BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	876,018	G→C	5.9%	noncoding (105/142 nt)	PP_mr65 ←	YybP‑YkoY

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	876,018	0	G	C	5.9%	2348.4 / 92.5	692	noncoding (105/142 nt)	PP_mr65	YybP‑YkoY
Reads supporting (aligned to +/- strand): ref base G (354/297); new base C (24/17); total (378/314)
Fisher's exact test for biased strand distribution p-value = 6.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 698 total aligned reads displayed.

GTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGTTTTTTAT  >  NC_002947/875869‑876166

           cAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCAtggt                                                                                                                                           >  2:4969055/1‑150 (MQ=255)

           cAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCACGCCTGCAtgga                                                                                                                                           <  1:8011498/150‑2 (MQ=255)

            aGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCAtggtg                                                                                                                                          <  2:8520763/150‑1 (MQ=255)

            aGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGAGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCAtggtg                                                                                                                                          >  1:4467069/1‑150 (MQ=255)

             gTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCAtggtgg                                                                                                                                         >  2:2445187/1‑150 (MQ=255)

                 ttCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCg                                                                                                                                     >  1:1458088/1‑150 (MQ=255)

                   ccAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCa                                                                                                                                   <  2:2683455/150‑1 (MQ=255)

                    cAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCAc                                                                                                                                  >  1:3437626/1‑150 (MQ=255)

                    cAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCAc                                                                                                                                  >  1:5477448/1‑150 (MQ=255)

                        aTCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGTCACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACgcgc                                                                                                                              >  2:8745617/1‑150 (MQ=255)

                        aTCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACgcgc                                                                                                                              <  2:3805254/150‑1 (MQ=255)

                         tCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGcc                                                                                                                             >  2:7110586/1‑150 (MQ=255)

                         tCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGcc                                                                                                                             >  1:8569791/1‑150 (MQ=255)

                          cAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCa                                                                                                                            <  1:1349376/150‑1 (MQ=255)

                           aGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCAt                                                                                                                           <  2:7369995/150‑1 (MQ=255)

                            ggATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATg                                                                                                                          >  1:6064413/1‑150 (MQ=255)

                                tCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCt                                                                                                                      <  1:162223/150‑1 (MQ=255)

                                tCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCt                                                                                                                      <  2:2146723/150‑1 (MQ=255)

                                 ccTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtg                                                                                                                     <  2:1113425/150‑1 (MQ=255)

                                  cTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgt                                                                                                                    <  1:4211857/150‑1 (MQ=255)

                                  cTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgt                                                                                                                    <  1:2553732/150‑1 (MQ=255)

                                   tACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgtg                                                                                                                   >  2:5954415/1‑150 (MQ=255)

                                   tACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgtg                                                                                                                   >  1:7548573/1‑150 (MQ=255)

                                   tACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgtg                                                                                                                   >  1:8774059/1‑150 (MQ=255)

                                   tACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgtg                                                                                                                   <  1:4045900/150‑1 (MQ=255)

                                   tACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTAAGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgtg                                                                                                                   <  2:5450599/150‑1 (MQ=255)

                                    aCGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTgg                                                                                                                  <  1:642806/150‑1 (MQ=255)

                                       ggggCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCGGGGTCCGGTGTGCGTGGCATAGGTCGTGTCAAACCCTCGTTCCGTCTATGCGGATCTCTCCATGCTGGCGTGGCGGGTGGGTCGCGCGCGCCATGGTCTGTGGAcc                                                                                                               >  1:2783593/1‑150 (MQ=255)

                                        gggCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCa                                                                                                              >  2:2911742/1‑150 (MQ=255)

                                         ggCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCaa                                                                                                             <  2:31982/150‑1 (MQ=255)

                                             ggTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTAt                                                                                                         <  1:4300055/150‑1 (MQ=255)

                                             ggTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTAt                                                                                                         <  2:79403/150‑1 (MQ=255)

                                                   cacGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGAc                                                                                                   <  2:2813258/150‑1 (MQ=255)

                                                    acGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGAcg                                                                                                  >  1:1730924/1‑150 (MQ=255)

                                                      ggCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGAcgcg                                                                                                >  2:470314/1‑150 (MQ=255)

                                                        cTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTa                                                                                              <  1:3340980/150‑1 (MQ=255)

                                                           tGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCg                                                                                           >  2:6199195/1‑150 (MQ=255)

                                                             acacGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCggg                                                                                         >  2:5572182/1‑150 (MQ=255)

                                                               acGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCg                                                                                       >  2:351160/1‑150 (MQ=255)

                                                                 gTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAg                                                                                     >  2:6074335/1‑150 (MQ=255)

                                                                  tACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGc                                                                                    <  1:8283940/150‑1 (MQ=255)

                                                                  tACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGc                                                                                    >  1:4598636/1‑150 (MQ=255)

                                                                     aGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTgg                                                                                 <  2:1231359/150‑1 (MQ=255)

                                                                     aGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTgg                                                                                 <  1:6672483/150‑1 (MQ=255)

                                                                     aGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTgg                                                                                 <  1:5054422/150‑1 (MQ=255)

                                                                       ccTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGt                                                                               >  2:6147635/1‑150 (MQ=255)

                                                                       ccTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGt                                                                               >  1:8181393/1‑150 (MQ=255)

                                                                           cccgccccgGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTc                                                                           >  2:1288478/1‑150 (MQ=255)

                                                                           cccgccccgGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTc                                                                           >  1:7054919/1‑150 (MQ=255)

                                                                            ccgccccgGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTcg                                                                          >  1:7378594/1‑150 (MQ=255)

                                                                            ccgccccgGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTcg                                                                          >  2:4498699/1‑150 (MQ=255)

                                                                             cgccccgGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTcgc                                                                         >  1:236632/1‑150 (MQ=255)

                                                                              gccccgGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTcgcg                                                                        >  1:2928886/1‑150 (MQ=255)

                                                                               ccccgGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGTGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCgg                                                                       <  2:5070248/150‑1 (MQ=255)

                                                                               ccccgGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGTGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCgg                                                                       <  2:1555754/150‑1 (MQ=255)

                                                                                 ccgTGTTAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGTCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGga                                                                     <  1:871393/150‑1 (MQ=255)

                                                                                      tAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGacta                                                                <  2:6389036/150‑1 (MQ=255)

                                                                                         ggTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTc                                                             <  1:530770/150‑1 (MQ=255)

                                                                                          gtgtGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTcc                                                            >  1:1161570/1‑150 (MQ=255)

                                                                                          gtgtGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTcc                                                            >  2:2016760/1‑150 (MQ=255)

                                                                                            gtgCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTcccc                                                          <  1:3079239/150‑1 (MQ=255)

                                                                                                     aTAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGt                                                 >  1:7208116/1‑150 (MQ=255)

                                                                                                     aTAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGt                                                 >  2:7041833/1‑150 (MQ=255)

                                                                                                      tAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTg                                                <  1:7769173/150‑1 (MQ=255)

                                                                                                      tAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTg                                                <  1:1004848/150‑1 (MQ=255)

                                                                                                      tAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTg                                                >  1:5978825/1‑150 (MQ=255)

                                                                                                       aGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGc                                               <  1:6937058/150‑1 (MQ=255)

                                                                                                       aGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGc                                               >  1:5649745/1‑150 (MQ=255)

                                                                                                         gTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCgg                                             <  2:1000505/150‑1 (MQ=255)

                                                                                                            ttGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGAtt                                          >  2:3375577/1‑150 (MQ=255)

                                                                                                                 aaaCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGGTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGcc                                     >  2:8275953/1‑150 (MQ=255)

                                                                                                                   aCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTa                                   <  1:2327970/150‑1 (MQ=255)

                                                                                                                   aCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTa                                   >  1:1914486/1‑150 (MQ=255)

                                                                                                                   aCCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTa                                   <  1:5782250/150‑1 (MQ=255)

                                                                                                                    cccTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAg                                  <  1:7700944/150‑1 (MQ=255)

                                                                                                                     ccTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAgg                                 <  2:519065/150‑1 (MQ=255)

                                                                                                                      cTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGc                                >  2:4133180/1‑150 (MQ=255)

                                                                                                                      cTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGc                                <  2:5728835/150‑1 (MQ=255)

                                                                                                                        cGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCaa                              >  1:4886372/1‑150 (MQ=255)

                                                                                                                         gATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCgg                                                                       <  1:8115956/108‑1 (MQ=255)

                                                                                                                         gATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCaaa                             <  2:6687242/150‑1 (MQ=255)

                                                                                                                          aTCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCaaaa                            <  2:7740298/150‑1 (MQ=255)

                                                                                                                            ccGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACg                          >  1:7493387/1‑150 (MQ=255)

                                                                                                                              gTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGtt                        >  1:5100164/1‑150 (MQ=255)

                                                                                                                                 tATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTc                     >  1:2129201/1‑150 (MQ=255)

                                                                                                                                      ggATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCac                >  2:42913/1‑149 (MQ=255)

                                                                                                                                       gATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGac                                                                  >  2:2555781/1‑99 (MQ=255)

                                                                                                                                       gATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAg               <  2:2973274/150‑1 (MQ=255)

                                                                                                                                          ctctcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAgcgc            >  2:585148/1‑150 (MQ=255)

                                                                                                                                           ccaccATGCACGCCTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCt           >  2:8105801/4‑150 (MQ=255)

                                                                                                                                            ctcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAgg                                 >  2:400101/1‑127 (MQ=255)

                                                                                                                                            caccATGCACGCCTGCATGGAGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTg          >  1:6234027/3‑150 (MQ=255)

                                                                                                                                             tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGt         >  2:1864334/1‑150 (MQ=255)

                                                                                                                                             tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGt         >  1:4996252/1‑150 (MQ=255)

                                                                                                                                             tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGt         >  2:8693108/1‑150 (MQ=255)

                                                                                                                                             tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGt         >  1:3519847/1‑150 (MQ=255)

                                                                                                                                             tcCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGt         <  1:3664172/150‑1 (MQ=255)

                                                                                                                                             accATGCACGCCTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGt         >  2:3711786/2‑150 (MQ=255)

                                                                                                                                                   cAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGTTTTTTa   <  2:688753/150‑1 (MQ=255)

                                                                                                                                                   cAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGTTTTTTa   <  1:3781563/150‑1 (MQ=255)

GTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGGGAGACTACTCCCCTAGGACGGTGCGGATTCTGCCTAGGCAAAACGTTTTCGGCAAGCGCTGTTTTTTAT  >  NC_002947/875869‑876166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`