| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 955,154 | G→A | 20.9% | intergenic (+105/‑208) | cyoE → / → alaC | protoheme IX farnesyltransferase/aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 955,154 | 0 | G | A | 20.9% | 822.8 / 216.6 | 411 | intergenic (+105/‑208) | cyoE/alaC | protoheme IX farnesyltransferase/aminotransferase |
| Reads supporting (aligned to +/- strand): ref base G (157/164); new base A (37/48); total (194/217) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.82e-04 | |||||||||||
Only 100 of 421 total aligned reads displayed.
GACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGCC > NC_002947/955005‑955303 | gACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAgg < 2:1708323/150‑1 (MQ=255) aCAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGt < 2:5020116/150‑1 (MQ=255) aCAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGCAAACCCGCTCCTACAAGGt > 2:2738402/1‑150 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTc < 1:8238716/150‑1 (MQ=255) ccAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCt < 2:8602627/150‑1 (MQ=255) ccAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCGACAAGGTTCCt > 2:5268511/1‑150 (MQ=255) gACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTa < 2:8326774/150‑1 (MQ=255) gACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTa < 2:8146751/150‑1 (MQ=255) gACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTa < 1:6809255/150‑1 (MQ=255) gACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTa < 1:2790856/150‑1 (MQ=255) gACCGCCGCGGATGTGCTGAGGACCTCCGCCCGCTGACACTGCGGCCTGTGTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑ATTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTa < 2:5691940/150‑1 (MQ=38) aCCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAg < 1:320048/150‑1 (MQ=255) ccGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAgg < 2:6625990/150‑1 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGTAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGc < 2:6502237/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGc < 1:7523382/150‑1 (MQ=38) tGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGc < 1:7251919/150‑1 (MQ=37) tGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCgg < 2:2791005/150‑1 (MQ=25) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGTCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTTCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 1:6380271/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCgg < 1:4018328/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCgg < 2:5992223/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 1:1815863/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 1:6721747/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGACGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 2:2407181/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCggg < 2:3824404/150‑1 (MQ=38) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCggg < 2:4356105/150‑1 (MQ=38) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCggg < 2:6381034/150‑1 (MQ=38) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCggg < 2:3034314/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCggg < 1:5496723/150‑1 (MQ=255) cGGATGTGCTGATGACCGACGCACGCTGAAACTGCGGCCTGTTTCACGAAAACCCCGGCCACGGT‑GCCGGGG‑TTTTTTTTTGGGGGTCTTTTGCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACCGGAACCTTGTAGGAGCggg < 2:8787656/150‑1 (MQ=25) cGGAGGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTTGGGGGTATTTTTCCTGGGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 2:4030943/150‑1 (MQ=255) ggATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCGGGt < 2:751066/150‑1 (MQ=37) ggATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGt < 1:8484089/150‑1 (MQ=255) gCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTAcc < 1:4953000/150‑1 (MQ=255) ccTACGCACGCTTAAACTGCTGCCTTTTTAACGAAAACCCCGGCCACTGT‑GCCGGGT‑TTTTTTTTTGGGGTTTTTTTTCCTGTGCGGGCCTCTTCGC‑GGGTAAACCCGCTCCTACATGGTTCCTGTAGGTGGGGTTTTACCCGCGAagag < 2:3702881/150‑1 (MQ=37) cTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTAAAAGGTTGCTGTAGGAGCGGGTTTAACCCCGAAGAgg > 2:4738864/1‑150 (MQ=255) cTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGGAAACCCCCGCCGACAAGGTGGCGGGAGGAGCGGGGTTACCCGCGCAGAgg > 2:4565795/1‑150 (MQ=255) tACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCGCCGACAAGGGTCCGGGAGGAGCGGGTTTACCCGCGAAGAGGc > 1:8747581/1‑150 (MQ=38) cgcacgcTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGGAAAACCGCTCCGACAAGGGTCGGGGAGGGGCGGGGTTAACCGCGGAGAgggcc > 1:1306187/1‑147 (MQ=255) gcTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTTAACCCGCTCCTACAGGAACCTTGTTGGAGCggg < 1:1729125/126‑1 (MQ=25) cctgcggCCTGTGACACGAAAACCCCGGCCCCGGG‑GCGGGGT‑TTTTTTTTTGGGGGTTTTTTACCTGGGCCGGCAACTCCGC‑GGGTAAACCCGCTCCTACACGGTTCCTGTCGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑Gaaaaa < 1:3633301/149‑1 (MQ=21) aCTGCTGCCTGTGACACGAACACCCCGGCCACTGT‑GCCGGGG‑TATTTTTTGGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAACCCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑Gaaaaa < 2:5390547/150‑1 (MQ=37) ctgcCTGTTTCACGAAACCCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCGC‑GGGTAAACCCGCTCCTCCAGGAACATTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGaaaaatacc < 2:4302060/150‑3 (MQ=14) ccTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCGCCAACAAGGTTGCGGTTGGTGCGGGGTTTCCCGCGTAGAGGCCCGCCCA‑Ggcaaataaaaat > 2:1798857/1‑150 (MQ=255) tGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCgg < 1:5073784/110‑1 (MQ=25) tttCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTc < 2:5630411/96‑1 (MQ=255) aaCCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCTGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCgg < 1:7609639/99‑1 (MQ=18) aaCCCCGG‑CACAGTGGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTGAAACCCCGCCAACAAGGTTGCGGGAGGTGCGGGTTTTACCCCCCAGAAGCCAGCACA‑CAAAAAAAAAAATAACAGAATTTaaa > 1:2063236/1‑150 (MQ=255) ccccGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAAACCGCTCCTACAAGGTTGCGGTAGGAGCGGGTTTACCCGCGCAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTGaaaa > 2:5579092/1‑150 (MQ=38) ccGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGGTAAACCC‑CGACGACAACGGTGCGGTGGGAGCCGGGTTTCCCCCGCAGAGGCCCCCCCA‑GAAAAAAAAAAATACCAGATTTTAaaaaaa > 1:7132738/1‑150 (MQ=255) ccGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCaaaaaa > 2:5098729/1‑150 (MQ=255) ggCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATa > 2:8082273/1‑150 (MQ=255) cACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑CGGTAAAACCGCACCAACAAAGTTAAGGGAGGAGCGGGTTTACCCCCCAACAGGCCAGCAAA‑GCAAAAAAAAAATACCAGAATTTAaaaaaaaaaaa > 1:7928002/1‑145 (MQ=255) aCTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACCAGGTTCCGGGAGGAGCGGGGTTACCCGCGAAGAGGCCCGCCCA‑GAAAAATAAAAATACCTGATTTTGAAAAAATAGATc > 2:7270316/1‑150 (MQ=37) gg‑TTTTTTTTTGGGGGTATTTTTCCTGTGCGGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGTTACCTGTCGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTc < 1:8583000/150‑1 (MQ=255) gg‑TTTTTTTTGGGGGGTATTTTTCCGGTGCCGGCCTCGGCGC‑GGGAAACCCCGCACCTCCACGGTTCCTGTAGGCGCGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTc < 1:577542/150‑1 (MQ=255) ttttttttGGGGTTATTTTTCCTGTGCCGGCCTCTTCGC‑GGTTAAACCCGCTCCAACAAGGTTCCTGTCGGAGCGGGTTAACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCtaa < 2:2205830/150‑1 (MQ=38) ttttttcgGGGGGTATTTGGCCTGCGCCGGCCTCTTCGC‑GGGTAACCCCGCCCCTACCAGGTTCCTGTCGGAGCGGGTTTCCCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCtaa < 2:4802189/150‑1 (MQ=37) gggtTATTTTTCCTGTGCGGGCCTCTTGGC‑GGGAAAACCCGCTCCTACATGGTTCGTGTTGGTGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAgg < 1:4257158/150‑1 (MQ=37) ggTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTATAATAAAACAGGaa > 2:5846366/1‑150 (MQ=255) gTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGaaa < 2:8565984/150‑1 (MQ=255) gccTGTGCCGGCCTCTTCGC‑GGTTAAACCCGCTCCTCCATGGTGCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCt < 1:603710/149‑1 (MQ=38) ccTGGGCCGGCCTCTTCGC‑GGGTAAACCGGCTCCTACACGGTTCCTGTAGGTGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCtt < 2:2559593/150‑1 (MQ=255) ggtgCCGGCCCCTCCGC‑GGGTAAACCCGCCCCAACACGGTGCGTTTAGGAGGGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTa < 1:6184785/149‑1 (MQ=255) gCCTCTTCGC‑GGGTAAACCCGCTCCTACCCGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCAt < 2:6981406/150‑1 (MQ=255) cgc‑gGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGttt < 2:7936580/150‑1 (MQ=255) c‑gGGAAAACCCGCTCCTACAAGGTTCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCg < 2:7595259/150‑1 (MQ=255) gggAAAACCCGCCCCTACAAGGTTCCTTTAGTAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCgg < 1:5572759/150‑1 (MQ=255) gTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAACTTATCCTTTACAGGCATCCTGTTTCGGCa > 2:6779707/1‑150 (MQ=255) tAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCAc > 1:5622385/1‑150 (MQ=255) cccGCTCCTCCCCGGTCCCGTTCGGCGCGGTTTAACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc < 1:4565795/150‑1 (MQ=255) cccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 2:1997432/1‑150 (MQ=38) cccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:3709299/1‑150 (MQ=255) cccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:2629324/1‑150 (MQ=255) ccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:3583686/1‑150 (MQ=38) ccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:971012/1‑150 (MQ=38) ccGCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:122773/1‑150 (MQ=38) ccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:1001604/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:6608016/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:7028271/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:3123788/1‑150 (MQ=255) ccGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTGCTAATAAAACAGGAAATTATCCTTAACAGTCATCCTGTTTCGGCACTAtct > 1:881742/1‑150 (MQ=255) gCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACA‑GGAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 2:1647905/1‑150 (MQ=37) gCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 1:2915543/1‑150 (MQ=37) gCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 2:4105862/1‑150 (MQ=38) gCTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 2:7026870/1‑150 (MQ=38) gCTCCTACACGGTTCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAGAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc < 2:1099974/150‑1 (MQ=255) gCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAACCAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc < 2:8747581/150‑1 (MQ=255) gCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 1:7760951/1‑150 (MQ=255) tCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTg > 1:5329623/1‑150 (MQ=255) tCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTg > 1:994714/1‑150 (MQ=255) ctccccggTTCCTGTCGGCGCGGGTTTCCCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAt < 1:4138247/144‑1 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:1413931/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:6327242/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTACTGAtt > 1:7372062/1‑150 (MQ=255) aCAAGGTTCCTGGCGGAGCGGTTTCCCCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTc < 1:1225808/150‑1 (MQ=255) attggTTCCTGTTGTTGCGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa < 1:385033/147‑1 (MQ=255) aaGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 2:7821104/1‑150 (MQ=255) aaGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 1:242069/1‑150 (MQ=255) aaGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 2:3730959/1‑150 (MQ=255) gTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgcc > 2:3298086/1‑150 (MQ=255) | GACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGCC > NC_002947/955005‑955303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |