| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 867,967 | T→A | 6.3% | intergenic (+62/+115) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 867,967 | 0 | T | A | 6.3% | 1779.9 / 17.8 | 616 | intergenic (+62/+115) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (193/344); new base A (37/9); total (255/361) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.07e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 621 total aligned reads displayed.
AGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTG > NC_002947/867820‑868116 | cACGGCAAGACCTTCGTCGAGCAGTTTGCCGACCAGCGCAATGCCCCTGTGTACATCGATTTCATCGTTAACGCCCGTGGCTGATCTGTTGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑Cgg < 1:105140/150‑1 (MQ=39) aCGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCACCTG‑Cggg > 2:4542153/1‑150 (MQ=255) ggCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCAGGAGTAGCGCCGCACCAG‑CCGGcc > 1:6437371/1‑149 (MQ=255) gCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGC‑CCGCAGGTG‑Cggcgcga < 2:7274569/150‑6 (MQ=255) cAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCAtt < 2:8743150/150‑1 (MQ=255) aaGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTa < 1:5256457/150‑1 (MQ=255) gACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTAcc < 2:7019566/150‑1 (MQ=255) gACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTAcc < 2:6529656/150‑1 (MQ=255) cggcggcccagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCg < 2:4813252‑M1/43‑1 (MQ=255) ttCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAAc < 2:530210/150‑1 (MQ=255) ttCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTGCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAAc < 2:7955123/150‑1 (MQ=255) cgtcgAGCAGATCGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCt < 1:2080243/150‑1 (MQ=255) ccaagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGaaccgg < 1:2692979‑M1/49‑3 (MQ=255) caagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCCCAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCtgt > 1:337099‑M1/101‑150 (MQ=255) caagcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCtgt > 2:5158954‑M1/101‑150 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCtgtg < 2:6693704/150‑1 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTgg < 2:2717269/150‑1 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTgg > 2:2930584‑M1/99‑150 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcacGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTgg > 1:2802649‑M1/99‑150 (MQ=255) cactacgcttaagccggtctgaaacgcaaacacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGa > 1:1502845‑M1/97‑150 (MQ=255) cactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGa > 1:1365834‑M1/97‑150 (MQ=255) ctacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcgtggcgcttgatcagccagtgccggcctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGc > 1:4861367‑M1/95‑150 (MQ=255) ctacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGc > 2:1371122‑M1/95‑150 (MQ=255) ctacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGc > 1:8557982‑M1/95‑150 (MQ=255) acgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCgg > 2:4051121‑M1/93‑150 (MQ=255) aTTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCgg < 2:6906315/150‑1 (MQ=255) ccGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCAt > 2:2013989/1‑150 (MQ=255) gACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGGGTCGCGCCGCCCCAG‑CGGGCCTTACCGAACCGGGGGGGGCGGGCATgc < 2:6725192‑M2/150‑3 (MQ=255) gACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATgc > 2:5540568‑M2/1‑148 (MQ=255) ccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagccagtgccggcctcttcgcgggcgcGCCCGCTCCCACCGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCcg > 2:4888020‑M1/84‑150 (MQ=255) ccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagccagtgccggcctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCcg > 2:3122762‑M1/84‑150 (MQ=255) cAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCATCGCGGGCGCGCCCCCGCCCCCACGACGAGCGCCCCACCAG‑CGGGCCATACCGAACCAGTGGGAGCCGGCATgcccc < 1:4368817‑M2/150‑6 (MQ=255) cgcAATGCCCCTGAGTACATCGATATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATgcccgctc > 1:1860680‑M2/1‑142 (MQ=255) gcAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTAGCGGGGGCGCCCCCGCCCCCCCGGGTCGGGCCCCCCCCGCCGGGCGTAACCCAACAGGGGGGGGCGGGCGGGccccgcc > 1:8249320/1‑146 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATgcccgcgaaga > 1:5600891‑M2/1‑139 (MQ=255) aaTGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATgcccgcgaaga > 1:6594798‑M2/1‑139 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCCCACCTT‑CGGGCAGTACCCAACCGGGGGGAGCGGGGCTTCCCGCGGAGAGGGCg > 2:3360166/1‑150 (MQ=255) cccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTAGCGGGCGCCCCCCCGCCCCAACGCGTAGCGCCCCACCCG‑CGGGCCATAACCAAACAGGGGGGGCGGGCCGGCCCCCGCCGAGGGCg > 1:1921391/1‑150 (MQ=255) cTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGt < 2:2447397/150‑1 (MQ=255) ggacacCGAGATCACCGATAAAGCCCGTGGCTGATCTGTAGCCAGGGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCAGGAGTCGCGCCGCCCCTG‑CGGGCATTACCGACCCGGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAg < 1:4703528/148‑1 (MQ=255) acacCGAGATAATCTATAAAGCCCGTGGCTGATCTGTAGCCAGGGCCGGCCTCTTCGCGGGCGCCCCCGCCCCCACCGGCGTCGCGCCGCACCTG‑CGGGCATTACCGACCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGc < 1:1159726/150‑1 (MQ=255) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCCCCAG‑CGGGCCTTACCGAACCGGGGGGAGCGGGCATGCCCGCGCAGAGGGCGGGCCAGGcgg > 2:6420635/1‑148 (MQ=255) tctagaACATCGATAAAGCCCGTGGCTTATCTGTAGCCAGTGCCGGCATCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCCAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 1:7731269/147‑1 (MQ=39) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCTGGGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGGGGGAGCGGGCAGGCCCGCGAAGAGGGCGGTACAGGCTGa < 1:6089826/150‑1 (MQ=255) gaacatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCaa < 1:711604/147‑1 (MQ=255) gggcgttttttgtgcctggcgcttgatcagccagtgccggcctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc > 2:1669686‑M1/56‑150 (MQ=255) gATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAg < 1:3513428/150‑1 (MQ=255) aTAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCAGGTGTCGCGCCGCCCCGG‑CGGGCAATACCCAACCAGGGGGAGCGGGCCTGCCCCCGCAGAGGGCGGGACACGCAGATAAACCGccccg > 2:8192540/1‑147 (MQ=255) aTAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCCCAGGAGTCGCCCCGCACCAG‑CGGGCCATACCCAACCAGTGGGCGCGGGCCAGCCCCCGACGAGGGCGGTACACGCGGGTCAACAGCCAgg > 1:7934374/1‑150 (MQ=255) aaaGCCGGGGGCTTATCTTTAGCCCGTGCCGGCCGCTTGGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCGG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGca < 1:2428336/150‑1 (MQ=255) gCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCACGCGTCGCGCCGCACCTG‑CGGGCCTTACCGAACCGGTGGGGGCGGGCCTGCCCGCGACGCGGGCGGGGCCGGCTGTGCAAGCGCCAGGCACaa > 2:6126308/1‑150 (MQ=255) tCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCCTTACCGAACCGGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCgg > 2:7889430/1‑149 (MQ=255) tGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGACCACCGGGGTCGCGCCGCCCCAG‑CGGGCCGTACCGCACCGGGGGGCGCGGGCCAGCCCGCGCAGAGGGGGGGACCGGCTGATCAAGCGCCAGGCCCAAAAAACGcccccggg > 2:7735578/1‑146 (MQ=255) tGTAGCCAGTGCCGGCCTCTTCCCGGGCGCCCCCCCGACCAACGCAGGAGCGCCCCCCCAT‑CGGGCCATAACCAACCAGGGGGAGCCGGCATGCCCCCCACGAGCGCGCGAAAAGCTGCAAAACCGCCCCGCACAAAAAACCCCCCCAgg > 2:4426733/1‑150 (MQ=255) gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCACAGGAGTCGCCCCCCACCAG‑CGGGCAATAACCAACCGGTGGGTGCGGGGAAGCCCCCGAAGAGGGCGGTGCAGGCGGATAAAACCCCACGCACAAAAAAAGCCCCCAggg > 2:3816945/1‑150 (MQ=255) tAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAgggg > 2:8058164/1‑150 (MQ=255) tGCCGGCCTCTTGGGGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCACCTG‑CGGGCATCACCGACCCTGTGGGCGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGttttt < 1:3101818/150‑1 (MQ=255) gCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGACCCGGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 2:7518488/150‑2 (MQ=255) cGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCAGTACCGAACCGGTGGGAGCCGGCAAGCCCGCGAAGAGGGCGGTACAGGCTGAACAAGCGCCCGGCACAAAAAAAGCCCCGAGGGGCGTTTTTGCg > 1:7248360/1‑150 (MQ=255) ggCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGACCCTGTGGGAGCGGGCATGCCCGCGACGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGt < 2:8664657/150‑1 (MQ=255) gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGtt < 2:3588335/150‑1 (MQ=255) cccctTCGCGGCCGCCCCCGCACCCACCGGCGTCGCGCCGCACCTG‑CGGTCATTACCGAACCTGTGGGAGCGGGAAGGCCCGCGAATAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 1:1662015/147‑1 (MQ=255) ccTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 2:6818865/150‑1 (MQ=255) tctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCa < 2:1883202/150‑1 (MQ=255) cctTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCa < 2:2779267/149‑1 (MQ=255) ttCGCGGGCGCGCCCGCTCCCCCAGGCGTCGCGCCGCACCTG‑CGGGCCTTACCGAACCTGTGGGAGCGGGCCAGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCCGGCACAAAAAACGCCCCGAGGGGCGGTTTTGCGTTTCAGa > 2:2324695/1‑150 (MQ=255) ttCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGa < 2:7153675/150‑1 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa > 1:3428229/1‑150 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa < 2:5892509/150‑1 (MQ=255) GCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGc < 1:7393534‑M1/150‑1 (MQ=255) GCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGc > 2:5700034‑M1/1‑150 (MQ=255) CGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa < 2:3233099‑M1/150‑1 (MQ=255) GCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAg < 1:5862334‑M1/150‑1 (MQ=255) tCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgc < 1:5008923‑M2/150‑95 (MQ=255) TCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg < 2:5634590‑M1/150‑1 (MQ=255) TCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCACGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg < 1:8688518‑M1/150‑1 (MQ=255) ccACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctc < 1:8755314‑M2/150‑97 (MQ=255) cacaGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcg < 1:8135915‑M2/150‑98 (MQ=255) cacaGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcg < 2:503863‑M2/150‑98 (MQ=255) CACCGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt > 2:2180060‑M1/1‑150 (MQ=255) CACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:3648737‑M1/150‑1 (MQ=255) acaGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcga < 1:1261289‑M2/150‑99 (MQ=255) ACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg < 2:7706349‑M1/150‑1 (MQ=255) ACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg < 1:6973678‑M1/150‑1 (MQ=255) AGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGc < 2:8589442‑M1/150‑1 (MQ=255) GGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGTGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGcc > 2:8377168‑M1/1‑150 (MQ=255) GGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGcc < 1:6306475‑M1/150‑1 (MQ=255) GAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTGAGACCGGCTTAAGCGTAGTGCTTGGCCg < 1:2907065‑M1/150‑1 (MQ=255) GAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCg < 1:3972229‑M1/150‑1 (MQ=255) tCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGccgccg < 1:5745539/150‑1 (MQ=255) gcgcCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCggg > 2:4298723/1‑150 (MQ=255) cgccgcACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgc > 2:737947/1‑150 (MQ=255) gccgcACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgct > 1:5488841/1‑150 (MQ=255) ccgcACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgctg < 1:2126322/150‑1 (MQ=255) cgcACCGG‑CGGCCATTACCGACCGGGGGGGAGCGGGCAGGCCCGCGATGAGGGCGGTACAGGCTGATCAAGCGCCCGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgctgc < 1:4464256/150‑1 (MQ=255) gcACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgctgct > 1:4150989/1‑150 (MQ=255) gcACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTGTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgctgct > 2:2099603/1‑150 (MQ=255) aCCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctct > 1:5945049/1‑150 (MQ=255) cTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctctct < 2:4178652/150‑1 (MQ=255) tG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTg < 2:6306475/150‑1 (MQ=255) | AGCACGGCAAGACCTTCGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTG‑CGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTG > NC_002947/867820‑868116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |