGCGCAATCCCACCTGCATCTATTTGCCACACCGCCCCTATGTAGGAGCGGGTTCACCCGCGAATGCGGCAGTGCAGCCACCATCGCATTCACAGGTAAACCCGCGCCT > NC_002947/733705‑734003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |