| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 867,985 | T→G | 9.7% | intergenic (+80/+97) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 867,985 | 0 | T | G | 9.7% | 1361.9 / 17.9 | 562 | intergenic (+80/+97) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (184/286); new base G (50/19); total (253/309) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.21e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 599 total aligned reads displayed.
CGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCG > NC_002947/867836‑868131 | gtcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCtg > 2:8630455/1‑150 (MQ=255) tcgAGCGGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCtgt < 1:4126897/150‑1 (MQ=255) tcgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCtgt < 1:2115947/150‑1 (MQ=255) cgAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCtgtg < 2:6693704/150‑1 (MQ=255) gAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTgg < 2:4536010/150‑1 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcacGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTgg > 1:6487578‑M1/99‑150 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcacGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTgg > 2:2326949‑M1/99‑150 (MQ=255) agcactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcacGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTgg > 1:2802649‑M1/99‑150 (MQ=255) cactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagcctgtaccgccctcttcgcgggcatGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGa > 1:1365834‑M1/97‑150 (MQ=255) cactacgcttaagccggtctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagccagtgccggcctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGa > 1:4664440‑M1/97‑150 (MQ=255) agagTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGc < 1:5920934/150‑1 (MQ=255) aGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGc < 2:7129737/150‑1 (MQ=255) aTTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCgg < 2:6906315/150‑1 (MQ=255) aTTGCCGACCAGCGCAATGCCCCTGACTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCgg < 2:3031996/150‑1 (MQ=255) ccGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCAt < 1:7738843/150‑1 (MQ=255) ccGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGGGGGAGCGGGCAt > 2:7228400/1‑150 (MQ=255) cGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGCCCCCACGAGTGGCGCCCCCCCCGCGGGCCATTA‑CGAACCAGAGGGTGCggggcag > 1:1052389/1‑146 (MQ=255) gACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGGGTCGCGCCGCCCCAGCGGG‑CCTTACCGAACCGGGGGGGGCGGGCATgc < 2:6725192‑M2/150‑3 (MQ=255) aCCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCAGGCCTCTTCGCGGGCGCGCCCCCGCCCAAAGGAGTCGCGCCCCACCTGCGGG‑CCTTAACGAACCTGTGGGTGCGGGCATggc < 2:329382‑M2/150‑4 (MQ=255) ccAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CCTTACCGAACCTGTGGGAGCGGGCAAgccc < 2:5620057‑M2/150‑5 (MQ=255) cAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CCTTACCGAACCGGTGGGAGCGGGCATgcccg < 2:6986694‑M2/150‑6 (MQ=255) cAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CAATACCGAACCGGTGGGAGCGGGCAAgcccg < 1:5727332‑M2/150‑6 (MQ=255) cAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTAGCCGGCGCGCCCCCACCCCAACGAATAGCGCCCCACCAGCGGG‑CAATAACCAACCAGTGGGTGCGGGCAAGcccc > 1:8645004/1‑149 (MQ=255) tctgaaacgcaaaaacgcccctcggggcgttttttgtgcctggcgcttgatcagccagtgccggcctcttcgcgggcgcGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGaa > 1:8004024‑M1/80‑150 (MQ=255) gCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAggg < 2:82049/150‑1 (MQ=255) gCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAggg < 2:4817521/150‑1 (MQ=255) ccccTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCGCCCCCAGGAGTCGCGCCGCACCTGCGGG‑CCTTACCGAACCCGTGGGAGCGGGCCTGCCCGCGAAGAGGGc > 2:2054667/1‑150 (MQ=255) cTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCACCCACACGAGTCGCCCCCCACCAGCCGG‑CAATACCGAACCAGTGGGAGCGGGCAAGCCCCCGAACAGGGCGGt > 1:7199113/1‑150 (MQ=255) tGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCTCCCACCGGAGTCGCGCCCCACCAGCGGG‑CCGTAACCAACCGGGGGGCGCCGGCCAGCCCCCGGAGTGGGGGGtg > 1:2079319/1‑149 (MQ=255) gTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAg < 2:3414878/150‑1 (MQ=255) aTCGAGATCATCGATAACGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑Tg < 1:701555/150‑1 (MQ=255) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCCCCGGAGTCGCGCCGCCCCAGCGGG‑CCTTACCGAACCGGGGGGAGCGGGCATGCCCGCGCAGAGGGCGGGCCAGGcgg > 2:6420635/1‑148 (MQ=255) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTAGCGGGCGCGCCCGCACCCACCGGAGGCGCGCCCCACCGGCGGG‑CATTACCGAAACGGTGGGAGCGGGCCAGCCCCCGCAGAGGGCGGGACAGGC‑Tg > 2:2581901/1‑150 (MQ=255) tCGAGATCATCTATAAAGCCCGTGGCTGATCTGTAGCCAGGGCCGGCCTCTGCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGa < 1:151080/150‑1 (MQ=255) cGATAAAGCCCGTGGCTGATCTGTAGCCCGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTTGATCagcctgt < 1:262848/150‑7 (MQ=39) gATAAAGCCCGGGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCAGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAg < 1:1251637/150‑1 (MQ=255) gCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACaa < 2:1956759/150‑1 (MQ=255) gCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCGGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACCGGC‑TGATCAAGCGCCAGGCACaa > 2:7868206/1‑150 (MQ=255) ccGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGCACCGGGGGGAGCGGGCCTGCCCGCGACGCGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACaaaa > 2:5732688/1‑150 (MQ=39) tGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCCCCGGCGGG‑CATTACCGAACCTGGGGGAGCGGGCATGCCCGCGAAGAGGGCGGGACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGccc > 2:2778044/1‑150 (MQ=255) gATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGCGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGcccc < 2:6077300/150‑1 (MQ=255) tGTAGCCAGTGCCGGCCTCTTCCCGGGCGCCCCCCCGACCAACGCAGGAGCGCCCCCCCATCGGG‑CCATAACCAACCAGGGGGAGCCGGCATGCCCCCCACGAGCGCGCGAAAAGC‑TGCAAAACCGCCCCGCACAAAAAACCCCCCCAgg > 2:4426733/1‑150 (MQ=255) gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCCCGACCACAGGACTCGCGCCCCACCAGCCGG‑CCTTAACCAACCAGTTGGAGCCGGCATGCCCGCGAAGAGGGGGGTTCAGGC‑GGATAAAGCCCCAGGCCCAAAAAAACCCCCCAggg > 2:315813/1‑150 (MQ=255) aGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCGGTGGGAGCGGGCATGCCCGCGTAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGgtt > 2:6578185/1‑150 (MQ=255) gTGCGGGCCTCTTCGCGGGCGCGCCCGCTCCCACCGGCGTCGCGCCGCACCTGCGGG‑AATTACCGAACCTGGGGGAGCGGGCAGGCCCGCGAAGCGGGGGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGtttt < 1:3055067/150‑1 (MQ=255) ccTCTTCGGGGGCGCCCCCGCACCCCCCGGTGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGCGCGGGCATGCCCGCTAAGAGGGCGTTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 1:6085591/150‑1 (MQ=255) ccTCTTCGCGGGCGCGCCCGCTCCCACAGGTGTCGCGCGGCACCTGCGGG‑CAGTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTAAAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 2:7691278/150‑1 (MQ=255) ccTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGttt < 2:6818865/150‑1 (MQ=255) ctctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTc < 1:5840786/150‑1 (MQ=255) ttcgcgggcacGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGc < 1:3309879‑M1/64‑1 (MQ=255) ggCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGCGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCt > 2:3986742/1‑150 (MQ=255) gcgcgcCCGCACCCACAGCAGTCGCGCCGCACCTCCGGG‑CATTACCGAACCTGTGCGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCtt < 2:1724351/150‑1 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcgg < 1:4376852‑M2/150‑87 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTaa < 2:5892509/150‑1 (MQ=255) CCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCTGACCGGCTTAAGCGt < 1:8204884‑M1/150‑1 (MQ=255) CCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGt < 1:1885791‑M1/150‑1 (MQ=255) CCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGt < 1:1615502‑M1/150‑1 (MQ=255) CGCTCCCACCGGAGTCGCGCCGCACCTGCGGG‑AATTACCGAACCTGGGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTa > 1:5437258‑M1/1‑150 (MQ=255) GCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAg < 1:558347‑M1/150‑1 (MQ=255) GCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAg < 1:3411328‑M1/150‑1 (MQ=255) tCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgc < 1:5008923‑M2/150‑95 (MQ=255) CCCACCGGAGTCGCGCCGCACCTGGGGG‑CATTACCGAACGTTTGGGCGGGGGAAGGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGc > 1:1128366‑M1/1‑150 (MQ=255) CCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGc > 2:378873‑M1/1‑150 (MQ=255) cacaGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcg < 1:8135915‑M2/150‑98 (MQ=255) cacaGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATgcccgcgaagagggcggtacaggctgcagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcg < 2:5051506‑M2/150‑98 (MQ=255) cacaGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcg < 1:7608407‑M2/150‑98 (MQ=255) CACCGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt > 2:2180060‑M1/1‑150 (MQ=255) cCAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTAGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg > 2:5380304‑M1/2‑150 (MQ=255) acaTGAGTCGCGCCGCACATGCGGG‑CATTACCGAACCAGTGGGAGCGGGCATGCCCGCGAAGATGGCGGTACAGGC‑TGATCAAGCGCAAGGCACAAAAAACGCCCACAGGGGCGTTTTTGCGTTTCAGACCTGATTAATCGTAGTGCTTg > 2:56551/1‑150 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcga < 1:3505862‑M2/150‑99 (MQ=255) ACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg < 2:7721154‑M1/150‑1 (MQ=255) AGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGc < 2:8589442‑M1/150‑1 (MQ=255) AGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGGGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGc < 2:5186991‑M1/150‑1 (MQ=255) GGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGTGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGcc > 2:8377168‑M1/1‑150 (MQ=255) GAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCg < 1:3972229‑M1/150‑1 (MQ=255) GAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCg < 1:8730051‑M1/150‑1 (MQ=255) tCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCGCgcccgcgaagaggccggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcgacgaaggt < 2:2859877‑M2/150‑106 (MQ=255) tCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGccgccg > 2:4925209/1‑150 (MQ=255) tCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGAGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGccgccg > 2:8060134/1‑150 (MQ=255) gcgcCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCggg < 1:8453206/150‑1 (MQ=255) gcgcCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCggg > 2:4298723/1‑150 (MQ=255) cgccgcACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgc < 2:4152038/150‑1 (MQ=255) cgccgcACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgc > 2:737947/1‑150 (MQ=255) gccgcACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgct > 2:8742471/1‑150 (MQ=255) gccgcACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgct > 1:6848324/1‑150 (MQ=255) gccgcACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgct > 1:4852622/1‑150 (MQ=255) gcACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgctgct > 1:6227297/1‑150 (MQ=255) tGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTg < 1:4214064/150‑1 (MQ=255) tGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTg < 2:6306475/150‑1 (MQ=255) cGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGcc < 2:1511119/150‑1 (MQ=255) g‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAgg < 2:3635839/150‑1 (MQ=255) aTTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTc < 1:2872218/150‑1 (MQ=255) tACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGGAGTGCATTGCCGCCGGGCTGCTCTCTGCCAGGTCCa > 1:974672/1‑150 (MQ=255) aCCGACCCTGTGGGAGCGGGCAGGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAg < 1:2402928/150‑1 (MQ=255) aCCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAg > 2:798240/1‑150 (MQ=255) ccGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAgg < 1:7296469/150‑1 (MQ=255) cGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAggg > 1:3557601/1‑150 (MQ=255) cGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAggg > 2:7513801/1‑150 (MQ=255) aaCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGcc > 1:6342331/1‑150 (MQ=255) aCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCACGCGCCAGGCACAAAAATCGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGGCCAGGGCcg > 1:198563/1‑150 (MQ=255) | CGTCGAGCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGG‑CATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGC‑TGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCG > NC_002947/867836‑868131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |