| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 955,158 | C→T | 22.2% | intergenic (+109/‑204) | cyoE → / → alaC | protoheme IX farnesyltransferase/aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 955,158 | 0 | C | T | 22.2% | 738.1 / 213.0 | 404 | intergenic (+109/‑204) | cyoE/alaC | protoheme IX farnesyltransferase/aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (151/158); new base T (37/48); total (194/210) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.54e-02 | |||||||||||
Only 100 of 407 total aligned reads displayed.
CCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGCCGCCA > NC_002947/955010‑955307 | ccAGACCGCTGCGGATGTGCTGATGACCTTCGCTCGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCt < 2:4413610/150‑1 (MQ=255)ccAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCt < 2:3083816/150‑1 (MQ=255) aGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGt < 1:3528088/150‑1 (MQ=255) gACCGCTGCGGATGTGCTGATGACCTACGCACTCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCTGTT‑TTTTTTTTTGGCGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTa < 2:5691683/150‑1 (MQ=39) gACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTa < 2:8326774/150‑1 (MQ=255) gACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTa < 2:8146751/150‑1 (MQ=255) gACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTa < 1:2790856/150‑1 (MQ=255) cGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGa < 1:3815683/150‑1 (MQ=255) cGCTGCGGATGTGCTGATGACCGACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACGGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTGTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGa < 2:1662010/150‑1 (MQ=255) gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCt > 1:831353/1‑143 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGc < 2:6917361/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGc < 1:7523382/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGc < 2:407157/150‑1 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAgat > 2:6451452/1‑148 (MQ=25) cTGCGGATGTGCTGATGACCTACGCACGATGAAACTGCTGCCTGTTTCAAGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGc < 1:900009/150‑1 (MQ=255) tGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGc < 1:7252493/150‑1 (MQ=37) gCGGATGTGCTGATGACCTACGCACGCTTAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGTGG‑TTTTTTTTTGGGTGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 1:976366/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCgg < 1:6288793/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCgg < 2:6678646/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCgg < 1:5584584/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCgg < 1:4018328/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 2:2447721/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 1:6181663/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 2:4566225/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCggg < 1:715037/150‑1 (MQ=25) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCgg < 1:3153873/150‑1 (MQ=37) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCggg < 2:474003/150‑1 (MQ=255) ggATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCggg < 1:50544/150‑1 (MQ=37) ggATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCGGGt < 2:751100/150‑1 (MQ=37) ggATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGt > 2:1157755/1‑150 (MQ=255) tACGCACGCTGAACCTGCGGCCTTTTTCACGAAACCCCCGGCCACTGT‑GCCGGGT‑TTTTTTTTTGGGGGTTTTTTGCCTGGGCCGGCCTCTCCGCGGGTAAACCGG‑CTCCTACCGGAACCTTGTTGGAGGGGGTTTACCCGCGAAGAGGc < 2:6278127/150‑1 (MQ=18) gcacgcTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTGAACCCC‑CGCCGAACAGGTTCCTGTAGGGGCGGGTGTGCCCCCGGAGAgggccg > 1:5630536/1‑146 (MQ=255) gcggAACCTGCTGCCTGTTCCACGAAAACCCCGGCCACTGG‑GCCGGGG‑TTTTTTTTTGGGGGTATATTTCCTGGGCCGCCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGcaca < 2:597087/147‑1 (MQ=37) aCTGCTGCCTGTTTCACGAACACCCCGGCCACTGT‑GCCGGGT‑ATTTTTTTTGGGGGTAATTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑Gaaaaa < 2:8565703/150‑1 (MQ=255) tGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCgg > 2:5073784/1‑110 (MQ=25) tGTTCCACCAACCCCCCGCCCACTGT‑GCGGGTG‑TTTTTTTTTGGGGGTATTTTTCCTGGGCCGCCCTCTGCGCGGGTAAACCCG‑CTCCTACACGGTTCCTGTAGCCGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATAc < 2:7410163/150‑1 (MQ=25) tCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGGTCCGGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACC‑GAAAAATAAAAATTCCTgc > 2:5603897/1‑149 (MQ=37) cACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGTTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGAt > 2:5481887/1‑150 (MQ=255) cACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCGCTTCGCGGGTTAAACCC‑CGCCGACAACGTTGCGGGGGGTGGGGGGTTAGCCGCGCACCGGCCCCCACA‑CCaaaaaaaaaatagaggat > 1:5343170/1‑144 (MQ=255) aaaaCCCCGG‑CACAGTGGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTGCGGGGGGGGCGGGGTTAACCGCGGAGTGGCCCCCACA‑GAAAAATAAAAATACCTGATTTTc > 1:8683453/1‑150 (MQ=25) aaCCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCTGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCgg > 2:7609639/1‑99 (MQ=18) aaCCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCTGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCgg < 1:7609639/99‑1 (MQ=18) aaCCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTAAAATGTTCCGGGATGAGCGGGTTTACCCGCGAAGTTGCCAGCACA‑GAAAAATAAAAATACCTGATTTTaaa > 2:1446079/1‑150 (MQ=38) aaCCCCGG‑CACAGTGGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTGAAACCC‑CGCCAACAAGGTTGCGGGAGGTGCGGGTTTTACCCCCCAGAAGCCAGCACA‑CAAAAAAAAAAATAACAGAATTTaaa > 1:2063236/1‑150 (MQ=255) aaCCCCGG‑CACAGTGGCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAATTAAAAATTCCTGATTTTcga > 2:8738835/1‑148 (MQ=25) aCCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGGTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCaaa > 2:6518196/1‑150 (MQ=255) ccccGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTGGCGGGTAAAACCC‑CGCCTACAAGGGTGCGGTAGGGGCGGGTTTAACCCCGAAGGGGCCAGCACC‑GAAAAAAAAAAAAAAAGGATTTTGaaaa > 2:3772140/1‑150 (MQ=255) ccccGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCaaaa > 2:8776286/1‑150 (MQ=255) cccGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAAACCG‑CGCCGAGAAGGTTCGGGTGGGTGCGGGGTTACCCGCCACTAGGCCAGCCCA‑GTAAAAAAAAAATACCTGATTTTCaaaaa > 2:2284982/1‑150 (MQ=255) ggCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATa > 2:8082273/1‑150 (MQ=255) cACTGG‑GCGGGGG‑TTTTTTTTTGGGGGTTTTTTTCGTGGGCCGGCCTCTTCGCGGGTAACCCCG‑CTCCAACACGGTGCCTGTAGGCGCGGTTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGAt < 2:53870/150‑1 (MQ=37) ggattttttttGGGGGTATTTTTCCTGTGCCGGCCGCTACGCGGGAAAACCCG‑CACCTACAAGGTTCCTGTAGGAGCGGGATTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTc < 2:4835718/147‑1 (MQ=38) gggtTATTTTTCCTGTGCGGGCCTCTTGGCGGGAAAACCCG‑CTCCTACATGGTTCGTGTTGGTGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAgg < 1:4257158/150‑1 (MQ=37) tttttCCTGTGCCGGCCTCGTCGCGGGGAAAACCC‑CGCCAACAAAGTTGCGGGAGGGGCGGGTTTTACCCCGCAGAGGCCCCCACA‑CAAAAAAAAAAAAAACCGATTTTGATAAAATAGAAAAGTAAAGTTATAAAAAAAAAGGGAAATa > 2:2940959/1‑150 (MQ=255) ttttCGTGTGCCGGCCTCTTCGCGGTTAACCCCG‑CTCCTACACGTTTCCTGTCGGCGGGGTTTAACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTAt < 1:6752261/150‑1 (MQ=255) tgtgCCGGCCTGTTCGCGGGTAAACCCG‑CTCCTCCAAGGTTCCTGTAGGAGCGGTTTTAACCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGACAAGTTCTAATAAAACAGGAAATTATCCTTTa < 2:4159288/150‑1 (MQ=255) cGGCCTCTTCGCGGGTAAACCCG‑CTCCTACACGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGc < 2:7004130/150‑1 (MQ=255) cGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGc < 1:7104003/150‑1 (MQ=255) ggCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCGGTCGGAGCGGGTTTACCCGCGAAGAGGCCCGCACC‑GAAACATAAAAATACCGGATTTTCAAAAAATAGATCTGAAAAGTTCGAATAAAACAGGAAATGATCCTGTACCGGCa > 2:5831104/1‑150 (MQ=37) ggCCTCTTCGCGGGTAAAACCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAAAAGGAAAATATCCTTTACAGGcc > 2:7031952/1‑149 (MQ=255) tctTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCGGTAGGAGCGGGGTTACCCGCGAAGAGGCCAGCCCA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGAGCTGAAAAGTGCTAATAAAACAGGACCTTATCCTTTACAGGccgccg > 2:1405880/1‑145 (MQ=37) tctTCGCGGGTAAACCCG‑CTCCACCAAGGGTCCAGTAGGAGCGGGGTTACCCGCGAAGAGGCCAGCCCA‑GTAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAAAAGGGAAATATCCGTTAAAGGCATccg > 2:3910897/1‑149 (MQ=37) ctTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCGTTACAGGCATCCTg > 2:3614665/1‑150 (MQ=255) ttCGCGGGTAAACCCC‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCACCACA‑GAAAAATAAAAATAACAGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAAAAGGAAATTAACCTTTACAGGCCTCCAGt > 2:1759064/1‑150 (MQ=37) cgcgGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGttt < 2:7936580/150‑1 (MQ=255) cgcgGG‑AAACCCGCCCCCTCCAGGGTGCGTGTCGGCGGGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGttt < 1:5268511/150‑1 (MQ=255) gggTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGTAAAGTTCTAATAAAACAGGAAATTATCCGTTACAGGCATCCTGTTTCgg > 1:6665146/1‑150 (MQ=255) gggTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGACATTATCCTTTACAGGCATCCTGTTTCgg > 2:5220757/1‑150 (MQ=255) cccG‑CTCCTCCCCGGTCCCGTTCGGCGCGGTTTAACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc < 1:4565795/150‑1 (MQ=255) cccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:2629324/1‑150 (MQ=255) cccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:3709255/1‑150 (MQ=255) ccG‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:1235984/1‑150 (MQ=38) ccG‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:5961491/1‑150 (MQ=38) ccG‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:6921093/1‑150 (MQ=38) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:8522463/1‑150 (MQ=255) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:7974320/1‑150 (MQ=255) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:1001604/1‑150 (MQ=255) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:8591213/1‑150 (MQ=255) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:1793218/1‑150 (MQ=255) cG‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtctt > 2:1036484/1‑150 (MQ=38) cG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtctt > 1:8785603/1‑150 (MQ=255) g‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtctt > 2:6337526/1‑150 (MQ=25) g‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 1:2915543/1‑150 (MQ=37) g‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACa < 1:1613866/108‑1 (MQ=255) g‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 1:7760951/1‑150 (MQ=255) g‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc < 2:2105776/150‑1 (MQ=255) g‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 1:5530572/1‑150 (MQ=255) g‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtcttc > 2:4346476/1‑150 (MQ=255) ctccccggTTCCTGTCGGCGCGGGTTTCCCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAt < 1:4138247/144‑1 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:278316/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 1:494512/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:2690094/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:1928033/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTACTGAtt > 1:7372062/1‑150 (MQ=255) cAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa > 1:1872983/1‑150 (MQ=255) aaGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 2:7821104/1‑150 (MQ=255) aaGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 1:242069/1‑150 (MQ=255) aaGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 2:3716532/1‑150 (MQ=255) aGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAgg > 2:3489078/1‑150 (MQ=255) gTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgcc > 2:3297984/1‑150 (MQ=255) | CCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACA‑GAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGCCGCCA > NC_002947/955010‑955307 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |