| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 867,950 | A→C | 8.0% | intergenic (+45/+132) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 867,950 | 0 | A | C | 8.0% | 1546.9 / 22.5 | 598 | intergenic (+45/+132) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (214/315); new base C (32/35); total (246/352) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 636 total aligned reads displayed.
GACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGC > NC_002947/867801‑868099 | gacctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCcaca < 2:7577353/150‑1 (MQ=255) cgcggccctggacctggcagagagcagcccggcggccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAg > 1:6577871‑M1/137‑150 (MQ=255) cctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCACAgg > 2:3513403/1‑150 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 1:1135101/150‑1 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 2:8296683/150‑1 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 2:3730686/150‑1 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 2:1910535/150‑1 (MQ=255) ctggacGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGa < 1:8743408/150‑1 (MQ=255) cAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGcgcc < 1:8406345/150‑1 (MQ=255) aaGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGcgccc > 2:3300938/1‑149 (MQ=255) aCGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCAcc < 2:5742936/150‑1 (MQ=255) gAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACCGGCGGCGCGCCGCAccag > 2:1591011/1‑148 (MQ=255) gCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCg > 2:1416521/1‑150 (MQ=255) cACGGCAAGACCTTCGTCGAGCAGTTTGCCGACCAGCGCAATGCCCCTGTGTACATCGATTTCATCGTTAACGCCCGTGGCTGATCTGTTGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCgg < 1:105140/150‑1 (MQ=39) cACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCGTCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCgg < 1:7352555/150‑1 (MQ=255) cACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCgg < 1:5764565/150‑1 (MQ=255) agagcagcccggcggccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCgg > 2:7471784‑M1/117‑150 (MQ=255) agagcagcccggcggccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagccagtgccggcctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCgg > 1:3760379‑M1/117‑150 (MQ=255) agcagcccggcggccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcacGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGc < 1:4847741‑M1/36‑1 (MQ=255) aaGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTa < 1:5256457/150‑1 (MQ=255) gACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTAcc < 2:5247983/150‑1 (MQ=255) cTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGaa < 1:1772861/150‑1 (MQ=255) ttCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAAc < 2:2764328/150‑1 (MQ=255) gccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCt > 1:2814769‑M1/103‑150 (MQ=255) ccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGaaccgg < 1:2692979‑M1/49‑3 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgt < 2:6710256/150‑1 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgt < 1:4971559/150‑1 (MQ=255) caagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgt > 1:6289927‑M1/101‑150 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgtg < 1:4349183/150‑1 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgtg < 2:6326749/150‑1 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgtg < 2:2100900/150‑1 (MQ=255) cgAGCAGAGTGCCGACCAGCGCAAGGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCtgtg < 1:4065261/150‑1 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg < 2:4536010/150‑1 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg < 2:5691148/150‑1 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCACTTCGCGGGCGCGCCCGCTCCCACAGGAGGAGCCCCGCACCGGCGGGCATTACAGAAccgggtg > 2:8191563/1‑145 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg > 1:1355798‑M1/99‑150 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcacGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTgg > 2:2326949‑M1/99‑150 (MQ=255) gCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGa < 1:771073/150‑1 (MQ=255) cactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGa > 2:4995883‑M1/97‑150 (MQ=255) ctacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGc > 1:1606047‑M1/95‑150 (MQ=255) ctacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGc > 1:8557982‑M1/95‑150 (MQ=255) tacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑g > 2:1223371‑M1/94‑150 (MQ=255) aTTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑gg < 2:6906315/150‑1 (MQ=255) ttGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑ggg < 1:6003525/150‑1 (MQ=255) ttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCAt > 2:6514145‑M1/89‑150 (MQ=255) ccGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCAt > 2:2013989/1‑150 (MQ=255) ccGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCAAGGAGGCGCGCCGCCCCAGCGGGCAGTAACGAAACCGTGGGGGC‑GGGCAt > 1:1419295/1‑150 (MQ=255) ccAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCAGCGGGCATTACCGAACCTGTGGGAGC‑GGGCAAgccc < 2:5620149‑M2/150‑5 (MQ=255) cAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTAGCGCCGCACCAGCGGGCATTACCGAACCAGGGGGAGC‑GGGCATgcccg < 2:4263267‑M2/150‑6 (MQ=255) cgcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcga > 1:3304927‑M2/1‑142 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGCGTCGCGCCGCACCAGCGGGCATTACCGCACCGGTGGGAGC‑GGGCATgcccgcgccga < 2:7043575‑M2/150‑12 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaaga > 1:5600891‑M2/1‑139 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaaga > 1:4705063‑M2/1‑139 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCCCACCTTCGGGCAGTACCCAACCGGGGGGAGC‑GGGGCTTCCCGCGGAGAGGGCg > 2:3360166/1‑150 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCCCACCAGCGGGCAATACCCAACCAGTGGGAGC‑GGGCATGCCCGCGCAGAGGGCg > 2:472984/1‑150 (MQ=255) tACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCCCCGGAGTCCCGCCCCACCCGCGGGCAATACCGAACCCGTGGGGGC‑GGGCCTGCCCCCGCAGAGGGCGGTACacg > 2:4139506/1‑148 (MQ=255) aCATCGAGATCATCGATAACGCCCGTGGCTGATCTGTAGCCAGGGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCGGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGc < 1:3543230/150‑1 (MQ=255) aCATCGAGATCAGCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGc < 2:2457964/150‑1 (MQ=255) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTg > 2:7296469/1‑150 (MQ=255) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTCGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 1:1915345/150‑1 (MQ=255) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTAGCGGGCGCGCCCGCGCCCACAGGTGTCGCGCCGCACCGGCGGGCCTTACCGAACCTGGGGGAGC‑GGGCAAGCCCGCGCAGAGGGCGGTACAGGCTGa > 2:6614383/1‑150 (MQ=255) gaacatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCaa < 1:711604/147‑1 (MQ=255) tcttcGATAAAGCCCGTGGCGGATCTGTCGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc < 1:6943223/147‑1 (MQ=255) tcGATAACGCCCGTGGGTGATCTGTCGCCCGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGcc < 1:4572737/150‑1 (MQ=39) tcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGcc < 1:8063393/150‑1 (MQ=255) tcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCCCCGGCGTCGCGCCGCCCCCGCGGGCCGTACCCAACCGGGGGGGGCGGGGCATGCCC‑CGCAGCGGGGGGGACAGGCGGGACACGCGcc > 2:3188269/1‑150 (MQ=255) gATAAAGCCCGGGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCAGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAg < 1:1251637/150‑1 (MQ=255) aTAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCAGTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAgg < 2:4863654/150‑1 (MQ=255) aGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGcaca < 2:296496/150‑1 (MQ=255) tCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCTTTACCGAACGTGTGGGCGC‑GGGCATGCCCGCGATGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGa < 1:3404444/150‑1 (MQ=255) tCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGTAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGa < 2:8679210/150‑1 (MQ=255) tGTAGCCAGTGCCGGCCTCTTCCCGGGCGCCCCCCCGACCAACGCAGGAGCGCCCCCCCATCGGGCCATAACCAACCAGGGGGAGC‑CGGCATGCCCCCCACGAGCGCGCGAAAAGCTGCAAAACCGCCCCGCACAAAAAACCCCCCCAgg > 2:4426733/1‑150 (MQ=255) aGTGCCGGCCTCTTCGCGGGCGCGCCCCCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATAAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGttt > 2:8031335/1‑150 (MQ=255) gggCCGGCCTCTGCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCTTTCCCGAACCTGGGGGAGC‑GGGCATGCCCGCGAAGTGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGtttt < 1:3054640/148‑1 (MQ=255) gCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 2:5957798/150‑2 (MQ=255) gCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 2:6251622/150‑2 (MQ=255) gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCGGCGGGCATTAACGCACCGGGGGGAGC‑GGGCCATCCCCCGAAGAGGGCGGTACAGGCTGTTCAAGCGCCAGGCACAAAAAAACCCCCGAGGGGCGGTTTTGCGtt > 2:3904380/1‑150 (MQ=255) ccTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 2:6818865/150‑1 (MQ=255) cgctTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCGGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTc < 2:771226/148‑1 (MQ=255) gcgcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagagggcggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtc < 2:79498‑M2/150‑85 (MQ=255) gcgcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCtt > 2:2218395/1‑150 (MQ=255) gcgcgcCCGCACCCACAGCAGTCGCGCCGCACCTCCGGGCATTACCGAACCTGTGCGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCtt < 2:1724351/150‑1 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa > 1:722564/1‑150 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa > 1:5914130/1‑150 (MQ=255) gcgcCCGCCCCCACCGGAGTCGCGCCGCACCTGCGGCCATAACCGCACCGGTGGGAGC‑GGGCAGCCCCGCGAAGAGGGCGGTACAGGCTGAACAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa < 1:347563/150‑1 (MQ=255) CCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAATCGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCg < 2:7166953‑M1/150‑1 (MQ=255) CCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCTGACCGGCTTAAGCGt < 1:8204884‑M1/150‑1 (MQ=255) CCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGt < 2:5153992‑M1/150‑1 (MQ=255) CGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa > 2:2808986‑M1/1‑150 (MQ=255) CGCCCCCCCCGGAGTCGCGCCGCACCTGCGGGCATTCCCGACCCGGTGGGCGC‑GGGCAGGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa > 1:5438587‑M1/1‑150 (MQ=255) CTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGt > 2:8786137‑M1/1‑150 (MQ=255) tCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCACgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgc < 1:2005592‑M2/150‑95 (MQ=255) ccACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctc < 2:5471731‑M2/150‑97 (MQ=255) cacaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagagggcggtacaggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcg < 1:6423296‑M2/150‑98 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:2238615‑M1/150‑1 (MQ=255) cCAGGAGTCGCGCCGCACCTGCGGCCAGGACCGACCCTGGGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGCTCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg > 2:7767892‑M1/2‑150 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcga < 1:7926022‑M2/150‑99 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagagggcggtacaggctgatcaagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcgacg < 2:8590458‑M2/150‑99 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATgcccgcgaagagggcggtacaggctacagatcagccccgggctttatcgatgatctagatgtactcaggggcattgcgctggtcggcaatatgctcga < 1:2532611‑M2/150‑99 (MQ=255) ACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTATTGCTTg < 1:8665543‑M1/150‑1 (MQ=255) | GACCTGGACGGCAAGGACGAGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGC‑GGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGC > NC_002947/867801‑868099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |