| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 883,878 | A→T | 6.3% | intergenic (+113/‑215) | PP_0766 → / → PP_0767 | hypothetical protein/LuxR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 883,878 | 0 | A | T | 6.3% | 878.2 / 5.0 | 301 | intergenic (+113/‑215) | PP_0766/PP_0767 | hypothetical protein/LuxR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (145/125); new base T (6/18); total (156/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.51e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 309 total aligned reads displayed.
CCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCG > NC_002947/883729‑884026 | ccAGCCCGCTGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTa < 2:2863051/150‑1 (MQ=255)ccAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTa < 2:7868813/150‑1 (MQ=255)ccAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTa < 1:5517796/150‑1 (MQ=255)ccAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTa < 1:2509314/150‑1 (MQ=255)ccAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTa < 2:2261747/150‑1 (MQ=255) aGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGCACCCGCGCCGACAGGTTCCGCGGGAgg > 2:7696056/1‑150 (MQ=255) ttgaaGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCGCCGACAGGGTCCGCGGGAGGGGc > 2:4138710/5‑150 (MQ=255) ccGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGc < 2:5888372/150‑1 (MQ=255) ccGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGc < 1:7081520/150‑1 (MQ=255) cGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCg < 2:6672059/150‑1 (MQ=255) cGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCg < 2:7009116/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 2:2623252/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 2:1552473/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 2:5556309/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 1:8548248/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 2:5092645/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 1:1008607/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 1:8481238/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 1:825119/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 1:725727/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 1:5738992/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 2:834617/150‑1 (MQ=255) gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCgg < 1:4113707/150‑1 (MQ=255) cAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCggg < 1:3930127/150‑1 (MQ=255) aGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGt < 2:5029630/150‑1 (MQ=255) aGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGt < 1:2180029/150‑1 (MQ=255) cTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGGTTCCGCGGTAGGAGCGGGTTCAc < 2:7712613/150‑1 (MQ=255) tGCGTCAGGCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGTACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGGTTCCGCGGTAGGAGCGGGTTCAcc < 2:1298337/150‑1 (MQ=255) gTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCcgc < 1:4926182/150‑1 (MQ=255) tCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGGAACCCCACCAAAAAGTTGCGCGGGAGGAGCCGGTTGACCcgcc > 2:3709700/1‑149 (MQ=255) cggcGGGTATCGGCTACGCTGAAATCACTGAACGCCGTGTGAGCCCCAGACCGCCCGGGCTCGCCGGGGCGTTTATATTTCCTGACCCGGCCTCTTCGGGGGTGAACCCGCTCATCCCGCGGAACCTGTAGGAGCGGGTTCACCCGCGaa < 2:1714751/147‑1 (MQ=18) gTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCGACAGGTTCCGCGGTAGGAGCGGGTGCACCCGCGAag > 2:8588982/1‑150 (MQ=255) ggtttttCGCTACGCTGAAATCACTTACCGCCGTTTGATCCCCACAACGCCCCGGCTCGCCGGGGCTTTTCTATTTCCTGACCCGGCCTCTTCGGGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGTGCGGTTTCACCCGCGAAGA‑gg < 2:7570044/145‑1 (MQ=255) ttCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGTACCCGCTCCGACAGGTTGCGCGGGAGGTGCGGGTTCACCCGCGCAGT‑GGCCggg > 1:7976927/1‑150 (MQ=255) tGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCGTCGCGGGTGTACCCCCACCAGCAGGGTGCGCGGTGGGTGCCGGGTGACCCGCGCAGA‑GGCCGggccaggcacac > 1:718912/1‑147 (MQ=255) cTGACCGCGGTGTGATCCCCAGACCGCCCCGGCTCGCCGGGGGGTTTCTATTTCCTGACCCGGCCTCTTCGCGGTTGAACCCGCTCCTACCGGTTCGGCGGTAGGAGGGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAAcctcct < 2:1900329/150‑1 (MQ=37) aaCGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAAACCCCGCCAACAGGTTACGCGGTTGGAGCGGGGTCACCCCCGAAGA‑GGCCGGGCAAGGCAAACAACCACCAGaa > 2:4741597/1‑150 (MQ=255) aaCGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGGGAACCCGCGCCGACAGGTTCCGCGGGTGGAGCGGGGTCCCCCCCGGACG‑GGGCGGGCAAGGCAATCAAACTACAGaa > 2:6226373/1‑150 (MQ=255) gtgtGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTGGGGGGTGAACCCGCTCCTACTGGTTCGGGGGTAGGAGGGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACctc < 2:7048821/150‑1 (MQ=39) gttacccccACACCGCCCCGGCTCGCCGGGGCTTTTCTTTTTCCTGACCCGGCCTCTTCGGGGGTTACCCCGCTCCTACCGGTTCCGCGGTTGGTGCGGGTTAACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCtctc < 1:2119696/145‑1 (MQ=255) ccccAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAAACCCCACCGACCGGGTGCGCGGTAGGAGCGGGGTGCCCCGCCAAGA‑GGGCGGGCCAGGCCATCAACCCCCAGAATAACACGCCAAAc > 2:3974453/1‑150 (MQ=255) gaccGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCg < 2:5771813/147‑1 (MQ=255) gCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGTACCCGCGCCGACAGGGTCCCCGGGAGGAGCGGGTTCACCCGCGGCGA‑GGCCGGGCCACGCAATCAACCACCGGAAAAACTCGCCCAAcccccccccc > 2:2937232/1‑150 (MQ=255) gCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCCCGGGTGAACCCGCTCCTCAACGTTCCGCGGTAGGAGCGGGGTGACCCCCGAACA‑GGCCCGGCAACGCAAGCAACCGCCAGAAAACCACACCAAAcccccccccc > 2:6133858/1‑150 (MQ=255) cccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCGACAGGTTCCGCGGGAGGAGCGGGTTCACCCCCGCAGC‑GGCCGGGCCAGGCCCGCAACCGCCGGAAGACCGCTCCAAAACCCCGCCCCAg > 2:8236454/1‑150 (MQ=37) ggCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCGTCGCCGGGGTAACCCCCCCAACACGGTGCGCGGGGGGAGCGGGGTGACCCCCCCAGAGGGCCGGGCACGCCAAAAACCCCCCGGAAAACACACCCAAAcccccccccccccc > 2:8090503/1‑146 (MQ=255) gtcGTTTATTTTTCCTCCCCCGGCATCGTCGGGGGTGACCCCGCTCCTACTGTTCCGGCGGTTGGTGGGGTTCCCCCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCa < 1:6211128/148‑1 (MQ=255) ggattttCTATTCCCGCACCCGGCATCTTCGGGTGTTAACCCGCTCCTAAAGGTCCCGCGGTTGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCa < 1:694213/146‑1 (MQ=255) aTTTCCTGCCCCGGCCTCTTCGCGGGGGAACCCGCTCCTACCGGGTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTg < 2:5233858/150‑1 (MQ=255) tCCTGACCCGGCCTCTTCGCGGGTTAACCCGCTCCTACCGGTTCCGCGGTTGGTGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCtt < 1:7834911/150‑1 (MQ=255) ccttgcccGGCCTCTTCGCGGGTGAACCCCCTCCGACCCCGGAACCCGTAGGAGCGGGGTCACCCCCGCAGA‑GGCCGGGCAAGGCCATCAACCTCCGGAATACCGCACCAAACCCCCGCCCCAGCCCCAGTCCATCAGCCAGGTTGCgtt > 2:5367930/6‑150 (MQ=12) tGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACCGGTTCCGCGGTTGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCttttt < 2:6819754/150‑1 (MQ=255) tGACCCGGCCTCTGCGCGGGTGAACCCGCTCCTACAGGTTCCGGGGTAGGAGCGGTTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCttttt < 2:3177056/150‑1 (MQ=255) ggCCTCTTGGGGTGTCACCCCCCTCCCACAGTTGCGGGGGTAGTCGGGGGAGAACCCGCTAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCa < 1:3418843/150‑1 (MQ=255) ggCCTCTTCGCGGGTGAACCCGCTCCTACCGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCa < 2:7088430/150‑1 (MQ=255) ccTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAAACCCCGCCCCAGCCCCAGTCCATCAGCCATGTTGCTTTTTGTCGCAGt > 2:615666/1‑150 (MQ=255) ttCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCCATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCAGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCtgt > 2:3455207/1‑148 (MQ=255) cgcgGGTGAACCCGCTCCTCCCGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTc < 2:1352475/150‑1 (MQ=255) gcgGGTGAACACGCTCCTACAGGTTCCGCGGTAGGAGAGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCACTCAAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCTCAGTCTTTTcc > 2:243460/1‑150 (MQ=255) gggTGAACCCGCTCCTACCGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCcgc < 2:6046198/150‑1 (MQ=255) gTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCgcgc > 1:6880807/1‑150 (MQ=255) tGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGcc > 1:7738374/1‑150 (MQ=255) aCCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTAt > 2:1237035/1‑150 (MQ=255) cccGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTAtt > 2:3322605/1‑150 (MQ=255) cccGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTGTTCCGCGCCTAtt > 1:1941959/1‑150 (MQ=255) ccGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTg > 2:564695/1‑150 (MQ=255) ccGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTg > 1:1067610/1‑150 (MQ=255) ccGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTg > 2:443381/1‑150 (MQ=255) ccGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTg > 1:1412450/1‑150 (MQ=255) ccGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTg > 1:3203295/1‑150 (MQ=255) ccGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTg > 1:7648537/1‑150 (MQ=255) cGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTgc < 2:6515137/150‑1 (MQ=255) gCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTgcg > 1:2228272/1‑150 (MQ=255) gCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTgcg > 1:6586518/1‑150 (MQ=255) tCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCAt < 2:4901468/111‑1 (MQ=255) cTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGggcaagg > 2:7337317/1‑51 (MQ=255) cTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCca > 2:8493186/1‑150 (MQ=255) tACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTCTTGCGCCcat > 2:8682665/1‑150 (MQ=255) tACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGcccct > 1:2582318/1‑148 (MQ=255) tACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGcccct > 1:4311879/1‑148 (MQ=255) tACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCcat > 2:7965485/1‑150 (MQ=255) tACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCcag > 1:6994071/1‑149 (MQ=255) tACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTATGTCGCAGTCTTTTCCGCGCCTATTGCGcccct > 1:6786937/1‑148 (MQ=255) aCAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAATCCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTGGCTGTCTTTTCCGCGCGTATTGCGccgttg > 2:1057044/1‑146 (MQ=255) aCAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCcctc > 1:1239106/1‑150 (MQ=255) cAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCcatca > 1:7436210/1‑150 (MQ=255) tggTTCCGCGGTCGGTGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATCGCGCCcatcat < 2:1745701/149‑1 (MQ=255) ggTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCatcatc < 2:4559844/150‑1 (MQ=255) gTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCCTCATCt > 1:590926/1‑150 (MQ=255) gTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCt > 2:1478479/1‑150 (MQ=255) gTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCt > 1:1918650/1‑150 (MQ=255) gTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCGATTGCGCCCCTCATCt > 2:2743941/1‑150 (MQ=255) ttCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCGCATCATCtt > 1:4463628/1‑150 (MQ=255) gcgGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCGCCTCATCTTCaaa > 1:474543/1‑150 (MQ=255) gcgGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCcaa > 1:8604152/1‑150 (MQ=255) gcgGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCaaa > 1:2915837/1‑150 (MQ=255) gcgGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCaaa > 1:8728206/1‑150 (MQ=255) gcgGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCaaa > 1:484725/1‑150 (MQ=255) cgGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAAt < 2:2722896/150‑1 (MQ=255) tAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCCTCATCTTCAAATgcg > 1:6366796/1‑150 (MQ=255) | CCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGA‑GGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCATCTTCAAATGCG > NC_002947/883729‑884026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |